RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 A0A1W2PPH5 198 aa10.87□□□□□ -0.67
HDAC1-208ENST00000482310 A0A1W2PRD5 423 aa10.87□□□□□ -0.67
HDAC1-208ENST00000482310 A0A1W2PRF3 423 aa10.87□□□□□ -0.67
HDAC1-208ENST00000482310 A0A1W2PRM7 423 aa10.87□□□□□ -0.67
HDAC1-208ENST00000482310 A8MV72 311 aaPredicted RBP10.87□□□□□ -0.67
HDAC1-208ENST00000482310 ZNF728P0DKX0 622 aa10.87□□□□□ -0.67
HDAC1-208ENST00000482310 FOSL1P15407 271 aa10.87□□□□□ -0.67
HDAC1-208ENST00000482310 COX7A1P24310 79 aa10.87□□□□□ -0.67
HDAC1-208ENST00000482310 NFYBP25208 207 aa10.87□□□□□ -0.67
HDAC1-208ENST00000482310 MNDAP41218 407 aa10.87□□□□□ -0.67
HDAC1-208ENST00000482310 GUCA2AQ02747 115 aa10.87□□□□□ -0.67
HDAC1-208ENST00000482310 MEF2CQ06413 473 aaPredicted RBP10.87□□□□□ -0.67
HDAC1-208ENST00000482310 ZNF260Q3ZCT1 412 aa10.87□□□□□ -0.67
HDAC1-208ENST00000482310 BAIAP2L2Q6UXY1 529 aa10.87□□□□□ -0.67
HDAC1-208ENST00000482310 RFESDQ8TAC1 157 aa10.87□□□□□ -0.67
HDAC1-208ENST00000482310 LHX4Q969G2 390 aa10.87□□□□□ -0.67
HDAC1-208ENST00000482310 WDFY2Q96P53 400 aa10.87□□□□□ -0.67
HDAC1-208ENST00000482310 CALYQ9NYX4 217 aa10.87□□□□□ -0.67
HDAC1-208ENST00000482310 OR6C3Q9NZP0 311 aa10.87□□□□□ -0.67
HDAC1-208ENST00000482310 LPAR3Q9UBY5 353 aa10.87□□□□□ -0.67
HDAC1-208ENST00000482310 UBE2J1Q9Y385 318 aaPredicted RBP10.87□□□□□ -0.67
HDAC1-208ENST00000482310 IGHV3-43A0A0B4J1X8 118 aa10.86□□□□□ -0.67
HDAC1-208ENST00000482310 XRCC3O43542 346 aa10.86□□□□□ -0.67
HDAC1-208ENST00000482310 MMP23AO75900 390 aa10.86□□□□□ -0.67
HDAC1-208ENST00000482310 CLPXO76031 633 aa10.86□□□□□ -0.67
HDAC1-208ENST00000482310 IGHV3-7P01780 117 aa10.86□□□□□ -0.67
HDAC1-208ENST00000482310 GLAP06280 429 aa10.86□□□□□ -0.67
HDAC1-208ENST00000482310 IGHV3-43DP0DP04 118 aa10.86□□□□□ -0.67
HDAC1-208ENST00000482310 TALDO1P37837 337 aa10.86□□□□□ -0.67
HDAC1-208ENST00000482310 GDNFP39905 211 aa10.86□□□□□ -0.67
HDAC1-208ENST00000482310 PAX8Q06710 450 aa10.86□□□□□ -0.67
HDAC1-208ENST00000482310 DYNC1I2Q13409 638 aaKnown RBP10.86□□□□□ -0.67
HDAC1-208ENST00000482310 Q6ZPA2 131 aa10.86□□□□□ -0.67
HDAC1-208ENST00000482310 Q8N7P7 452 aa10.86□□□□□ -0.67
HDAC1-208ENST00000482310 ARL11Q969Q4 196 aa10.86□□□□□ -0.67
HDAC1-208ENST00000482310 DIRAS2Q96HU8 199 aa10.86□□□□□ -0.67
HDAC1-208ENST00000482310 SUCNR1Q9BXA5 334 aa10.86□□□□□ -0.67
HDAC1-208ENST00000482310 NXF2Q9GZY0 626 aaKnown RBP10.86□□□□□ -0.67
HDAC1-208ENST00000482310 SIRPDQ9H106 197 aa10.86□□□□□ -0.67
HDAC1-208ENST00000482310 GAL3ST2Q9H3Q3 398 aa10.86□□□□□ -0.67
HDAC1-208ENST00000482310 C12orf4Q9NQ89 552 aa10.86□□□□□ -0.67
HDAC1-208ENST00000482310 SVEP1Q4LDE5 3571 aa10.85□□□□□ -0.67
HDAC1-208ENST00000482310 ZNF729A6NN14 1252 aaPredicted RBP10.85□□□□□ -0.67
HDAC1-208ENST00000482310 SERPINE3A8MV23 424 aa10.85□□□□□ -0.67
HDAC1-208ENST00000482310 C12orf77C9JDV5 145 aa10.85□□□□□ -0.67
HDAC1-208ENST00000482310 INAFM1C9JVW0 142 aa10.85□□□□□ -0.67
HDAC1-208ENST00000482310 FCGR3AP08637 254 aa10.85□□□□□ -0.67
HDAC1-208ENST00000482310 GSTP1P09211 210 aaKnown RBP10.85□□□□□ -0.67
HDAC1-208ENST00000482310 GATA3P23771 443 aa10.85□□□□□ -0.67
HDAC1-208ENST00000482310 DLX6P56179 175 aa10.85□□□□□ -0.67
HDAC1-208ENST00000482310 C17orf58Q2M2W7 97 aa10.85□□□□□ -0.67
HDAC1-208ENST00000482310 FAM120AOSQ5T036 256 aa10.85□□□□□ -0.67
HDAC1-208ENST00000482310 C6orf183Q5T699 404 aa10.85□□□□□ -0.67
HDAC1-208ENST00000482310 HACD4Q5VWC8 232 aa10.85□□□□□ -0.67
HDAC1-208ENST00000482310 FAM53AQ6NSI3 398 aaPredicted RBP10.85□□□□□ -0.67
HDAC1-208ENST00000482310 C1orf229Q6ZS94 237 aaPredicted RBP10.85□□□□□ -0.67
HDAC1-208ENST00000482310 PNKDQ8N490 385 aa10.85□□□□□ -0.67
HDAC1-208ENST00000482310 KIR3DL3Q8N743 410 aa10.85□□□□□ -0.67
HDAC1-208ENST00000482310 ZNF565Q8N9K5 539 aa10.85□□□□□ -0.67
HDAC1-208ENST00000482310 OR1L1Q8NH94 360 aa10.85□□□□□ -0.67
HDAC1-208ENST00000482310 LEAP2Q969E1 77 aa10.85□□□□□ -0.67
HDAC1-208ENST00000482310 TBX15Q96SF7 602 aa10.85□□□□□ -0.67
HDAC1-208ENST00000482310 ST6GALNAC5Q9BVH7 336 aa10.85□□□□□ -0.67
HDAC1-208ENST00000482310 AUNIPQ9H7T9 357 aa10.85□□□□□ -0.67
HDAC1-208ENST00000482310 TAF9BQ9HBM6 251 aa10.85□□□□□ -0.67
HDAC1-208ENST00000482310 KCNIP1Q9NZI2 227 aa10.85□□□□□ -0.67
HDAC1-208ENST00000482310 OPN4Q9UHM6 478 aa10.85□□□□□ -0.67
HDAC1-208ENST00000482310 KPTNQ9Y664 436 aa10.85□□□□□ -0.67
HDAC1-208ENST00000482310 ANK3Q12955 4377 aaKnown RBP10.84□□□□□ -0.67
HDAC1-208ENST00000482310 A0A0A6YYH2 397 aa10.84□□□□□ -0.67
HDAC1-208ENST00000482310 KBTBD11-OT1A0A1B0GTJ5 212 aa10.84□□□□□ -0.67
HDAC1-208ENST00000482310 MEIOCA2RUB1 952 aa10.84□□□□□ -0.67
HDAC1-208ENST00000482310 A6NJ64 397 aa10.84□□□□□ -0.67
HDAC1-208ENST00000482310 J3QLI3 93 aa10.84□□□□□ -0.67
HDAC1-208ENST00000482310 M0R1W7 72 aa10.84□□□□□ -0.67
HDAC1-208ENST00000482310 SSX5O60225 188 aa10.84□□□□□ -0.67
HDAC1-208ENST00000482310 CA11O75493 328 aa10.84□□□□□ -0.67
HDAC1-208ENST00000482310 NAPSAO96009 420 aa10.84□□□□□ -0.67
HDAC1-208ENST00000482310 HBZP02008 142 aa10.84□□□□□ -0.67
HDAC1-208ENST00000482310 IGHV1-8P0DP01 117 aa10.84□□□□□ -0.67
HDAC1-208ENST00000482310 IGHV4-38-2P0DP08 117 aa10.84□□□□□ -0.67
HDAC1-208ENST00000482310 MMP9P14780 707 aa10.84□□□□□ -0.67
HDAC1-208ENST00000482310 TNFSF8P32971 234 aa10.84□□□□□ -0.67
HDAC1-208ENST00000482310 S100A5P33763 92 aa10.84□□□□□ -0.67
HDAC1-208ENST00000482310 SRP14P37108 136 aaKnown RBP10.84□□□□□ -0.67
HDAC1-208ENST00000482310 GNG10P50151 68 aa10.84□□□□□ -0.67
HDAC1-208ENST00000482310 PAX5Q02548 391 aa10.84□□□□□ -0.67
HDAC1-208ENST00000482310 IL18Q14116 193 aa10.84□□□□□ -0.67
HDAC1-208ENST00000482310 C11orf91Q3C1V1 193 aa10.84□□□□□ -0.67
HDAC1-208ENST00000482310 RUSC1-AS1Q66K80 236 aa10.84□□□□□ -0.67
HDAC1-208ENST00000482310 GVQW1Q8N7I0 195 aa10.84□□□□□ -0.67
HDAC1-208ENST00000482310 OR10V1Q8NGI7 309 aa10.84□□□□□ -0.67
HDAC1-208ENST00000482310 IL1F10Q8WWZ1 152 aa10.84□□□□□ -0.67
HDAC1-208ENST00000482310 CORO2AQ92828 525 aa10.84□□□□□ -0.67
HDAC1-208ENST00000482310 CMTM3Q96MX0 182 aa10.84□□□□□ -0.67
HDAC1-208ENST00000482310 MMP27Q9H306 513 aa10.84□□□□□ -0.67
HDAC1-208ENST00000482310 TAS2R3Q9NYW6 316 aa10.84□□□□□ -0.67
HDAC1-208ENST00000482310 IDI2-AS1Q9NZ38 188 aa10.84□□□□□ -0.67
HDAC1-208ENST00000482310 hCG_1809904A0A1W2PP81 198 aa10.83□□□□□ -0.68
HDAC1-208ENST00000482310 A0A1W2PPE2 198 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms