RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 SYT8Q8NBV8 401 aa8.72□□□□□ -1.01
USP11-208ENST00000480104 OTOSQ8NHW6 89 aa8.72□□□□□ -1.01
USP11-208ENST00000480104 MRGPRDQ8TDS7 321 aa8.72□□□□□ -1.01
USP11-208ENST00000480104 CCDC140Q96MF4 163 aa8.72□□□□□ -1.01
USP11-208ENST00000480104 RDH12Q96NR8 316 aa8.72□□□□□ -1.01
USP11-208ENST00000480104 ZNF251Q9BRH9 671 aa8.72□□□□□ -1.01
USP11-208ENST00000480104 HMG20AQ9NP66 347 aa8.72□□□□□ -1.01
USP11-208ENST00000480104 PEF1Q9UBV8 284 aaKnown RBP8.72□□□□□ -1.01
USP11-208ENST00000480104 GAB2Q9UQC2 676 aa8.72□□□□□ -1.01
USP11-208ENST00000480104 KIR2DL5BA0A0G2JN68 375 aa8.71□□□□□ -1.02
USP11-208ENST00000480104 KIR2DL5BA0A0G2JPC4 375 aa8.71□□□□□ -1.02
USP11-208ENST00000480104 ACOD1A6NK06 481 aa8.71□□□□□ -1.02
USP11-208ENST00000480104 FXYD1O00168 92 aa8.71□□□□□ -1.02
USP11-208ENST00000480104 SLC33A1O00400 549 aaPredicted RBP8.71□□□□□ -1.02
USP11-208ENST00000480104 HSPB6O14558 160 aa8.71□□□□□ -1.02
USP11-208ENST00000480104 C21orf33P30042 268 aaPredicted RBP8.71□□□□□ -1.02
USP11-208ENST00000480104 IDH3AP50213 366 aa8.71□□□□□ -1.02
USP11-208ENST00000480104 TM4SF20Q53R12 229 aa8.71□□□□□ -1.02
USP11-208ENST00000480104 SERTAD4-AS1Q5TG53 156 aa8.71□□□□□ -1.02
USP11-208ENST00000480104 TMEM61Q8N0U2 210 aa8.71□□□□□ -1.02
USP11-208ENST00000480104 KIR2DL5AQ8N109 375 aa8.71□□□□□ -1.02
USP11-208ENST00000480104 DNAAF1Q8NEP3 725 aa8.71□□□□□ -1.02
USP11-208ENST00000480104 LFNGQ8NES3 379 aa8.71□□□□□ -1.02
USP11-208ENST00000480104 OR10A7Q8NGE5 316 aa8.71□□□□□ -1.02
USP11-208ENST00000480104 OR8J3Q8NGG0 315 aa8.71□□□□□ -1.02
USP11-208ENST00000480104 KIR2DL5BQ8NHK3 375 aa8.71□□□□□ -1.02
USP11-208ENST00000480104 MED20Q9H944 212 aa8.71□□□□□ -1.02
USP11-208ENST00000480104 SSU72Q9NP77 194 aaKnown RBP8.71□□□□□ -1.02
USP11-208ENST00000480104 RNF150Q9ULK6 438 aa8.71□□□□□ -1.02
USP11-208ENST00000480104 V9GYS6 101 aa8.71□□□□□ -1.02
USP11-208ENST00000480104 AGRNO00468 2067 aa8.7□□□□□ -1.02
USP11-208ENST00000480104 TRAV39A0A0B4J263 110 aa8.7□□□□□ -1.02
USP11-208ENST00000480104 A0A0G2JLM5 398 aa8.7□□□□□ -1.02
USP11-208ENST00000480104 FAM220BPB1ANY3 271 aa8.7□□□□□ -1.02
USP11-208ENST00000480104 SLC31A2O15432 143 aa8.7□□□□□ -1.02
USP11-208ENST00000480104 SELENOFO60613 162 aa8.7□□□□□ -1.02
USP11-208ENST00000480104 DIRAS1O95057 198 aa8.7□□□□□ -1.02
USP11-208ENST00000480104 TTRP02766 147 aa8.7□□□□□ -1.02
USP11-208ENST00000480104 GSSP48637 474 aa8.7□□□□□ -1.02
USP11-208ENST00000480104 UBE2V2Q15819 145 aa8.7□□□□□ -1.02
USP11-208ENST00000480104 AKIRIN2Q53H80 203 aa8.7□□□□□ -1.02
USP11-208ENST00000480104 Q6P435 159 aa8.7□□□□□ -1.02
USP11-208ENST00000480104 SPATA12Q7Z6I5 190 aa8.7□□□□□ -1.02
USP11-208ENST00000480104 TMEM179BQ7Z7N9 219 aa8.7□□□□□ -1.02
USP11-208ENST00000480104 ANKRD42Q8N9B4 389 aa8.7□□□□□ -1.02
USP11-208ENST00000480104 POC5Q8NA72 575 aa8.7□□□□□ -1.02
USP11-208ENST00000480104 OR8D4Q8NGM9 314 aa8.7□□□□□ -1.02
USP11-208ENST00000480104 ZNF503Q96F45 646 aa8.7□□□□□ -1.02
USP11-208ENST00000480104 RNF126Q9BV68 326 aa8.7□□□□□ -1.02
USP11-208ENST00000480104 COMMD4Q9H0A8 199 aa8.7□□□□□ -1.02
USP11-208ENST00000480104 TECRQ9NZ01 308 aaKnown RBP8.7□□□□□ -1.02
USP11-208ENST00000480104 NDUFAF4Q9P032 175 aa8.7□□□□□ -1.02
USP11-208ENST00000480104 NUFIP1Q9UHK0 495 aaKnown RBP8.7□□□□□ -1.02
USP11-208ENST00000480104 DHDHQ9UQ10 334 aa8.7□□□□□ -1.02
USP11-208ENST00000480104 CDH10Q9Y6N8 788 aa8.7□□□□□ -1.02
USP11-208ENST00000480104 LOC110117498-PIK3R3F6TDL0 507 aa8.69□□□□□ -1.02
USP11-208ENST00000480104 NDUFA3O95167 84 aa8.69□□□□□ -1.02
USP11-208ENST00000480104 AMBPP02760 352 aa8.69□□□□□ -1.02
USP11-208ENST00000480104 CSTBP04080 98 aaKnown RBP8.69□□□□□ -1.02
USP11-208ENST00000480104 FOLR2P14207 255 aa8.69□□□□□ -1.02
USP11-208ENST00000480104 ZNF137PP52743 207 aa8.69□□□□□ -1.02
USP11-208ENST00000480104 CYLC2Q14093 348 aaPredicted RBP8.69□□□□□ -1.02
USP11-208ENST00000480104 SLC25A48Q6ZT89 311 aaKnown RBP8.69□□□□□ -1.02
USP11-208ENST00000480104 NR2C2APQ86WQ0 139 aa8.69□□□□□ -1.02
USP11-208ENST00000480104 CHST4Q8NCG5 386 aa8.69□□□□□ -1.02
USP11-208ENST00000480104 BVESQ8NE79 360 aa8.69□□□□□ -1.02
USP11-208ENST00000480104 OR2T12Q8NG77 320 aa8.69□□□□□ -1.02
USP11-208ENST00000480104 OR51T1Q8NGJ9 327 aa8.69□□□□□ -1.02
USP11-208ENST00000480104 OR14K1Q8NGZ2 314 aa8.69□□□□□ -1.02
USP11-208ENST00000480104 SH3GL1Q99961 368 aa8.69□□□□□ -1.02
USP11-208ENST00000480104 RARRES2Q99969 163 aa8.69□□□□□ -1.02
USP11-208ENST00000480104 ROPN1BQ9BZX4 212 aaPredicted RBP8.69□□□□□ -1.02
USP11-208ENST00000480104 PARP12Q9H0J9 701 aaKnown RBP8.69□□□□□ -1.02
USP11-208ENST00000480104 FBXL15Q9H469 300 aa8.69□□□□□ -1.02
USP11-208ENST00000480104 ROPN1Q9HAT0 212 aaPredicted RBP8.69□□□□□ -1.02
USP11-208ENST00000480104 PLA2G2DQ9UNK4 145 aa8.69□□□□□ -1.02
USP11-208ENST00000480104 FAM32AQ9Y421 112 aaKnown RBP8.69□□□□□ -1.02
USP11-208ENST00000480104 A0A0B4J203 849 aa8.68□□□□□ -1.02
USP11-208ENST00000480104 C2orf70A6NJV1 201 aa8.68□□□□□ -1.02
USP11-208ENST00000480104 FCN1O00602 326 aa8.68□□□□□ -1.02
USP11-208ENST00000480104 SCAF4O95104 1147 aaKnown RBP8.68□□□□□ -1.02
USP11-208ENST00000480104 RPL35AP18077 110 aaKnown RBP8.68□□□□□ -1.02
USP11-208ENST00000480104 NUDT2P50583 147 aa8.68□□□□□ -1.02
USP11-208ENST00000480104 FUT6P51993 359 aa8.68□□□□□ -1.02
USP11-208ENST00000480104 ZNF343Q6P1L6 599 aa8.68□□□□□ -1.02
USP11-208ENST00000480104 Q6ZTC4 211 aa8.68□□□□□ -1.02
USP11-208ENST00000480104 C8orf31Q8N9H6 132 aa8.68□□□□□ -1.02
USP11-208ENST00000480104 NPBQ8NG41 125 aa8.68□□□□□ -1.02
USP11-208ENST00000480104 RP9Q8TA86 221 aaKnown RBP8.68□□□□□ -1.02
USP11-208ENST00000480104 FRZBQ92765 325 aa8.68□□□□□ -1.02
USP11-208ENST00000480104 CCDC28BQ9BUN5 200 aa8.68□□□□□ -1.02
USP11-208ENST00000480104 SPAG4Q9NPE6 437 aa8.68□□□□□ -1.02
USP11-208ENST00000480104 GMPR2Q9P2T1 348 aaKnown RBP8.68□□□□□ -1.02
USP11-208ENST00000480104 IGHV3-43A0A0B4J1X8 118 aa8.67□□□□□ -1.02
USP11-208ENST00000480104 TRAV10A0A0B4J240 114 aa8.67□□□□□ -1.02
USP11-208ENST00000480104 A0A1B0GTI1 187 aa8.67□□□□□ -1.02
USP11-208ENST00000480104 SDCBPO00560 298 aaPredicted RBP8.67□□□□□ -1.02
USP11-208ENST00000480104 CYB5AP00167 134 aa8.67□□□□□ -1.02
USP11-208ENST00000480104 IFNA10P01566 189 aa8.67□□□□□ -1.02
USP11-208ENST00000480104 IGHV3-43DP0DP04 118 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms