RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 SLCO1B3Q9NPD5 702 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 TRAPPC4Q9Y296 219 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 HDGFL3Q9Y3E1 203 aa3.76□□□□□ -1.81
UPF3A-205ENST00000479712 A0A0J9YW62 118 aa3.75□□□□□ -1.81
UPF3A-205ENST00000479712 OR5B21A6NL26 309 aa3.75□□□□□ -1.81
UPF3A-205ENST00000479712 BBIP1A8MTZ0 92 aa3.75□□□□□ -1.81
UPF3A-205ENST00000479712 EVPLLA8MZ36 301 aa3.75□□□□□ -1.81
UPF3A-205ENST00000479712 NDUFS8O00217 210 aa3.75□□□□□ -1.81
UPF3A-205ENST00000479712 GPR171O14626 319 aa3.75□□□□□ -1.81
UPF3A-205ENST00000479712 EIF1BO60739 113 aaKnown RBP3.75□□□□□ -1.81
UPF3A-205ENST00000479712 UPK3AO75631 287 aa3.75□□□□□ -1.81
UPF3A-205ENST00000479712 SNAPINO95295 136 aa3.75□□□□□ -1.81
UPF3A-205ENST00000479712 LY6G6CO95867 125 aa3.75□□□□□ -1.81
UPF3A-205ENST00000479712 NPPAP01160 153 aa3.75□□□□□ -1.81
UPF3A-205ENST00000479712 UBTFL6P0CB48 400 aaPredicted RBP3.75□□□□□ -1.81
UPF3A-205ENST00000479712 TROVE2P10155 538 aaKnown RBP eCLIP3.75□□□□□ -1.81
UPF3A-205ENST00000479712 CTBP2P56545 445 aa3.75□□□□□ -1.81
UPF3A-205ENST00000479712 SELENOTP62341 195 aa3.75□□□□□ -1.81
UPF3A-205ENST00000479712 MAPK14Q16539 360 aa3.75□□□□□ -1.81
UPF3A-205ENST00000479712 HSP90B2PQ58FF3 399 aa3.75□□□□□ -1.81
UPF3A-205ENST00000479712 C1orf146Q5VVC0 180 aa3.75□□□□□ -1.81
UPF3A-205ENST00000479712 DHRS4L2Q6PKH6 230 aa3.75□□□□□ -1.81
UPF3A-205ENST00000479712 C5orf46Q6UWT4 87 aa3.75□□□□□ -1.81
UPF3A-205ENST00000479712 C6orf89Q6UWU4 347 aa3.75□□□□□ -1.81
UPF3A-205ENST00000479712 Q6ZN92 141 aa3.75□□□□□ -1.81
UPF3A-205ENST00000479712 TMPPEQ6ZT21 453 aa3.75□□□□□ -1.81
UPF3A-205ENST00000479712 GALNT10Q86SR1 603 aa3.75□□□□□ -1.81
UPF3A-205ENST00000479712 SLC30A8Q8IWU4 369 aa3.75□□□□□ -1.81
UPF3A-205ENST00000479712 CEND1Q8N111 149 aa3.75□□□□□ -1.81
UPF3A-205ENST00000479712 CNEP1R1Q8N9A8 125 aa3.75□□□□□ -1.81
UPF3A-205ENST00000479712 CCDC71LQ8N9Z2 235 aa3.75□□□□□ -1.81
UPF3A-205ENST00000479712 GATSQ8NAP1 163 aa3.75□□□□□ -1.81
UPF3A-205ENST00000479712 OR9I1Q8NGQ6 314 aa3.75□□□□□ -1.81
UPF3A-205ENST00000479712 OR52P1PQ8NH57 321 aa3.75□□□□□ -1.81
UPF3A-205ENST00000479712 RAB8BQ92930 207 aa3.75□□□□□ -1.81
UPF3A-205ENST00000479712 MARC2Q969Z3 335 aa3.75□□□□□ -1.81
UPF3A-205ENST00000479712 ZHX1-C8orf76Q96EF9 292 aa3.75□□□□□ -1.81
UPF3A-205ENST00000479712 HIST1H4GQ99525 98 aa3.75□□□□□ -1.81
UPF3A-205ENST00000479712 POTEKPQ9BYX7 375 aa3.75□□□□□ -1.81
UPF3A-205ENST00000479712 ACTR6Q9GZN1 396 aa3.75□□□□□ -1.81
UPF3A-205ENST00000479712 TMEM38AQ9H6F2 299 aa3.75□□□□□ -1.81
UPF3A-205ENST00000479712 NARFLQ9H6Q4 476 aa3.75□□□□□ -1.81
UPF3A-205ENST00000479712 CACYBPQ9HB71 228 aaKnown RBP3.75□□□□□ -1.81
UPF3A-205ENST00000479712 KIF25Q9UIL4 384 aa3.75□□□□□ -1.81
UPF3A-205ENST00000479712 DNAH11Q96DT5 4516 aa3.75□□□□□ -1.81
UPF3A-205ENST00000479712 PKHD1P08F94 4074 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 PRORSD1PA6NEY8 169 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 CCDC182A6NF36 153 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 A6NIZ1 184 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 B4DSR2 109 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 C9JVG2 144 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 H0YC42 278 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 ABCD4O14678 606 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 NPIPB7O75200 414 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 WBP4O75554 376 aaKnown RBP3.74□□□□□ -1.81
UPF3A-205ENST00000479712 SERPINB7O75635 380 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 AQP8O94778 261 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 VAMP5O95183 116 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 BCHEP06276 602 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 ZBTB25P24278 435 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 AGTR1P30556 359 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 CRATP43155 626 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 CRYBB2P43320 205 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 POLR2HP52434 150 aaKnown RBP3.74□□□□□ -1.81
UPF3A-205ENST00000479712 RAP1BP61224 184 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 COPZ1P61923 177 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 SLC35A1P78382 337 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 H3F3AP84243 136 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 MERTKQ12866 999 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 GNMTQ14749 295 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 MAPRE2Q15555 327 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 TOMM34Q15785 309 aaPredicted RBP3.74□□□□□ -1.81
UPF3A-205ENST00000479712 DGUOKQ16854 277 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 TMEM176BQ3YBM2 270 aaPredicted RBP3.74□□□□□ -1.81
UPF3A-205ENST00000479712 NCMAPQ5T1S8 102 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 MRPL2Q5T653 305 aaKnown RBP3.74□□□□□ -1.81
UPF3A-205ENST00000479712 GPR157Q5UAW9 335 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 REEP3Q6NUK4 255 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 RNASEKQ6P5S7 137 aaKnown RBP3.74□□□□□ -1.81
UPF3A-205ENST00000479712 MSRB3Q8IXL7 192 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 TPRX1Q8N7U7 411 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 OR5M1Q8NGP8 315 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 ZNF563Q8TA94 476 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 PIGXQ8TBF5 258 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 DDIT4LQ96D03 193 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 C16orf74Q96GX8 76 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 CGREF1Q99674 301 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 ARHGDIGQ99819 225 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 SH3GL1Q99961 368 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 POLR2J2Q9GZM3 115 aaKnown RBP3.74□□□□□ -1.81
UPF3A-205ENST00000479712 POLR2J3Q9H1A7 115 aaKnown RBP3.74□□□□□ -1.81
UPF3A-205ENST00000479712 CBLN4Q9NTU7 201 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 FAIMQ9NVQ4 179 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 SLC25A37Q9NYZ2 338 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 CCDC167Q9P0B6 97 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 EMC3Q9P0I2 261 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 VAPAQ9P0L0 249 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 ZNF443Q9Y2A4 671 aaPredicted RBP3.74□□□□□ -1.81
UPF3A-205ENST00000479712 AP3M1Q9Y2T2 418 aa3.74□□□□□ -1.81
UPF3A-205ENST00000479712 NDUFAF1Q9Y375 327 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms