RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 L7N2F9 121 aa14.12□□□□□ -0.15
EPHB4-204ENST00000477446 NDUFS8O00217 210 aa14.12□□□□□ -0.15
EPHB4-204ENST00000477446 PPIHO43447 177 aaKnown RBP14.12□□□□□ -0.15
EPHB4-204ENST00000477446 SYNGR1O43759 233 aa14.12□□□□□ -0.15
EPHB4-204ENST00000477446 PLATP00750 562 aa14.12□□□□□ -0.15
EPHB4-204ENST00000477446 LHBP01229 141 aa14.12□□□□□ -0.15
EPHB4-204ENST00000477446 CHATP28329 748 aa14.12□□□□□ -0.15
EPHB4-204ENST00000477446 SEC61A1P61619 476 aaKnown RBP14.12□□□□□ -0.15
EPHB4-204ENST00000477446 FAM201AQ5SY85 155 aa14.12□□□□□ -0.15
EPHB4-204ENST00000477446 ELP2Q6IA86 826 aa14.12□□□□□ -0.15
EPHB4-204ENST00000477446 PEG10Q86TG7 708 aaKnown RBP14.12□□□□□ -0.15
EPHB4-204ENST00000477446 GCSAMQ8N6F7 178 aa14.12□□□□□ -0.15
EPHB4-204ENST00000477446 LRRC29Q8WV35 223 aa14.12□□□□□ -0.15
EPHB4-204ENST00000477446 PKIBQ9C010 78 aa14.12□□□□□ -0.15
EPHB4-204ENST00000477446 HEXA-AS1Q9H8Q6 139 aa14.12□□□□□ -0.15
EPHB4-204ENST00000477446 RFPL4AA6NLU0 287 aa14.11□□□□□ -0.15
EPHB4-204ENST00000477446 C3orf80F5H4A9 247 aa14.11□□□□□ -0.15
EPHB4-204ENST00000477446 RFPL4AL1F8VTS6 287 aa14.11□□□□□ -0.15
EPHB4-204ENST00000477446 TSC22D2O75157 780 aa14.11□□□□□ -0.15
EPHB4-204ENST00000477446 ZNF205O95201 554 aa14.11□□□□□ -0.15
EPHB4-204ENST00000477446 GPR6P46095 362 aaPredicted RBP14.11□□□□□ -0.15
EPHB4-204ENST00000477446 IL24Q13007 206 aa14.11□□□□□ -0.15
EPHB4-204ENST00000477446 PPP1R1AQ13522 171 aa14.11□□□□□ -0.15
EPHB4-204ENST00000477446 TAF9Q16594 264 aa14.11□□□□□ -0.15
EPHB4-204ENST00000477446 C2orf68Q2NKX9 166 aa14.11□□□□□ -0.15
EPHB4-204ENST00000477446 C6orf201Q7Z4U5 140 aa14.11□□□□□ -0.15
EPHB4-204ENST00000477446 MKXQ8IYA7 352 aa14.11□□□□□ -0.15
EPHB4-204ENST00000477446 C1orf87Q8N0U7 546 aa14.11□□□□□ -0.15
EPHB4-204ENST00000477446 WFDC11Q8NEX6 87 aa14.11□□□□□ -0.15
EPHB4-204ENST00000477446 OR10Z1Q8NGY1 313 aa14.11□□□□□ -0.15
EPHB4-204ENST00000477446 MARCH1Q8TCQ1 289 aa14.11□□□□□ -0.15
EPHB4-204ENST00000477446 Q96MF0 132 aa14.11□□□□□ -0.15
EPHB4-204ENST00000477446 CMSS1Q9BQ75 279 aaKnown RBP14.11□□□□□ -0.15
EPHB4-204ENST00000477446 PIMREGQ9BSJ6 248 aa14.11□□□□□ -0.15
EPHB4-204ENST00000477446 BPESC1Q9GZL8 116 aa14.11□□□□□ -0.15
EPHB4-204ENST00000477446 IGKV1-12A0A0C4DH73 117 aa14.1□□□□□ -0.15
EPHB4-204ENST00000477446 VWC2LB2RUY7 222 aa14.1□□□□□ -0.15
EPHB4-204ENST00000477446 SIX6O95475 246 aa14.1□□□□□ -0.15
EPHB4-204ENST00000477446 IGKV1D-12P01611 117 aa14.1□□□□□ -0.15
EPHB4-204ENST00000477446 EGR1P18146 543 aa14.1□□□□□ -0.15
EPHB4-204ENST00000477446 OPCMLQ14982 345 aa14.1□□□□□ -0.15
EPHB4-204ENST00000477446 NHLRC3Q5JS37 347 aa14.1□□□□□ -0.15
EPHB4-204ENST00000477446 NKAPLQ5M9Q1 402 aa14.1□□□□□ -0.15
EPHB4-204ENST00000477446 AVPI1Q5T686 147 aa14.1□□□□□ -0.15
EPHB4-204ENST00000477446 SIGIRRQ6IA17 410 aa14.1□□□□□ -0.15
EPHB4-204ENST00000477446 TMEM65Q6PI78 240 aa14.1□□□□□ -0.15
EPHB4-204ENST00000477446 SLC25A26Q70HW3 274 aa14.1□□□□□ -0.15
EPHB4-204ENST00000477446 RTN4RL2Q86UN3 420 aa14.1□□□□□ -0.15
EPHB4-204ENST00000477446 BOLLQ8N9W6 283 aaKnown RBP14.1□□□□□ -0.15
EPHB4-204ENST00000477446 ZNF680Q8NEM1 530 aa14.1□□□□□ -0.15
EPHB4-204ENST00000477446 RAB1CQ92928 201 aa14.1□□□□□ -0.15
EPHB4-204ENST00000477446 EHFQ9NZC4 300 aa14.1□□□□□ -0.15
EPHB4-204ENST00000477446 COMMD9Q9P000 198 aa14.1□□□□□ -0.15
EPHB4-204ENST00000477446 ST3GAL6Q9Y274 331 aa14.1□□□□□ -0.15
EPHB4-204ENST00000477446 POLDIP2Q9Y2S7 368 aa14.1□□□□□ -0.15
EPHB4-204ENST00000477446 WIPI2Q9Y4P8 454 aa14.1□□□□□ -0.15
EPHB4-204ENST00000477446 AKAP9Q99996 3911 aa14.1□□□□□ -0.15
EPHB4-204ENST00000477446 MYO9AB2RTY4 2548 aa14.1□□□□□ -0.15
EPHB4-204ENST00000477446 SRRM5B3KS81 715 aa14.09□□□□□ -0.15
EPHB4-204ENST00000477446 PDCD6O75340 191 aa14.09□□□□□ -0.15
EPHB4-204ENST00000477446 FUT3P21217 361 aa14.09□□□□□ -0.15
EPHB4-204ENST00000477446 HTR2BP41595 481 aa14.09□□□□□ -0.15
EPHB4-204ENST00000477446 RBM11P57052 281 aaKnown RBP14.09□□□□□ -0.15
EPHB4-204ENST00000477446 ARPC4P59998 168 aa14.09□□□□□ -0.15
EPHB4-204ENST00000477446 CYCSP99999 105 aaKnown RBP14.09□□□□□ -0.15
EPHB4-204ENST00000477446 LY6G6FQ5SQ64 297 aa14.09□□□□□ -0.15
EPHB4-204ENST00000477446 SLAMF9Q96A28 289 aa14.09□□□□□ -0.15
EPHB4-204ENST00000477446 TIMD4Q96H15 378 aa14.09□□□□□ -0.15
EPHB4-204ENST00000477446 ZNF488Q96MN9 340 aa14.09□□□□□ -0.15
EPHB4-204ENST00000477446 WDR13Q9H1Z4 485 aa14.09□□□□□ -0.15
EPHB4-204ENST00000477446 RHOFQ9HBH0 211 aa14.09□□□□□ -0.15
EPHB4-204ENST00000477446 MTCH1Q9NZJ7 389 aa14.09□□□□□ -0.15
EPHB4-204ENST00000477446 ANXA10Q9UJ72 324 aa14.09□□□□□ -0.15
EPHB4-204ENST00000477446 PPIAL4EA0A075B759 164 aa14.09□□□□□ -0.15
EPHB4-204ENST00000477446 PPIAL4DF5H284 164 aa14.09□□□□□ -0.15
EPHB4-204ENST00000477446 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.09□□□□□ -0.15
EPHB4-204ENST00000477446 WNT9BO14905 357 aa14.09□□□□□ -0.15
EPHB4-204ENST00000477446 SFT2D2O95562 160 aa14.09□□□□□ -0.15
EPHB4-204ENST00000477446 IGHV2-70P01814 119 aa14.09□□□□□ -0.15
EPHB4-204ENST00000477446 PGA5P0DJD9 388 aa14.09□□□□□ -0.15
EPHB4-204ENST00000477446 PPIAL4FP0DN26 164 aa14.09□□□□□ -0.15
EPHB4-204ENST00000477446 SLC25A4P12235 298 aa14.09□□□□□ -0.15
EPHB4-204ENST00000477446 AKR1C4P17516 323 aa14.09□□□□□ -0.15
EPHB4-204ENST00000477446 CD80P33681 288 aa14.09□□□□□ -0.15
EPHB4-204ENST00000477446 SRSF7Q16629 238 aaKnown RBP eCLIP14.09□□□□□ -0.15
EPHB4-204ENST00000477446 DCAF12L2Q5VW00 463 aa14.09□□□□□ -0.15
EPHB4-204ENST00000477446 C17orf107Q6ZR85 190 aa14.09□□□□□ -0.15
EPHB4-204ENST00000477446 BATF2Q8N1L9 274 aa14.09□□□□□ -0.15
EPHB4-204ENST00000477446 POC1AQ8NBT0 407 aa14.09□□□□□ -0.15
EPHB4-204ENST00000477446 FAAP24Q9BTP7 215 aa14.09□□□□□ -0.15
EPHB4-204ENST00000477446 AK3Q9UIJ7 227 aa14.09□□□□□ -0.15
EPHB4-204ENST00000477446 PPIAL4AQ9Y536 164 aa14.09□□□□□ -0.15
EPHB4-204ENST00000477446 TEX15Q9BXT5 2789 aa14.09□□□□□ -0.15
EPHB4-204ENST00000477446 GEMIN2O14893 280 aaKnown RBP14.08□□□□□ -0.16
EPHB4-204ENST00000477446 NOS1APO75052 506 aaPredicted RBP14.08□□□□□ -0.16
EPHB4-204ENST00000477446 ACAA1P09110 424 aaPredicted RBP14.08□□□□□ -0.16
EPHB4-204ENST00000477446 RPA2P15927 270 aa14.08□□□□□ -0.16
EPHB4-204ENST00000477446 SLC25A16P16260 332 aa14.08□□□□□ -0.16
EPHB4-204ENST00000477446 S100A11P31949 105 aa14.08□□□□□ -0.16
EPHB4-204ENST00000477446 AADACL3Q5VUY0 350 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms