RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 H2AFB2P0C5Z0 115 aa8.6□□□□□ -1.03
COL12A1-206ENST00000474564 ZBTB25P24278 435 aa8.6□□□□□ -1.03
COL12A1-206ENST00000474564 RFX2P48378 723 aa8.6□□□□□ -1.03
COL12A1-206ENST00000474564 BCAP31P51572 246 aa8.6□□□□□ -1.03
COL12A1-206ENST00000474564 CCR6P51684 374 aa8.6□□□□□ -1.03
COL12A1-206ENST00000474564 RAB25P57735 213 aa8.6□□□□□ -1.03
COL12A1-206ENST00000474564 RBMS2Q15434 407 aaKnown RBP8.6□□□□□ -1.03
COL12A1-206ENST00000474564 WDR25Q64LD2 544 aaPredicted RBP8.6□□□□□ -1.03
COL12A1-206ENST00000474564 OR52W1Q6IF63 320 aa8.6□□□□□ -1.03
COL12A1-206ENST00000474564 FAAP20Q6NZ36 180 aa8.6□□□□□ -1.03
COL12A1-206ENST00000474564 BTNL3Q6UXE8 466 aa8.6□□□□□ -1.03
COL12A1-206ENST00000474564 Q6ZS49 121 aa8.6□□□□□ -1.03
COL12A1-206ENST00000474564 OR5AP2Q8NGF4 316 aa8.6□□□□□ -1.03
COL12A1-206ENST00000474564 OR6F1Q8NGZ6 308 aa8.6□□□□□ -1.03
COL12A1-206ENST00000474564 OR10J5Q8NHC4 309 aa8.6□□□□□ -1.03
COL12A1-206ENST00000474564 PLPPR1Q8TBJ4 325 aa8.6□□□□□ -1.03
COL12A1-206ENST00000474564 MRPL30Q8TCC3 161 aaKnown RBP8.6□□□□□ -1.03
COL12A1-206ENST00000474564 ARL11Q969Q4 196 aa8.6□□□□□ -1.03
COL12A1-206ENST00000474564 CREB3L1Q96BA8 519 aa8.6□□□□□ -1.03
COL12A1-206ENST00000474564 PRRT1Q99946 306 aa8.6□□□□□ -1.03
COL12A1-206ENST00000474564 TAF9BQ9HBM6 251 aa8.6□□□□□ -1.03
COL12A1-206ENST00000474564 ZNF230Q9UIE0 474 aaPredicted RBP8.6□□□□□ -1.03
COL12A1-206ENST00000474564 ANXA10Q9UJ72 324 aa8.6□□□□□ -1.03
COL12A1-206ENST00000474564 ELF5Q9UKW6 265 aaPredicted RBP8.6□□□□□ -1.03
COL12A1-206ENST00000474564 RBMX2Q9Y388 322 aaKnown RBP8.6□□□□□ -1.03
COL12A1-206ENST00000474564 PLCE1Q9P212 2302 aa8.6□□□□□ -1.03
COL12A1-206ENST00000474564 ICE1Q9Y2F5 2266 aa8.6□□□□□ -1.03
COL12A1-206ENST00000474564 ARFGEF3Q5TH69 2177 aa8.59□□□□□ -1.03
COL12A1-206ENST00000474564 PPIAL4CA0A0B4J2A2 164 aa8.59□□□□□ -1.03
COL12A1-206ENST00000474564 ARPC1BO15143 372 aaKnown RBP8.59□□□□□ -1.03
COL12A1-206ENST00000474564 ENSAO43768 121 aaKnown RBP8.59□□□□□ -1.03
COL12A1-206ENST00000474564 SSX5O60225 188 aa8.59□□□□□ -1.03
COL12A1-206ENST00000474564 IGHV2-5P01817 119 aa8.59□□□□□ -1.03
COL12A1-206ENST00000474564 PMP2P02689 132 aa8.59□□□□□ -1.03
COL12A1-206ENST00000474564 PPIAL4GP0DN37 164 aa8.59□□□□□ -1.03
COL12A1-206ENST00000474564 NAT1P18440 290 aa8.59□□□□□ -1.03
COL12A1-206ENST00000474564 S100GP29377 79 aa8.59□□□□□ -1.03
COL12A1-206ENST00000474564 HLA-DRB3P79483 266 aa8.59□□□□□ -1.03
COL12A1-206ENST00000474564 HOXA4Q00056 320 aaPredicted RBP8.59□□□□□ -1.03
COL12A1-206ENST00000474564 CDK10Q15131 360 aa8.59□□□□□ -1.03
COL12A1-206ENST00000474564 DNM1P46Q6ZS02 220 aa8.59□□□□□ -1.03
COL12A1-206ENST00000474564 BTN2A1Q7KYR7 527 aa8.59□□□□□ -1.03
COL12A1-206ENST00000474564 GLCCI1Q86VQ1 547 aa8.59□□□□□ -1.03
COL12A1-206ENST00000474564 GAPTQ8N292 157 aa8.59□□□□□ -1.03
COL12A1-206ENST00000474564 PRR18Q8N4B5 295 aa8.59□□□□□ -1.03
COL12A1-206ENST00000474564 ARRDC1Q8N5I2 433 aa8.59□□□□□ -1.03
COL12A1-206ENST00000474564 GVQW1Q8N7I0 195 aa8.59□□□□□ -1.03
COL12A1-206ENST00000474564 OR10A7Q8NGE5 316 aa8.59□□□□□ -1.03
COL12A1-206ENST00000474564 CLDND2Q8NHS1 167 aa8.59□□□□□ -1.03
COL12A1-206ENST00000474564 MRGPRDQ8TDS7 321 aa8.59□□□□□ -1.03
COL12A1-206ENST00000474564 IL1F10Q8WWZ1 152 aa8.59□□□□□ -1.03
COL12A1-206ENST00000474564 DYRK2Q92630 601 aa8.59□□□□□ -1.03
COL12A1-206ENST00000474564 CORO2AQ92828 525 aa8.59□□□□□ -1.03
COL12A1-206ENST00000474564 ZNF714Q96N38 554 aa8.59□□□□□ -1.03
COL12A1-206ENST00000474564 FOXC2Q99958 501 aa8.59□□□□□ -1.03
COL12A1-206ENST00000474564 HDHD3Q9BSH5 251 aaPredicted RBP8.59□□□□□ -1.03
COL12A1-206ENST00000474564 DCTN5Q9BTE1 182 aa8.59□□□□□ -1.03
COL12A1-206ENST00000474564 C20orf85Q9H1P6 137 aa8.59□□□□□ -1.03
COL12A1-206ENST00000474564 GPN1Q9HCN4 374 aaPredicted RBP8.59□□□□□ -1.03
COL12A1-206ENST00000474564 MBNL3Q9NUK0 354 aaKnown RBP8.59□□□□□ -1.03
COL12A1-206ENST00000474564 EHFQ9NZC4 300 aa8.59□□□□□ -1.03
COL12A1-206ENST00000474564 ZNF581Q9P0T4 197 aa8.59□□□□□ -1.03
COL12A1-206ENST00000474564 SLC23A1Q9UHI7 598 aa8.59□□□□□ -1.03
COL12A1-206ENST00000474564 RBM7Q9Y580 266 aaKnown RBP8.59□□□□□ -1.03
COL12A1-206ENST00000474564 PKDREJQ9NTG1 2253 aa8.59□□□□□ -1.03
COL12A1-206ENST00000474564 ABCA4P78363 2273 aa8.58□□□□□ -1.04
COL12A1-206ENST00000474564 KBTBD11-OT1A0A1B0GTJ5 212 aa8.58□□□□□ -1.04
COL12A1-206ENST00000474564 FAM172BPA6NC97 362 aa8.58□□□□□ -1.04
COL12A1-206ENST00000474564 VWC2LB2RUY7 222 aa8.58□□□□□ -1.04
COL12A1-206ENST00000474564 F5H0A9 414 aaPredicted RBP8.58□□□□□ -1.04
COL12A1-206ENST00000474564 BET1O15155 118 aa8.58□□□□□ -1.04
COL12A1-206ENST00000474564 TFF1P04155 84 aa8.58□□□□□ -1.04
COL12A1-206ENST00000474564 ZNF728P0DKX0 622 aa8.58□□□□□ -1.04
COL12A1-206ENST00000474564 SLC6A1P30531 599 aa8.58□□□□□ -1.04
COL12A1-206ENST00000474564 HRH1P35367 487 aa8.58□□□□□ -1.04
COL12A1-206ENST00000474564 ECI1P42126 302 aa8.58□□□□□ -1.04
COL12A1-206ENST00000474564 HERV-K104P61576 105 aa8.58□□□□□ -1.04
COL12A1-206ENST00000474564 CBX3Q13185 183 aa8.58□□□□□ -1.04
COL12A1-206ENST00000474564 CR1LQ2VPA4 569 aa8.58□□□□□ -1.04
COL12A1-206ENST00000474564 LPCAT3Q6P1A2 487 aa8.58□□□□□ -1.04
COL12A1-206ENST00000474564 ZNF880Q6PDB4 577 aa8.58□□□□□ -1.04
COL12A1-206ENST00000474564 C11orf88Q6PI97 169 aa8.58□□□□□ -1.04
COL12A1-206ENST00000474564 TPRX1Q8N7U7 411 aa8.58□□□□□ -1.04
COL12A1-206ENST00000474564 DUSP18Q8NEJ0 188 aa8.58□□□□□ -1.04
COL12A1-206ENST00000474564 OR51S1Q8NGJ8 323 aa8.58□□□□□ -1.04
COL12A1-206ENST00000474564 OR56B4Q8NH76 319 aa8.58□□□□□ -1.04
COL12A1-206ENST00000474564 MAFIPQ8WZ33 124 aa8.58□□□□□ -1.04
COL12A1-206ENST00000474564 COQ2Q96H96 371 aa8.58□□□□□ -1.04
COL12A1-206ENST00000474564 OR2S2Q9NQN1 319 aa8.58□□□□□ -1.04
COL12A1-206ENST00000474564 GNG12Q9UBI6 72 aa8.58□□□□□ -1.04
COL12A1-206ENST00000474564 RPUSD1Q9UJJ7 312 aaKnown RBP8.58□□□□□ -1.04
COL12A1-206ENST00000474564 TANC2Q9HCD6 1990 aa8.58□□□□□ -1.04
COL12A1-206ENST00000474564 IGHV4-30-2A0A087WSY4 118 aa8.57□□□□□ -1.04
COL12A1-206ENST00000474564 B4DSR2 109 aa8.57□□□□□ -1.04
COL12A1-206ENST00000474564 SDCBPO00560 298 aaPredicted RBP8.57□□□□□ -1.04
COL12A1-206ENST00000474564 PRAF2O60831 178 aa8.57□□□□□ -1.04
COL12A1-206ENST00000474564 HBZP02008 142 aa8.57□□□□□ -1.04
COL12A1-206ENST00000474564 RBP4P02753 201 aa8.57□□□□□ -1.04
COL12A1-206ENST00000474564 GSTT2P0CG29 244 aa8.57□□□□□ -1.04
COL12A1-206ENST00000474564 OR5H8P0DN80 308 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms