RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 PRORYQ9H606 182 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 DECR2Q9NUI1 292 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 RASL12Q9NYN1 266 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 FBXO9Q9UK97 447 aaPredicted RBP5.23□□□□□ -1.57
CLK1-210ENST00000473565 IGKV1D-17A0A075B6S4 117 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 L7N2F9 121 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 PSG2P11465 335 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 TUBG1P23258 451 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 PTAFRP25105 342 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 CD200P41217 278 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 OR3A1P47881 315 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 CASP6P55212 293 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 SURF2Q15527 256 aaPredicted RBP5.23□□□□□ -1.57
CLK1-210ENST00000473565 LTC4SQ16873 150 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 MEX3BQ6ZN04 569 aaKnown RBP5.23□□□□□ -1.57
CLK1-210ENST00000473565 FGFRL1Q8N441 504 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 KDF1Q8NAX2 398 aaPredicted RBP5.23□□□□□ -1.57
CLK1-210ENST00000473565 ZNRF1Q8ND25 227 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 ST6GALNAC3Q8NDV1 305 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 COQ8AQ8NI60 647 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 RFESDQ8TAC1 157 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 LHFPL5Q8TAF8 219 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 MRGPRDQ8TDS7 321 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 TP53RKQ96S44 253 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 SLC5A7Q9GZV3 580 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 NAA60Q9H7X0 242 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 IFT22Q9H7X7 185 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 TAF9BQ9HBM6 251 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 TUBG2Q9NRH3 451 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 DNAJB11Q9UBS4 358 aa5.23□□□□□ -1.57
CLK1-210ENST00000473565 ERRFI1Q9UJM3 462 aaPredicted RBP5.23□□□□□ -1.57
CLK1-210ENST00000473565 IGHV3-43A0A0B4J1X8 118 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 KIR2DS1A0A191URI9 304 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 A0A1B0GWJ7 208 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 PHF1O43189 567 aaPredicted RBP5.22□□□□□ -1.57
CLK1-210ENST00000473565 IGHV3-43DP0DP04 118 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 KIR2DS4P43632 304 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 TNFAIP6P98066 277 aaPredicted RBP5.22□□□□□ -1.57
CLK1-210ENST00000473565 GNMTQ14749 295 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 KIR2DS1Q14954 304 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 OPCMLQ14982 345 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 SMIM21Q3B7S5 101 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 ZNF880Q6PDB4 577 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 GSG1LQ6UXU4 331 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 LYZL2Q7Z4W2 148 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 SPERTQ8NA61 448 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 POM121Q96HA1 1249 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 ARL6Q9H0F7 186 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 SLA2Q9H6Q3 261 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 MBD2Q9UBB5 411 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 WIPI2Q9Y4P8 454 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 SRRM5B3KS81 715 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 PRSS44E7EML9 344 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 H0YIZ8 118 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 HSPA12AO43301 675 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 TPD52L2O43399 206 aaKnown RBP5.22□□□□□ -1.57
CLK1-210ENST00000473565 DIRAS3O95661 229 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 CD8AP01732 235 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 IGHV3-7P01780 117 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 PRDX2P32119 198 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 SSTR5P35346 364 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 HTR2BP41595 481 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 UQCRFS1P47985 274 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 RPS23P62266 143 aaKnown RBP5.22□□□□□ -1.57
CLK1-210ENST00000473565 TMEM187Q14656 261 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 C3orf36Q3SXR2 165 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 FIP1L1Q6UN15 594 aaKnown RBP5.22□□□□□ -1.57
CLK1-210ENST00000473565 TMUB2Q71RG4 321 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 TBC1D26Q86UD7 250 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 ZNF546Q86UE3 836 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 DMRTC2Q8IXT2 367 aaPredicted RBP5.22□□□□□ -1.57
CLK1-210ENST00000473565 ZNF565Q8N9K5 539 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 OR52L2PQ8NGH6 319 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 OR13A1Q8NGR1 328 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 OR10J5Q8NHC4 309 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 RSRP1Q9BUV0 290 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 GON7Q9BXV9 100 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 MFFQ9GZY8 342 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 SHARPINQ9H0F6 387 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 GCM1Q9NP62 436 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 COMMD9Q9P000 198 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 RNF150Q9ULK6 438 aa5.22□□□□□ -1.57
CLK1-210ENST00000473565 USP9XQ93008 2570 aaPredicted RBP5.21□□□□□ -1.57
CLK1-210ENST00000473565 TRBV6-7A0A0A0MS04 114 aa5.21□□□□□ -1.57
CLK1-210ENST00000473565 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.21□□□□□ -1.57
CLK1-210ENST00000473565 C12orf77C9JDV5 145 aa5.21□□□□□ -1.57
CLK1-210ENST00000473565 E7EQL1 145 aa5.21□□□□□ -1.57
CLK1-210ENST00000473565 M0R233 179 aa5.21□□□□□ -1.57
CLK1-210ENST00000473565 SIAH2O43255 324 aa5.21□□□□□ -1.57
CLK1-210ENST00000473565 TUSC2O75896 110 aa5.21□□□□□ -1.57
CLK1-210ENST00000473565 HLA-GP17693 338 aa5.21□□□□□ -1.57
CLK1-210ENST00000473565 SELENOVP59797 346 aa5.21□□□□□ -1.57
CLK1-210ENST00000473565 S100A10P60903 97 aa5.21□□□□□ -1.57
CLK1-210ENST00000473565 Q6ZS49 121 aa5.21□□□□□ -1.57
CLK1-210ENST00000473565 SLC38A6Q8IZM9 456 aa5.21□□□□□ -1.57
CLK1-210ENST00000473565 GLYATL2Q8WU03 294 aa5.21□□□□□ -1.57
CLK1-210ENST00000473565 RIMS4Q9H426 269 aaPredicted RBP5.21□□□□□ -1.57
CLK1-210ENST00000473565 OR5AC2Q9NZP5 309 aa5.21□□□□□ -1.57
CLK1-210ENST00000473565 YLPM1P49750 1951 aaKnown RBP5.21□□□□□ -1.57
CLK1-210ENST00000473565 CRYBG3Q68DQ2 2970 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms