RNA–Protein interactions for RNA: ENST00000474254.5

CPA4-205, Transcript of carboxypeptidase A4, humanhuman

TSL 1 (best)

Gene CPA4, Length 1,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-205ENST00000474254 GABPB1Q06547 395 aaPredicted RBP13.02□□□□□ -0.33
CPA4-205ENST00000474254 RBM39Q14498 530 aaKnown RBP13.02□□□□□ -0.33
CPA4-205ENST00000474254 ATAD3CQ5T2N8 411 aa13.02□□□□□ -0.33
CPA4-205ENST00000474254 AWAT2Q6E213 333 aa13.02□□□□□ -0.33
CPA4-205ENST00000474254 NDUFA11Q86Y39 141 aa13.02□□□□□ -0.33
CPA4-205ENST00000474254 RFESDQ8TAC1 157 aa13.02□□□□□ -0.33
CPA4-205ENST00000474254 WIPF2Q8TF74 440 aaPredicted RBP13.02□□□□□ -0.33
CPA4-205ENST00000474254 OR5M11Q96RB7 305 aa13.02□□□□□ -0.33
CPA4-205ENST00000474254 UQCC2Q9BRT2 126 aa13.02□□□□□ -0.33
CPA4-205ENST00000474254 LIN7BQ9HAP6 207 aa13.02□□□□□ -0.33
CPA4-205ENST00000474254 NECAP2Q9NVZ3 263 aa13.02□□□□□ -0.33
CPA4-205ENST00000474254 SCN3BQ9NY72 215 aa13.02□□□□□ -0.33
CPA4-205ENST00000474254 PSG11Q9UQ72 335 aa13.02□□□□□ -0.33
CPA4-205ENST00000474254 NOTCH3Q9UM47 2321 aa13.02□□□□□ -0.33
CPA4-205ENST00000474254 PTGES3LE9PB15 166 aa13.01□□□□□ -0.33
CPA4-205ENST00000474254 H3BUI4 141 aa13.01□□□□□ -0.33
CPA4-205ENST00000474254 MYF6P23409 242 aa13.01□□□□□ -0.33
CPA4-205ENST00000474254 CD24P25063 80 aa13.01□□□□□ -0.33
CPA4-205ENST00000474254 LOXL3P58215 753 aa13.01□□□□□ -0.33
CPA4-205ENST00000474254 BLCAPP62952 87 aa13.01□□□□□ -0.33
CPA4-205ENST00000474254 IRF3Q14653 427 aa13.01□□□□□ -0.33
CPA4-205ENST00000474254 SPHARQ15513 63 aa13.01□□□□□ -0.33
CPA4-205ENST00000474254 OXLD1Q5BKU9 147 aa13.01□□□□□ -0.33
CPA4-205ENST00000474254 ZNF497Q6ZNH5 498 aa13.01□□□□□ -0.33
CPA4-205ENST00000474254 Q6ZS46 218 aa13.01□□□□□ -0.33
CPA4-205ENST00000474254 SLC16A12Q6ZSM3 486 aa13.01□□□□□ -0.33
CPA4-205ENST00000474254 MS4A15Q8N5U1 240 aa13.01□□□□□ -0.33
CPA4-205ENST00000474254 NEK7Q8TDX7 302 aa13.01□□□□□ -0.33
CPA4-205ENST00000474254 LEAP2Q969E1 77 aa13.01□□□□□ -0.33
CPA4-205ENST00000474254 TOMM40LQ969M1 308 aa13.01□□□□□ -0.33
CPA4-205ENST00000474254 RPEQ96AT9 228 aa13.01□□□□□ -0.33
CPA4-205ENST00000474254 AKR1E2Q96JD6 320 aa13.01□□□□□ -0.33
CPA4-205ENST00000474254 ANKRD60Q9BZ19 345 aa13.01□□□□□ -0.33
CPA4-205ENST00000474254 WNT10AQ9GZT5 417 aa13.01□□□□□ -0.33
CPA4-205ENST00000474254 FAM90A10PA6NDY2 464 aa13□□□□□ -0.33
CPA4-205ENST00000474254 FAM90A18PA6NE21 464 aa13□□□□□ -0.33
CPA4-205ENST00000474254 FAM90A16PA6NEW6 464 aa13□□□□□ -0.33
CPA4-205ENST00000474254 FAM90A20PA6NIJ5 464 aa13□□□□□ -0.33
CPA4-205ENST00000474254 FAM90A7PA6NKC0 464 aa13□□□□□ -0.33
CPA4-205ENST00000474254 FAM90A12PA8MX19 464 aa13□□□□□ -0.33
CPA4-205ENST00000474254 FAM90A5PA8MXJ8 464 aa13□□□□□ -0.33
CPA4-205ENST00000474254 FAM90A23PA8MXZ1 464 aa13□□□□□ -0.33
CPA4-205ENST00000474254 IGHV3-7P01780 117 aa13□□□□□ -0.33
CPA4-205ENST00000474254 FAM90A15PP0C7V4 464 aa13□□□□□ -0.33
CPA4-205ENST00000474254 FAM90A13PP0C7W8 464 aa13□□□□□ -0.33
CPA4-205ENST00000474254 FAM90A14PP0C7W9 464 aa13□□□□□ -0.33
CPA4-205ENST00000474254 FAM90A24PP0C7X0 464 aa13□□□□□ -0.33
CPA4-205ENST00000474254 MGMTP16455 207 aa13□□□□□ -0.33
CPA4-205ENST00000474254 GZMHP20718 246 aa13□□□□□ -0.33
CPA4-205ENST00000474254 MNDAP41218 407 aa13□□□□□ -0.33
CPA4-205ENST00000474254 GP2P55259 537 aaKnown RBP13□□□□□ -0.33
CPA4-205ENST00000474254 MADCAM1Q13477 382 aa13□□□□□ -0.33
CPA4-205ENST00000474254 INSL4Q14641 139 aa13□□□□□ -0.33
CPA4-205ENST00000474254 LTC4SQ16873 150 aa13□□□□□ -0.33
CPA4-205ENST00000474254 TMEM95Q3KNT9 176 aa13□□□□□ -0.33
CPA4-205ENST00000474254 ACSM3Q53FZ2 586 aa13□□□□□ -0.33
CPA4-205ENST00000474254 FAM27D1Q5T7N8 215 aa13□□□□□ -0.33
CPA4-205ENST00000474254 UNQ9370/PRO34162Q6UXP9 181 aa13□□□□□ -0.33
CPA4-205ENST00000474254 TMEM104Q8NE00 496 aa13□□□□□ -0.33
CPA4-205ENST00000474254 Q96M66 194 aa13□□□□□ -0.33
CPA4-205ENST00000474254 SLC25A33Q9BSK2 321 aa13□□□□□ -0.33
CPA4-205ENST00000474254 A0A1W2PPI3 338 aa12.99□□□□□ -0.33
CPA4-205ENST00000474254 H0YHG0 523 aa12.99□□□□□ -0.33
CPA4-205ENST00000474254 C15orf65H3BRN8 121 aa12.99□□□□□ -0.33
CPA4-205ENST00000474254 AIPO00170 330 aa12.99□□□□□ -0.33
CPA4-205ENST00000474254 SC5DO75845 299 aa12.99□□□□□ -0.33
CPA4-205ENST00000474254 OR2F2O95006 317 aa12.99□□□□□ -0.33
CPA4-205ENST00000474254 VDAC2P45880 294 aaPredicted RBP12.99□□□□□ -0.33
CPA4-205ENST00000474254 GNG10P50151 68 aa12.99□□□□□ -0.33
CPA4-205ENST00000474254 GPR50Q13585 617 aa12.99□□□□□ -0.33
CPA4-205ENST00000474254 RAB12Q6IQ22 244 aa12.99□□□□□ -0.33
CPA4-205ENST00000474254 GAPTQ8N292 157 aa12.99□□□□□ -0.33
CPA4-205ENST00000474254 OR52M1Q8NGK5 317 aa12.99□□□□□ -0.33
CPA4-205ENST00000474254 CAPSLQ8WWF8 208 aa12.99□□□□□ -0.33
CPA4-205ENST00000474254 PHYHIPQ92561 330 aa12.99□□□□□ -0.33
CPA4-205ENST00000474254 RBM14Q96PK6 669 aaKnown RBP12.99□□□□□ -0.33
CPA4-205ENST00000474254 CITED2Q99967 270 aaPredicted RBP12.99□□□□□ -0.33
CPA4-205ENST00000474254 TMED9Q9BVK6 235 aa12.99□□□□□ -0.33
CPA4-205ENST00000474254 SELENOIQ9C0D9 397 aa12.99□□□□□ -0.33
CPA4-205ENST00000474254 VCX3BQ9H321 246 aa12.99□□□□□ -0.33
CPA4-205ENST00000474254 BANF2Q9H503 90 aa12.99□□□□□ -0.33
CPA4-205ENST00000474254 DUSP21Q9H596 190 aa12.99□□□□□ -0.33
CPA4-205ENST00000474254 AURKAIP1Q9NWT8 199 aaPredicted RBP12.99□□□□□ -0.33
CPA4-205ENST00000474254 TPRKBQ9Y3C4 175 aa12.99□□□□□ -0.33
CPA4-205ENST00000474254 FAM90A9PA6NNJ1 464 aa12.98□□□□□ -0.33
CPA4-205ENST00000474254 MCRIP1C9JLW8 97 aa12.98□□□□□ -0.33
CPA4-205ENST00000474254 ORC5O43913 435 aa12.98□□□□□ -0.33
CPA4-205ENST00000474254 CRTAPO75718 401 aaPredicted RBP12.98□□□□□ -0.33
CPA4-205ENST00000474254 MT-ND4P03905 459 aa12.98□□□□□ -0.33
CPA4-205ENST00000474254 MED22Q15528 200 aa12.98□□□□□ -0.33
CPA4-205ENST00000474254 RBM48Q5RL73 367 aaKnown RBP12.98□□□□□ -0.33
CPA4-205ENST00000474254 LRRTM1Q86UE6 522 aa12.98□□□□□ -0.33
CPA4-205ENST00000474254 ARL11Q969Q4 196 aa12.98□□□□□ -0.33
CPA4-205ENST00000474254 OCSTAMPQ9BR26 566 aa12.98□□□□□ -0.33
CPA4-205ENST00000474254 CST11Q9H112 138 aa12.98□□□□□ -0.33
CPA4-205ENST00000474254 ETAA1Q9NY74 926 aa12.98□□□□□ -0.33
CPA4-205ENST00000474254 GHRLQ9UBU3 117 aa12.98□□□□□ -0.33
CPA4-205ENST00000474254 ERICH4A6NGS2 130 aa12.97□□□□□ -0.33
CPA4-205ENST00000474254 RGS10O43665 173 aa12.97□□□□□ -0.33
CPA4-205ENST00000474254 CA11O75493 328 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms