RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 STX5Q13190 355 aa3.57□□□□□ -1.84
SEC22A-204ENST00000473494 MED21Q13503 144 aa3.57□□□□□ -1.84
SEC22A-204ENST00000473494 UAP1Q16222 522 aaPredicted RBP3.57□□□□□ -1.84
SEC22A-204ENST00000473494 TEX30Q5JUR7 227 aa3.57□□□□□ -1.84
SEC22A-204ENST00000473494 CLLU1OSQ5K130 101 aa3.57□□□□□ -1.84
SEC22A-204ENST00000473494 COL27A1Q8IZC6 1860 aaPredicted RBP3.57□□□□□ -1.84
SEC22A-204ENST00000473494 OR1L1Q8NH94 360 aa3.57□□□□□ -1.84
SEC22A-204ENST00000473494 TMEM234Q8WY98 164 aa3.57□□□□□ -1.84
SEC22A-204ENST00000473494 CDS1Q92903 461 aa3.57□□□□□ -1.84
SEC22A-204ENST00000473494 CPNE4Q96A23 557 aaPredicted RBP3.57□□□□□ -1.84
SEC22A-204ENST00000473494 RERGQ96A58 199 aaPredicted RBP3.57□□□□□ -1.84
SEC22A-204ENST00000473494 CIB1Q99828 191 aa3.57□□□□□ -1.84
SEC22A-204ENST00000473494 LXNQ9BS40 222 aa3.57□□□□□ -1.84
SEC22A-204ENST00000473494 COPS4Q9BT78 406 aa3.57□□□□□ -1.84
SEC22A-204ENST00000473494 DCUN1D5Q9BTE7 237 aa3.57□□□□□ -1.84
SEC22A-204ENST00000473494 CHCHD7Q9BUK0 85 aa3.57□□□□□ -1.84
SEC22A-204ENST00000473494 METTL8Q9H825 291 aaKnown RBP3.57□□□□□ -1.84
SEC22A-204ENST00000473494 PLEKHF2Q9H8W4 249 aa3.57□□□□□ -1.84
SEC22A-204ENST00000473494 FBXO8Q9NRD0 319 aa3.57□□□□□ -1.84
SEC22A-204ENST00000473494 RBFOX1Q9NWB1 397 aaKnown RBP3.57□□□□□ -1.84
SEC22A-204ENST00000473494 RHBDL2Q9NX52 303 aa3.57□□□□□ -1.84
SEC22A-204ENST00000473494 SIGLEC7Q9Y286 467 aa3.57□□□□□ -1.84
SEC22A-204ENST00000473494 KLF12Q9Y4X4 402 aa3.57□□□□□ -1.84
SEC22A-204ENST00000473494 CUL9Q8IWT3 2517 aa3.56□□□□□ -1.84
SEC22A-204ENST00000473494 TTC28Q96AY4 2481 aa3.56□□□□□ -1.84
SEC22A-204ENST00000473494 GOLGA8JA6NMD2 632 aa3.56□□□□□ -1.84
SEC22A-204ENST00000473494 CENPBD1B2RD01 187 aa3.56□□□□□ -1.84
SEC22A-204ENST00000473494 SEC14L6B5MCN3 397 aa3.56□□□□□ -1.84
SEC22A-204ENST00000473494 GOLGA8KD6RF30 607 aa3.56□□□□□ -1.84
SEC22A-204ENST00000473494 GOLGA8MH3BSY2 632 aa3.56□□□□□ -1.84
SEC22A-204ENST00000473494 SULT1C2O00338 296 aa3.56□□□□□ -1.84
SEC22A-204ENST00000473494 PSPHP1O15172 72 aa3.56□□□□□ -1.84
SEC22A-204ENST00000473494 ALOX12BO75342 701 aa3.56□□□□□ -1.84
SEC22A-204ENST00000473494 RPP14O95059 124 aaKnown RBP3.56□□□□□ -1.84
SEC22A-204ENST00000473494 TTC4O95801 387 aa3.56□□□□□ -1.84
SEC22A-204ENST00000473494 PTHP01270 115 aa3.56□□□□□ -1.84
SEC22A-204ENST00000473494 TRBV12-3P01733 135 aa3.56□□□□□ -1.84
SEC22A-204ENST00000473494 IL9P15248 144 aa3.56□□□□□ -1.84
SEC22A-204ENST00000473494 CXCR1P25024 350 aa3.56□□□□□ -1.84
SEC22A-204ENST00000473494 PMELP40967 661 aa3.56□□□□□ -1.84
SEC22A-204ENST00000473494 TAS2R60P59551 318 aa3.56□□□□□ -1.84
SEC22A-204ENST00000473494 ACTBP60709 375 aa3.56□□□□□ -1.84
SEC22A-204ENST00000473494 ACTG1P63261 375 aa3.56□□□□□ -1.84
SEC22A-204ENST00000473494 IFFO1Q0D2I5 559 aa3.56□□□□□ -1.84
SEC22A-204ENST00000473494 IDNKQ5T6J7 187 aa3.56□□□□□ -1.84
SEC22A-204ENST00000473494 IGFL3Q6UXB1 125 aa3.56□□□□□ -1.84
SEC22A-204ENST00000473494 SSX7Q7RTT5 188 aa3.56□□□□□ -1.84
SEC22A-204ENST00000473494 TMEM156Q8N614 296 aa3.56□□□□□ -1.84
SEC22A-204ENST00000473494 LRRC52Q8N7C0 313 aa3.56□□□□□ -1.84
SEC22A-204ENST00000473494 ZNF645Q8N7E2 425 aa3.56□□□□□ -1.84
SEC22A-204ENST00000473494 OR51A7Q8NH64 312 aa3.56□□□□□ -1.84
SEC22A-204ENST00000473494 GHSRQ92847 366 aa3.56□□□□□ -1.84
SEC22A-204ENST00000473494 SMARCD1Q96GM5 515 aa3.56□□□□□ -1.84
SEC22A-204ENST00000473494 OR4K3Q96R72 315 aa3.56□□□□□ -1.84
SEC22A-204ENST00000473494 OSBPL11Q9BXB4 747 aa3.56□□□□□ -1.84
SEC22A-204ENST00000473494 ENOPH1Q9UHY7 261 aa3.56□□□□□ -1.84
SEC22A-204ENST00000473494 S4R3C0 116 aa3.56□□□□□ -1.84
SEC22A-204ENST00000473494 MYH11P35749 1972 aa3.56□□□□□ -1.84
SEC22A-204ENST00000473494 PLXNA3P51805 1871 aa3.56□□□□□ -1.84
SEC22A-204ENST00000473494 TMEM131Q92545 1883 aa3.56□□□□□ -1.84
SEC22A-204ENST00000473494 TRIOO75962 3097 aa3.55□□□□□ -1.84
SEC22A-204ENST00000473494 VWA8A3KMH1 1905 aa3.55□□□□□ -1.84
SEC22A-204ENST00000473494 TRAV8-7A0A075B6U6 113 aa3.55□□□□□ -1.84
SEC22A-204ENST00000473494 H3BQV1 296 aa3.55□□□□□ -1.84
SEC22A-204ENST00000473494 M0QZ92 97 aa3.55□□□□□ -1.84
SEC22A-204ENST00000473494 DFFAO00273 331 aa3.55□□□□□ -1.84
SEC22A-204ENST00000473494 ZNF189O75820 626 aaPredicted RBP3.55□□□□□ -1.84
SEC22A-204ENST00000473494 HLA-DQB1P01920 261 aa3.55□□□□□ -1.84
SEC22A-204ENST00000473494 CTXN2P0C2S0 81 aa3.55□□□□□ -1.84
SEC22A-204ENST00000473494 IL1RNP18510 177 aa3.55□□□□□ -1.84
SEC22A-204ENST00000473494 ARL2P36404 184 aa3.55□□□□□ -1.84
SEC22A-204ENST00000473494 COILP38432 576 aaPredicted RBP3.55□□□□□ -1.84
SEC22A-204ENST00000473494 MAGEA3P43357 314 aa3.55□□□□□ -1.84
SEC22A-204ENST00000473494 RPL31P62899 125 aaKnown RBP3.55□□□□□ -1.84
SEC22A-204ENST00000473494 RPL10AP62906 217 aaKnown RBP3.55□□□□□ -1.84
SEC22A-204ENST00000473494 PAFAH1B2P68402 229 aa3.55□□□□□ -1.84
SEC22A-204ENST00000473494 LAMTOR4Q0VGL1 99 aa3.55□□□□□ -1.84
SEC22A-204ENST00000473494 NAB1Q13506 487 aa3.55□□□□□ -1.84
SEC22A-204ENST00000473494 KRTAP13-3Q3SY46 172 aa3.55□□□□□ -1.84
SEC22A-204ENST00000473494 C6orf99Q4VX62 202 aa3.55□□□□□ -1.84
SEC22A-204ENST00000473494 RBM48Q5RL73 367 aaKnown RBP3.55□□□□□ -1.84
SEC22A-204ENST00000473494 TIMM23BQ5SRD1 257 aa3.55□□□□□ -1.84
SEC22A-204ENST00000473494 CLVS2Q5SYC1 327 aa3.55□□□□□ -1.84
SEC22A-204ENST00000473494 TMEM236Q5W0B7 351 aa3.55□□□□□ -1.84
SEC22A-204ENST00000473494 GUSBP11Q6P575 273 aa3.55□□□□□ -1.84
SEC22A-204ENST00000473494 OPN5Q6U736 354 aa3.55□□□□□ -1.84
SEC22A-204ENST00000473494 STX12Q86Y82 276 aa3.55□□□□□ -1.84
SEC22A-204ENST00000473494 CYP4Z2PQ8N1L4 340 aa3.55□□□□□ -1.84
SEC22A-204ENST00000473494 ZNF709Q8N972 641 aa3.55□□□□□ -1.84
SEC22A-204ENST00000473494 SPANXA2-OT1Q8N9U9 137 aa3.55□□□□□ -1.84
SEC22A-204ENST00000473494 OR9A2Q8NGT5 310 aa3.55□□□□□ -1.84
SEC22A-204ENST00000473494 RNASEH2CQ8TDP1 164 aaKnown RBP3.55□□□□□ -1.84
SEC22A-204ENST00000473494 RXFP2Q8WXD0 754 aa3.55□□□□□ -1.84
SEC22A-204ENST00000473494 TMBIM4Q9HC24 238 aa3.55□□□□□ -1.84
SEC22A-204ENST00000473494 NLE1Q9NVX2 485 aaPredicted RBP3.55□□□□□ -1.84
SEC22A-204ENST00000473494 PLEKHJ1Q9NW61 149 aa3.55□□□□□ -1.84
SEC22A-204ENST00000473494 FBXL3Q9UKT7 428 aa3.55□□□□□ -1.84
SEC22A-204ENST00000473494 ZNF835Q9Y2P0 537 aa3.55□□□□□ -1.84
SEC22A-204ENST00000473494 TBL2Q9Y4P3 447 aaKnown RBP3.55□□□□□ -1.84
SEC22A-204ENST00000473494 LRRC42Q9Y546 428 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms