RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 ZNF573Q86YE8 665 aa3.56□□□□□ -1.84
CKS1B-207ENST00000477676 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.56□□□□□ -1.84
CKS1B-207ENST00000477676 HS3ST5Q8IZT8 346 aa3.56□□□□□ -1.84
CKS1B-207ENST00000477676 ABHD12Q8N2K0 398 aa3.56□□□□□ -1.84
CKS1B-207ENST00000477676 ZNF676Q8N7Q3 588 aa3.56□□□□□ -1.84
CKS1B-207ENST00000477676 KLHL30-AS1Q8NEE0 82 aa3.56□□□□□ -1.84
CKS1B-207ENST00000477676 OR4X2Q8NGF9 303 aa3.56□□□□□ -1.84
CKS1B-207ENST00000477676 FAM81AQ8TBF8 368 aa3.56□□□□□ -1.84
CKS1B-207ENST00000477676 TRMT10AQ8TBZ6 339 aaKnown RBP3.56□□□□□ -1.84
CKS1B-207ENST00000477676 GLMPQ8WWB7 406 aa3.56□□□□□ -1.84
CKS1B-207ENST00000477676 NPIPB3Q92617 1050 aa3.56□□□□□ -1.84
CKS1B-207ENST00000477676 SLAMF9Q96A28 289 aa3.56□□□□□ -1.84
CKS1B-207ENST00000477676 MCUR1Q96AQ8 359 aa3.56□□□□□ -1.84
CKS1B-207ENST00000477676 COQ2Q96H96 371 aa3.56□□□□□ -1.84
CKS1B-207ENST00000477676 CDRT15Q96T59 188 aa3.56□□□□□ -1.84
CKS1B-207ENST00000477676 FEVQ99581 238 aa3.56□□□□□ -1.84
CKS1B-207ENST00000477676 APOL4Q9BPW4 351 aa3.56□□□□□ -1.84
CKS1B-207ENST00000477676 CLEC7AQ9BXN2 247 aa3.56□□□□□ -1.84
CKS1B-207ENST00000477676 PKIBQ9C010 78 aa3.56□□□□□ -1.84
CKS1B-207ENST00000477676 RBFOX1Q9NWB1 397 aaKnown RBP3.56□□□□□ -1.84
CKS1B-207ENST00000477676 DPM3Q9P2X0 92 aa3.56□□□□□ -1.84
CKS1B-207ENST00000477676 MRM2Q9UI43 246 aaKnown RBP3.56□□□□□ -1.84
CKS1B-207ENST00000477676 ENPP5Q9UJA9 477 aa3.56□□□□□ -1.84
CKS1B-207ENST00000477676 SIRT4Q9Y6E7 314 aaPredicted RBP3.56□□□□□ -1.84
CKS1B-207ENST00000477676 PCLOQ9Y6V0 5065 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 IGKV1-9A0A0C4DH69 117 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 IGKV1-12A0A0C4DH73 117 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 FAM230AA0A1W2PPH8 454 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 A0A1W2PPI3 338 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 hADV38S2A0JD32 116 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 DPPA5A6NC42 116 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 ARRDC5A6NEK1 342 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 BUB1B-PAK6H3BSN5 160 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 M0R129 80 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 CCL24O00175 119 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 DLGAP1O14490 977 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 NDUFAB1O14561 156 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 CASQ2O14958 399 aaPredicted RBP3.55□□□□□ -1.84
CKS1B-207ENST00000477676 CCDC22O60826 627 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 ENTPD6O75354 484 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 HAND1O96004 215 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 IGKV1D-12P01611 117 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 IGHV3-7P01780 117 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 IGHG2P01859 326 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 BCL3P20749 454 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 CCL1P22362 96 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 CHATP28329 748 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 PRDX6P30041 224 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 GLIPR1P48060 266 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 P2RX3P56373 397 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 MS4A2Q01362 244 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 KIAA0141Q14154 515 aaPredicted RBP3.55□□□□□ -1.84
CKS1B-207ENST00000477676 ZNF146Q15072 292 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 GRK1Q15835 563 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 SNAPC1Q16533 368 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 C17orf58Q2M2W7 97 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 HLA-DRB5Q30154 266 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 TPTE2P1Q5T6R2 138 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 ZFAND6Q6FIF0 208 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 OR2T5Q6IEZ7 315 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 ACSM6Q6P461 480 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 DEGS2Q6QHC5 323 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 HEPN1Q6WQI6 88 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 ADAMTSL5Q6ZMM2 481 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 SLC25A26Q70HW3 274 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 COMMD2Q86X83 199 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 ZNF695Q8IW36 515 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 ZNF679Q8IYX0 411 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 ELMOD2Q8IZ81 293 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 PGAM4Q8N0Y7 254 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 C5orf56Q8N8D9 126 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 OR10G2Q8NGC3 310 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 OR2T29Q8NH02 315 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 OR56B4Q8NH76 319 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 CORO2AQ92828 525 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 LEAP2Q969E1 77 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 ZNF479Q96JC4 524 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 CEP19Q96LK0 163 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 RCHY1Q96PM5 261 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 MCRIP2Q9BUT9 160 aaKnown RBP3.55□□□□□ -1.84
CKS1B-207ENST00000477676 TM2D2Q9BX73 214 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 GPR61Q9BZJ8 451 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 YIPF3Q9GZM5 350 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 PPIL3Q9H2H8 161 aaKnown RBP3.55□□□□□ -1.84
CKS1B-207ENST00000477676 DCLRE1BQ9H816 532 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 SEBOXQ9HB31 216 aaPredicted RBP3.55□□□□□ -1.84
CKS1B-207ENST00000477676 ZNF446Q9NWS9 450 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 RABL2AQ9UBK7 228 aaPredicted RBP3.55□□□□□ -1.84
CKS1B-207ENST00000477676 LAMP5Q9UJQ1 280 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 OR52A1Q9UKL2 312 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 POLDIP2Q9Y2S7 368 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 MOB4Q9Y3A3 225 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 SAMHD1Q9Y3Z3 626 aaKnown RBP3.55□□□□□ -1.84
CKS1B-207ENST00000477676 HSPE1-MOB4S4R3N1 261 aa3.55□□□□□ -1.84
CKS1B-207ENST00000477676 MUC4Q99102 2169 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 TMEM272A0A1B0GTI8 110 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 LEUTXA8MZ59 168 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 SEC14L6B5MCN3 397 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 TEX22C9J3V5 150 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 PTGES3LE9PB15 166 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms