RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 ZBTB34Q8NCN2 500 aa12.64□□□□□ -0.39
HDAC6-220ENST00000477528 OR1K1Q8NGR3 316 aa12.64□□□□□ -0.39
HDAC6-220ENST00000477528 FOXJ2Q9P0K8 574 aa12.64□□□□□ -0.39
HDAC6-220ENST00000477528 RP1P56715 2156 aa12.64□□□□□ -0.39
HDAC6-220ENST00000477528 IGHV3-43A0A0B4J1X8 118 aa12.63□□□□□ -0.39
HDAC6-220ENST00000477528 IGHV3-43DP0DP04 118 aa12.63□□□□□ -0.39
HDAC6-220ENST00000477528 HKR1P10072 659 aa12.63□□□□□ -0.39
HDAC6-220ENST00000477528 KLK2P20151 261 aa12.63□□□□□ -0.39
HDAC6-220ENST00000477528 CTSSP25774 331 aa12.63□□□□□ -0.39
HDAC6-220ENST00000477528 ZNF154Q13106 437 aa12.63□□□□□ -0.39
HDAC6-220ENST00000477528 ATP6V1FQ16864 119 aa12.63□□□□□ -0.39
HDAC6-220ENST00000477528 FAM214BQ7L5A3 538 aa12.63□□□□□ -0.39
HDAC6-220ENST00000477528 SLC35E1Q96K37 410 aa12.63□□□□□ -0.39
HDAC6-220ENST00000477528 ZNF703Q9H7S9 590 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-220ENST00000477528 FREM3P0C091 2139 aa12.63□□□□□ -0.39
HDAC6-220ENST00000477528 TRAV39A0A0B4J263 110 aa12.63□□□□□ -0.39
HDAC6-220ENST00000477528 A0A0G2JMM0 328 aa12.63□□□□□ -0.39
HDAC6-220ENST00000477528 hCG_38984A0A1B0GV85 526 aa12.63□□□□□ -0.39
HDAC6-220ENST00000477528 A0A1W2PPB8 328 aa12.63□□□□□ -0.39
HDAC6-220ENST00000477528 A0A1W2PRS3 328 aa12.63□□□□□ -0.39
HDAC6-220ENST00000477528 KIR3DP1A8MWS1 328 aa12.63□□□□□ -0.39
HDAC6-220ENST00000477528 SCTP09683 121 aa12.63□□□□□ -0.39
HDAC6-220ENST00000477528 SLC25A6P12236 298 aa12.63□□□□□ -0.39
HDAC6-220ENST00000477528 SULT1A1P50225 295 aa12.63□□□□□ -0.39
HDAC6-220ENST00000477528 POC1AQ8NBT0 407 aa12.63□□□□□ -0.39
HDAC6-220ENST00000477528 OR10X1Q8NGY0 326 aa12.63□□□□□ -0.39
HDAC6-220ENST00000477528 CABLES2Q9BTV7 478 aa12.63□□□□□ -0.39
HDAC6-220ENST00000477528 PKIBQ9C010 78 aa12.63□□□□□ -0.39
HDAC6-220ENST00000477528 IL17BQ9UHF5 180 aa12.63□□□□□ -0.39
HDAC6-220ENST00000477528 SDK2Q58EX2 2172 aa12.63□□□□□ -0.39
HDAC6-220ENST00000477528 GPR37O15354 613 aa12.63□□□□□ -0.39
HDAC6-220ENST00000477528 KLF7O75840 302 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-220ENST00000477528 S100A8P05109 93 aa12.63□□□□□ -0.39
HDAC6-220ENST00000477528 RAB7AP51149 207 aa12.63□□□□□ -0.39
HDAC6-220ENST00000477528 NRN1LQ496H8 165 aa12.63□□□□□ -0.39
HDAC6-220ENST00000477528 NCR3LG1Q68D85 454 aa12.63□□□□□ -0.39
HDAC6-220ENST00000477528 MRPS18CQ9Y3D5 142 aaKnown RBP12.63□□□□□ -0.39
HDAC6-220ENST00000477528 NAT2P11245 290 aa12.63□□□□□ -0.39
HDAC6-220ENST00000477528 F2RP25116 425 aa12.63□□□□□ -0.39
HDAC6-220ENST00000477528 PAQR4Q8N4S7 273 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-220ENST00000477528 OR5D13Q8NGL4 314 aa12.63□□□□□ -0.39
HDAC6-220ENST00000477528 ZNF837Q96EG3 531 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-220ENST00000477528 COMMD5Q9GZQ3 224 aa12.63□□□□□ -0.39
HDAC6-220ENST00000477528 MEX3AA1L020 520 aaKnown RBP12.62□□□□□ -0.39
HDAC6-220ENST00000477528 MAP1LC3B2A6NCE7 125 aa12.62□□□□□ -0.39
HDAC6-220ENST00000477528 SYNGR1O43759 233 aa12.62□□□□□ -0.39
HDAC6-220ENST00000477528 UCP3P55916 312 aa12.62□□□□□ -0.39
HDAC6-220ENST00000477528 C15orf54Q8N8G6 183 aa12.62□□□□□ -0.39
HDAC6-220ENST00000477528 MRGPRFQ96AM1 343 aa12.62□□□□□ -0.39
HDAC6-220ENST00000477528 MAP1LC3BQ9GZQ8 125 aa12.62□□□□□ -0.39
HDAC6-220ENST00000477528 DOCK9Q9BZ29 2069 aa12.62□□□□□ -0.39
HDAC6-220ENST00000477528 LNP1A1A4G5 178 aa12.62□□□□□ -0.39
HDAC6-220ENST00000477528 NTN3O00634 580 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-220ENST00000477528 FGF2P09038 288 aa12.62□□□□□ -0.39
HDAC6-220ENST00000477528 PSG2P11465 335 aa12.62□□□□□ -0.39
HDAC6-220ENST00000477528 HOXD11P31277 338 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-220ENST00000477528 OR6C3Q9NZP0 311 aa12.62□□□□□ -0.39
HDAC6-220ENST00000477528 H0Y980 276 aa12.62□□□□□ -0.39
HDAC6-220ENST00000477528 ZNHIT1O43257 154 aa12.62□□□□□ -0.39
HDAC6-220ENST00000477528 GALR2O43603 387 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-220ENST00000477528 ZNF735P0CB33 412 aa12.62□□□□□ -0.39
HDAC6-220ENST00000477528 NHLH2Q02577 135 aa12.62□□□□□ -0.39
HDAC6-220ENST00000477528 GFRALQ6UXV0 394 aa12.62□□□□□ -0.39
HDAC6-220ENST00000477528 CBLN2Q8IUK8 224 aa12.62□□□□□ -0.39
HDAC6-220ENST00000477528 FAM117AQ9C073 453 aa12.62□□□□□ -0.39
HDAC6-220ENST00000477528 PITX3O75364 302 aa12.62□□□□□ -0.39
HDAC6-220ENST00000477528 BMP5P22003 454 aa12.62□□□□□ -0.39
HDAC6-220ENST00000477528 RSPO4Q2I0M5 234 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-220ENST00000477528 FAM166AQ6J272 317 aa12.62□□□□□ -0.39
HDAC6-220ENST00000477528 DENND4CQ5VZ89 1909 aa12.61□□□□□ -0.39
HDAC6-220ENST00000477528 CDRT15L2A8MXV6 281 aa12.61□□□□□ -0.39
HDAC6-220ENST00000477528 F6UZH7 168 aa12.61□□□□□ -0.39
HDAC6-220ENST00000477528 MPZP25189 248 aa12.61□□□□□ -0.39
HDAC6-220ENST00000477528 UCP2P55851 309 aa12.61□□□□□ -0.39
HDAC6-220ENST00000477528 TMEM147Q9BVK8 224 aa12.61□□□□□ -0.39
HDAC6-220ENST00000477528 ZNF319Q9P2F9 582 aa12.61□□□□□ -0.39
HDAC6-220ENST00000477528 DOCK8Q8NF50 2099 aa12.61□□□□□ -0.39
HDAC6-220ENST00000477528 IGKV1-9A0A0C4DH69 117 aa12.61□□□□□ -0.39
HDAC6-220ENST00000477528 MMP9P14780 707 aa12.61□□□□□ -0.39
HDAC6-220ENST00000477528 NPBWR2P48146 333 aa12.61□□□□□ -0.39
HDAC6-220ENST00000477528 TMEM41BQ5BJD5 291 aa12.61□□□□□ -0.39
HDAC6-220ENST00000477528 FFAR4Q5NUL3 377 aa12.61□□□□□ -0.39
HDAC6-220ENST00000477528 UBAC2Q8NBM4 344 aa12.61□□□□□ -0.39
HDAC6-220ENST00000477528 ABHD14BQ96IU4 210 aa12.61□□□□□ -0.39
HDAC6-220ENST00000477528 SIGLEC12Q96PQ1 595 aa12.61□□□□□ -0.39
HDAC6-220ENST00000477528 NRIP2Q9BQI9 281 aa12.61□□□□□ -0.39
HDAC6-220ENST00000477528 LTBP2Q14767 1821 aa12.61□□□□□ -0.39
HDAC6-220ENST00000477528 TSTD3H0UI37 97 aa12.61□□□□□ -0.39
HDAC6-220ENST00000477528 GZMHP20718 246 aa12.61□□□□□ -0.39
HDAC6-220ENST00000477528 ATP6V0CP27449 155 aa12.61□□□□□ -0.39
HDAC6-220ENST00000477528 PTGDSP41222 190 aa12.61□□□□□ -0.39
HDAC6-220ENST00000477528 TNFAIP6P98066 277 aaPredicted RBP12.61□□□□□ -0.39
HDAC6-220ENST00000477528 ZNF528Q3MIS6 628 aa12.61□□□□□ -0.39
HDAC6-220ENST00000477528 AWAT1Q58HT5 328 aa12.61□□□□□ -0.39
HDAC6-220ENST00000477528 S100A7AQ86SG5 101 aa12.61□□□□□ -0.39
HDAC6-220ENST00000477528 Q9N2K0 584 aa12.61□□□□□ -0.39
HDAC6-220ENST00000477528 TRAV14DV4A0A0A6YYC5 116 aa12.6□□□□□ -0.39
HDAC6-220ENST00000477528 HRASP01112 189 aa12.6□□□□□ -0.39
HDAC6-220ENST00000477528 KIR2DS2P43631 304 aa12.6□□□□□ -0.39
HDAC6-220ENST00000477528 ERHP84090 104 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms