RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 ACP7Q6ZNF0 438 aa12.92□□□□□ -0.34
CPSF3-203ENST00000475482 ZNF826PQ6ZT77 177 aa12.92□□□□□ -0.34
CPSF3-203ENST00000475482 NLRC3Q7RTR2 1065 aa12.92□□□□□ -0.34
CPSF3-203ENST00000475482 BATF2Q8N1L9 274 aa12.92□□□□□ -0.34
CPSF3-203ENST00000475482 GCSAMQ8N6F7 178 aa12.92□□□□□ -0.34
CPSF3-203ENST00000475482 NUDCD2Q8WVJ2 157 aa12.92□□□□□ -0.34
CPSF3-203ENST00000475482 UPRTQ96BW1 309 aa12.92□□□□□ -0.34
CPSF3-203ENST00000475482 CMSS1Q9BQ75 279 aaKnown RBP12.92□□□□□ -0.34
CPSF3-203ENST00000475482 FAAP24Q9BTP7 215 aa12.92□□□□□ -0.34
CPSF3-203ENST00000475482 C11orf54Q9H0W9 315 aaPredicted RBP12.92□□□□□ -0.34
CPSF3-203ENST00000475482 SEBOXQ9HB31 216 aaPredicted RBP12.92□□□□□ -0.34
CPSF3-203ENST00000475482 RCC2Q9P258 522 aaKnown RBP12.92□□□□□ -0.34
CPSF3-203ENST00000475482 DNAJB11Q9UBS4 358 aa12.92□□□□□ -0.34
CPSF3-203ENST00000475482 KCNK7Q9Y2U2 307 aa12.92□□□□□ -0.34
CPSF3-203ENST00000475482 POM121CA8CG34 1229 aa12.91□□□□□ -0.34
CPSF3-203ENST00000475482 ZNF736B4DX44 427 aaPredicted RBP12.91□□□□□ -0.34
CPSF3-203ENST00000475482 NDUFA2O43678 99 aa12.91□□□□□ -0.34
CPSF3-203ENST00000475482 NPY4RP50391 375 aa12.91□□□□□ -0.34
CPSF3-203ENST00000475482 TEX36Q5VZQ5 186 aa12.91□□□□□ -0.34
CPSF3-203ENST00000475482 OLFML2AQ68BL7 652 aa12.91□□□□□ -0.34
CPSF3-203ENST00000475482 PLET1Q6UQ28 207 aa12.91□□□□□ -0.34
CPSF3-203ENST00000475482 BTNL3Q6UXE8 466 aa12.91□□□□□ -0.34
CPSF3-203ENST00000475482 C9orf139Q6ZV77 190 aa12.91□□□□□ -0.34
CPSF3-203ENST00000475482 BPIFB2Q8N4F0 458 aa12.91□□□□□ -0.34
CPSF3-203ENST00000475482 NEK7Q8TDX7 302 aa12.91□□□□□ -0.34
CPSF3-203ENST00000475482 DPAGT1Q9H3H5 408 aa12.91□□□□□ -0.34
CPSF3-203ENST00000475482 C12orf4Q9NQ89 552 aa12.91□□□□□ -0.34
CPSF3-203ENST00000475482 CTSZQ9UBR2 303 aa12.91□□□□□ -0.34
CPSF3-203ENST00000475482 CLN8Q9UBY8 286 aa12.91□□□□□ -0.34
CPSF3-203ENST00000475482 ZNF69Q9UC07 566 aa12.91□□□□□ -0.34
CPSF3-203ENST00000475482 TRAV38-1A0A0B4J264 116 aa12.9□□□□□ -0.34
CPSF3-203ENST00000475482 TMEM89A2RUT3 159 aa12.9□□□□□ -0.34
CPSF3-203ENST00000475482 MEIS3P1A6NDR6 274 aa12.9□□□□□ -0.34
CPSF3-203ENST00000475482 OOEPA6NGQ2 149 aa12.9□□□□□ -0.34
CPSF3-203ENST00000475482 C22orf46C9J442 243 aa12.9□□□□□ -0.34
CPSF3-203ENST00000475482 TRIM77I1YAP6 450 aa12.9□□□□□ -0.34
CPSF3-203ENST00000475482 SSX5O60225 188 aa12.9□□□□□ -0.34
CPSF3-203ENST00000475482 FCN3O75636 299 aa12.9□□□□□ -0.34
CPSF3-203ENST00000475482 RAB3DO95716 219 aa12.9□□□□□ -0.34
CPSF3-203ENST00000475482 TAS2R46P59540 309 aa12.9□□□□□ -0.34
CPSF3-203ENST00000475482 KCNJ8Q15842 424 aa12.9□□□□□ -0.34
CPSF3-203ENST00000475482 C11orf91Q3C1V1 193 aa12.9□□□□□ -0.34
CPSF3-203ENST00000475482 SFRP4Q6FHJ7 346 aaPredicted RBP12.9□□□□□ -0.34
CPSF3-203ENST00000475482 STEAP1BQ6NZ63 245 aa12.9□□□□□ -0.34
CPSF3-203ENST00000475482 GDPD3Q7L5L3 318 aa12.9□□□□□ -0.34
CPSF3-203ENST00000475482 NRARPQ7Z6K4 114 aa12.9□□□□□ -0.34
CPSF3-203ENST00000475482 HOGA1Q86XE5 327 aa12.9□□□□□ -0.34
CPSF3-203ENST00000475482 C22orf15Q8WYQ4 148 aa12.9□□□□□ -0.34
CPSF3-203ENST00000475482 SULT4A1Q9BR01 284 aa12.9□□□□□ -0.34
CPSF3-203ENST00000475482 DPCDQ9BVM2 203 aaPredicted RBP12.9□□□□□ -0.34
CPSF3-203ENST00000475482 HRASLSQ9HDD0 168 aa12.9□□□□□ -0.34
CPSF3-203ENST00000475482 KAAG1Q9UBP8 84 aa12.9□□□□□ -0.34
CPSF3-203ENST00000475482 AK3Q9UIJ7 227 aa12.9□□□□□ -0.34
CPSF3-203ENST00000475482 ANAPC10Q9UM13 185 aa12.9□□□□□ -0.34
CPSF3-203ENST00000475482 UBE2QL1A1L167 161 aa12.89□□□□□ -0.35
CPSF3-203ENST00000475482 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.89□□□□□ -0.35
CPSF3-203ENST00000475482 HAND1O96004 215 aa12.89□□□□□ -0.35
CPSF3-203ENST00000475482 EGR1P18146 543 aa12.89□□□□□ -0.35
CPSF3-203ENST00000475482 NAT1P18440 290 aa12.89□□□□□ -0.35
CPSF3-203ENST00000475482 DUSP1P28562 367 aa12.89□□□□□ -0.35
CPSF3-203ENST00000475482 SLC6A1P30531 599 aa12.89□□□□□ -0.35
CPSF3-203ENST00000475482 KCNJ3P48549 501 aa12.89□□□□□ -0.35
CPSF3-203ENST00000475482 GMFBP60983 142 aa12.89□□□□□ -0.35
CPSF3-203ENST00000475482 PAN3Q58A45 887 aaKnown RBP12.89□□□□□ -0.35
CPSF3-203ENST00000475482 RNASE10Q5GAN6 216 aaKnown RBP12.89□□□□□ -0.35
CPSF3-203ENST00000475482 CCBE1Q6UXH8 406 aaPredicted RBP12.89□□□□□ -0.35
CPSF3-203ENST00000475482 Q6ZNX1 250 aa12.89□□□□□ -0.35
CPSF3-203ENST00000475482 BCL6BQ8N143 479 aaPredicted RBP12.89□□□□□ -0.35
CPSF3-203ENST00000475482 SUMF2Q8NBJ7 301 aa12.89□□□□□ -0.35
CPSF3-203ENST00000475482 DUSP18Q8NEJ0 188 aa12.89□□□□□ -0.35
CPSF3-203ENST00000475482 PPP1R35Q8TAP8 253 aa12.89□□□□□ -0.35
CPSF3-203ENST00000475482 ZNF48Q96MX3 618 aaPredicted RBP12.89□□□□□ -0.35
CPSF3-203ENST00000475482 CHMP1AQ9HD42 196 aaPredicted RBP12.89□□□□□ -0.35
CPSF3-203ENST00000475482 MCUBQ9NWR8 336 aa12.89□□□□□ -0.35
CPSF3-203ENST00000475482 NLKQ9UBE8 527 aa12.89□□□□□ -0.35
CPSF3-203ENST00000475482 OR14J1Q9UGF5 321 aa12.89□□□□□ -0.35
CPSF3-203ENST00000475482 ELF5Q9UKW6 265 aaPredicted RBP12.89□□□□□ -0.35
CPSF3-203ENST00000475482 MGAT4AQ9UM21 535 aa12.89□□□□□ -0.35
CPSF3-203ENST00000475482 DISC1C4P0D8 188 aa12.88□□□□□ -0.35
CPSF3-203ENST00000475482 C3orf80F5H4A9 247 aa12.88□□□□□ -0.35
CPSF3-203ENST00000475482 OR2H2O95918 312 aa12.88□□□□□ -0.35
CPSF3-203ENST00000475482 CD74P04233 296 aa12.88□□□□□ -0.35
CPSF3-203ENST00000475482 CD3DP04234 171 aa12.88□□□□□ -0.35
CPSF3-203ENST00000475482 IFNA6P05013 189 aa12.88□□□□□ -0.35
CPSF3-203ENST00000475482 IGHV4-38-2P0DP08 117 aa12.88□□□□□ -0.35
CPSF3-203ENST00000475482 MUC1P15941 1255 aaPredicted RBP12.88□□□□□ -0.35
CPSF3-203ENST00000475482 AMY2BP19961 511 aa12.88□□□□□ -0.35
CPSF3-203ENST00000475482 LMO1P25800 156 aa12.88□□□□□ -0.35
CPSF3-203ENST00000475482 OR3A3P47888 321 aa12.88□□□□□ -0.35
CPSF3-203ENST00000475482 RFX2P48378 723 aa12.88□□□□□ -0.35
CPSF3-203ENST00000475482 UBA52P62987 128 aaKnown RBP12.88□□□□□ -0.35
CPSF3-203ENST00000475482 PDCD1Q15116 288 aa12.88□□□□□ -0.35
CPSF3-203ENST00000475482 SRSF7Q16629 238 aaKnown RBP eCLIP12.88□□□□□ -0.35
CPSF3-203ENST00000475482 MICBQ29980 383 aa12.88□□□□□ -0.35
CPSF3-203ENST00000475482 Q6P435 159 aa12.88□□□□□ -0.35
CPSF3-203ENST00000475482 ZNF782Q6ZMW2 699 aaPredicted RBP12.88□□□□□ -0.35
CPSF3-203ENST00000475482 BEST4Q8NFU0 473 aa12.88□□□□□ -0.35
CPSF3-203ENST00000475482 OR4K15Q8NH41 348 aa12.88□□□□□ -0.35
CPSF3-203ENST00000475482 ST6GALNAC5Q9BVH7 336 aa12.88□□□□□ -0.35
CPSF3-203ENST00000475482 PRDM13Q9H4Q3 707 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms