RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 OSR2Q8N2R0 312 aa5.87□□□□□ -1.47
UBR4-212ENST00000475973 RBMXL3Q8N7X1 1067 aaKnown RBP5.87□□□□□ -1.47
UBR4-212ENST00000475973 OR52M1Q8NGK5 317 aa5.87□□□□□ -1.47
UBR4-212ENST00000475973 OR1F12Q8NHA8 337 aa5.87□□□□□ -1.47
UBR4-212ENST00000475973 TMEM171Q8WVE6 324 aa5.87□□□□□ -1.47
UBR4-212ENST00000475973 MBD3L1Q8WWY6 194 aa5.87□□□□□ -1.47
UBR4-212ENST00000475973 WFDC12Q8WWY7 111 aa5.87□□□□□ -1.47
UBR4-212ENST00000475973 MAFIPQ8WZ33 124 aa5.87□□□□□ -1.47
UBR4-212ENST00000475973 PIGTQ969N2 578 aa5.87□□□□□ -1.47
UBR4-212ENST00000475973 TMEM45BQ96B21 275 aa5.87□□□□□ -1.47
UBR4-212ENST00000475973 RCC1LQ96I51 464 aaKnown RBP5.87□□□□□ -1.47
UBR4-212ENST00000475973 CRB3Q9BUF7 120 aa5.87□□□□□ -1.47
UBR4-212ENST00000475973 PARD6GQ9BYG4 376 aaPredicted RBP5.87□□□□□ -1.47
UBR4-212ENST00000475973 PRDM14Q9GZV8 571 aa5.87□□□□□ -1.47
UBR4-212ENST00000475973 TMPRSS5Q9H3S3 457 aa5.87□□□□□ -1.47
UBR4-212ENST00000475973 METTL7AQ9H8H3 244 aa5.87□□□□□ -1.47
UBR4-212ENST00000475973 SIRT7Q9NRC8 400 aa5.87□□□□□ -1.47
UBR4-212ENST00000475973 LYRM2Q9NU23 88 aaPredicted RBP5.87□□□□□ -1.47
UBR4-212ENST00000475973 TMEM38BQ9NVV0 291 aa5.87□□□□□ -1.47
UBR4-212ENST00000475973 GSKIPQ9P0R6 139 aa5.87□□□□□ -1.47
UBR4-212ENST00000475973 ZNF581Q9P0T4 197 aa5.87□□□□□ -1.47
UBR4-212ENST00000475973 TINAGQ9UJW2 476 aa5.87□□□□□ -1.47
UBR4-212ENST00000475973 PIEZO2Q9H5I5 2752 aa5.87□□□□□ -1.47
UBR4-212ENST00000475973 UBR5O95071 2799 aaPredicted RBP5.86□□□□□ -1.47
UBR4-212ENST00000475973 IGKV3D-15A0A087WSY6 115 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 IGSF23A1L1A6 192 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 ZNF724A8MTY0 619 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 MPPED1O15442 326 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 CBR3O75828 277 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 TMEM50AO95807 157 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 FBP1P09467 338 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 TMEM225BP0DP42 221 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 COX5BP10606 129 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 COX6A1P12074 109 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 FUT3P21217 361 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 S100PP25815 95 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 ATP6V0CP27449 155 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 PPP1CCP36873 323 aaKnown RBP5.86□□□□□ -1.47
UBR4-212ENST00000475973 MTCP1P56278 107 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 CLDN15P56746 228 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 RBM11P57052 281 aaKnown RBP5.86□□□□□ -1.47
UBR4-212ENST00000475973 MLF1P58340 268 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 S100A10P60903 97 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 CCL20P78556 96 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 NHLH2Q02577 135 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 ZNF92Q03936 586 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 SRSF1Q07955 248 aaKnown RBP eCLIP5.86□□□□□ -1.47
UBR4-212ENST00000475973 ZNF266Q14584 549 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 RSU1Q15404 277 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 TAF9Q16594 264 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 PRR30Q53SZ7 412 aaPredicted RBP5.86□□□□□ -1.47
UBR4-212ENST00000475973 IGFL3Q6UXB1 125 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 RBMS3Q6XE24 437 aaKnown RBP5.86□□□□□ -1.47
UBR4-212ENST00000475973 SHISA6Q6ZSJ9 500 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 SLC35E3Q7Z769 313 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 SELENOHQ8IZQ5 122 aaKnown RBP5.86□□□□□ -1.47
UBR4-212ENST00000475973 OR2C3Q8N628 320 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 TMEM252Q8N6L7 170 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 CCDC71LQ8N9Z2 235 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 Q8NA96 180 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 OR5D18Q8NGL1 313 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 OR13D1Q8NGV5 346 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 C2CD4CQ8TF44 421 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 ZNF845Q96IR2 970 aaPredicted RBP5.86□□□□□ -1.47
UBR4-212ENST00000475973 TP53RKQ96S44 253 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 PYGO2Q9BRQ0 406 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 PBDC1Q9BVG4 233 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 DEFB126Q9BYW3 111 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 FGF23Q9GZV9 251 aaPredicted RBP5.86□□□□□ -1.47
UBR4-212ENST00000475973 WNT5BQ9H1J7 359 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 ZNF552Q9H707 407 aaPredicted RBP5.86□□□□□ -1.47
UBR4-212ENST00000475973 PLEKHF2Q9H8W4 249 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 ZNF286AQ9HBT8 521 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 SPACA1Q9HBV2 294 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 Q9N2K0 584 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 GPR173Q9NS66 373 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 POLR1DQ9Y2S0 133 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 MMP24Q9Y5R2 645 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 HS3ST3B1Q9Y662 390 aa5.86□□□□□ -1.47
UBR4-212ENST00000475973 SHANK1Q9Y566 2161 aa5.85□□□□□ -1.47
UBR4-212ENST00000475973 C3orf85A0A1B0GTC6 90 aa5.85□□□□□ -1.47
UBR4-212ENST00000475973 A0A1W2PPH5 198 aa5.85□□□□□ -1.47
UBR4-212ENST00000475973 A6NLC8 198 aa5.85□□□□□ -1.47
UBR4-212ENST00000475973 ZNF729A6NN14 1252 aaPredicted RBP5.85□□□□□ -1.47
UBR4-212ENST00000475973 F5H5K5 113 aa5.85□□□□□ -1.47
UBR4-212ENST00000475973 GEMIN2O14893 280 aaKnown RBP5.85□□□□□ -1.47
UBR4-212ENST00000475973 XRCC2O43543 280 aa5.85□□□□□ -1.47
UBR4-212ENST00000475973 SGCEO43556 437 aa5.85□□□□□ -1.47
UBR4-212ENST00000475973 GATCO43716 136 aaKnown RBP5.85□□□□□ -1.47
UBR4-212ENST00000475973 CLN5O75503 358 aa5.85□□□□□ -1.47
UBR4-212ENST00000475973 DIRAS3O95661 229 aa5.85□□□□□ -1.47
UBR4-212ENST00000475973 PPYP01298 95 aa5.85□□□□□ -1.47
UBR4-212ENST00000475973 FABP1P07148 127 aa5.85□□□□□ -1.47
UBR4-212ENST00000475973 VDAC1P21796 283 aa5.85□□□□□ -1.47
UBR4-212ENST00000475973 AADACP22760 399 aa5.85□□□□□ -1.47
UBR4-212ENST00000475973 COL8A1P27658 744 aa5.85□□□□□ -1.47
UBR4-212ENST00000475973 SRD5A2P31213 254 aa5.85□□□□□ -1.47
UBR4-212ENST00000475973 SFTPDP35247 375 aa5.85□□□□□ -1.47
UBR4-212ENST00000475973 CDX1P47902 265 aaPredicted RBP5.85□□□□□ -1.47
UBR4-212ENST00000475973 FHITP49789 147 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms