RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 STK17BO94768 372 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 SOX14O95416 240 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 DBIP07108 87 aaKnown RBP2.94□□□□□ -1.94
UBR3-208ENST00000474426 ZGLP1P0C6A0 271 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 GP9P14770 177 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 PGCP20142 388 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 ADMP35318 185 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 RPS10P46783 165 aaKnown RBP2.94□□□□□ -1.94
UBR3-208ENST00000474426 CDSNQ15517 529 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 ZNF684Q5T5D7 378 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 IZUMO1Q8IYV9 350 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 LRRC57Q8N9N7 239 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 PIFOQ8TCI5 191 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 PHYHIPLQ96FC7 376 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 ZNF681Q96N22 645 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 GFI1Q99684 422 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 MEIS3Q99687 375 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 PRADC1Q9BSG0 188 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 OR2H1Q9GZK4 316 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 RPS10P5Q9NQ39 176 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 CISHQ9NSE2 258 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 KLHL13Q9P2N7 655 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 MRPS16Q9Y3D3 137 aaKnown RBP2.94□□□□□ -1.94
UBR3-208ENST00000474426 TCRBV7S2A1N4TA0A589 114 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 F8VVB4 439 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 F8VWA3 439 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 C1QL1O75973 258 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 TIAF1O95411 115 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 HPXP02790 462 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 SPINK8P0C7L1 97 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 AKAIN1P0CW23 69 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 GATA1P15976 413 aaPredicted RBP2.94□□□□□ -1.94
UBR3-208ENST00000474426 IGFBP3P17936 291 aaPredicted RBP2.94□□□□□ -1.94
UBR3-208ENST00000474426 CTRLP40313 264 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 PSG9Q00887 426 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 TIMM50Q3ZCQ8 353 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 C9orf139Q6ZV77 190 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 MOB3BQ86TA1 216 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 PPP1R27Q86WC6 154 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 DEFB107AQ8IZN7 70 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 Q8N1Y9 231 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 METTL27Q8N6F8 245 aaPredicted RBP2.94□□□□□ -1.94
UBR3-208ENST00000474426 RBMXL3Q8N7X1 1067 aaKnown RBP2.94□□□□□ -1.94
UBR3-208ENST00000474426 NAT16Q8N8M0 369 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 OR5AR1Q8NGP9 310 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 JOSD2Q8TAC2 188 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 CLEC4DQ8WXI8 215 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 FBXL15Q9H469 300 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 EDA2RQ9HAV5 297 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 RARRES3Q9UL19 164 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 NTNG1Q9Y2I2 539 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 TNRC6AQ8NDV7 1962 aaKnown RBP2.94□□□□□ -1.94
UBR3-208ENST00000474426 TMEM235A6NFC5 223 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 OR51F1A6NGY5 319 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 GABRPO00591 440 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 HIST1H2ABP04908 130 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 IGLC6P0CF74 106 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 LOXP28300 417 aaPredicted RBP2.94□□□□□ -1.94
UBR3-208ENST00000474426 RPL13AP40429 203 aaKnown RBP2.94□□□□□ -1.94
UBR3-208ENST00000474426 PTH2RP49190 550 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 UBE2E1P51965 193 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 YPEL3P61236 119 aaPredicted RBP2.94□□□□□ -1.94
UBR3-208ENST00000474426 HIST1H3AP68431 136 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 SLC35A1P78382 337 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 H3F3AP84243 136 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 MELKQ14680 651 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 ZNF146Q15072 292 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 ST3GAL2Q16842 350 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 C2orf68Q2NKX9 166 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 TEX36Q5VZQ5 186 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 HIST3H2AQ7L7L0 130 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 MOB1BQ7L9L4 216 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 PIP4P1Q86T03 277 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 LRP11Q86VZ4 500 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 CLDN19Q8N6F1 224 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 TPRX1Q8N7U7 411 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 ZDHHC22Q8N966 263 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 OR2T35Q8NGX2 323 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 OR4C3Q8NH37 302 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 DOK4Q8TEW6 326 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 TMEM37Q8WXS4 190 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 UBE2E3Q969T4 207 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 NUS1Q96E22 293 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 SDSLQ96GA7 329 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 UBE2E2Q96LR5 201 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 OR4K3Q96R72 315 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 LINC01587Q99440 93 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 MRPL45Q9BRJ2 306 aaKnown RBP2.94□□□□□ -1.94
UBR3-208ENST00000474426 MLST8Q9BVC4 326 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 WDR61Q9GZS3 305 aaKnown RBP2.94□□□□□ -1.94
UBR3-208ENST00000474426 MOB1AQ9H8S9 216 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 MARCH5Q9NX47 278 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 CISD1Q9NZ45 108 aaKnown RBP2.94□□□□□ -1.94
UBR3-208ENST00000474426 OAZ3Q9UMX2 235 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 KLF12Q9Y4X4 402 aa2.94□□□□□ -1.94
UBR3-208ENST00000474426 PRG4Q92954 1404 aaPredicted RBP2.94□□□□□ -1.94
UBR3-208ENST00000474426 TMEM212A6NML5 194 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 HMSDA8MTL9 139 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 PRKACGP22612 351 aa2.93□□□□□ -1.94
UBR3-208ENST00000474426 TAF6P49848 677 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms