RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 MUL1Q969V5 352 aa7.19□□□□□ -1.26
USF1-204ENST00000472217 R3HDM4Q96D70 268 aa7.19□□□□□ -1.26
USF1-204ENST00000472217 PCDHB16Q9NRJ7 776 aa7.19□□□□□ -1.26
USF1-204ENST00000472217 PSORS1C1Q9UIG5 152 aa7.19□□□□□ -1.26
USF1-204ENST00000472217 MRPS28Q9Y2Q9 187 aaKnown RBP7.19□□□□□ -1.26
USF1-204ENST00000472217 KIAA2026Q5HYC2 2103 aa7.19□□□□□ -1.26
USF1-204ENST00000472217 A0A1W2PRX2 142 aa7.18□□□□□ -1.26
USF1-204ENST00000472217 FAM90A18PA6NE21 464 aa7.18□□□□□ -1.26
USF1-204ENST00000472217 FAM90A16PA6NEW6 464 aa7.18□□□□□ -1.26
USF1-204ENST00000472217 FAM90A20PA6NIJ5 464 aa7.18□□□□□ -1.26
USF1-204ENST00000472217 FAM90A9PA6NNJ1 464 aa7.18□□□□□ -1.26
USF1-204ENST00000472217 FAM90A12PA8MX19 464 aa7.18□□□□□ -1.26
USF1-204ENST00000472217 FAM90A5PA8MXJ8 464 aa7.18□□□□□ -1.26
USF1-204ENST00000472217 ANKRD65E5RJM6 399 aa7.18□□□□□ -1.26
USF1-204ENST00000472217 MYL12BO14950 172 aa7.18□□□□□ -1.26
USF1-204ENST00000472217 MAS1P04201 325 aa7.18□□□□□ -1.26
USF1-204ENST00000472217 FAM90A15PP0C7V4 464 aa7.18□□□□□ -1.26
USF1-204ENST00000472217 FAM90A13PP0C7W8 464 aa7.18□□□□□ -1.26
USF1-204ENST00000472217 FAM90A14PP0C7W9 464 aa7.18□□□□□ -1.26
USF1-204ENST00000472217 FAM90A24PP0C7X0 464 aa7.18□□□□□ -1.26
USF1-204ENST00000472217 GZMHP20718 246 aa7.18□□□□□ -1.26
USF1-204ENST00000472217 RAB7AP51149 207 aa7.18□□□□□ -1.26
USF1-204ENST00000472217 GPR176Q14439 515 aa7.18□□□□□ -1.26
USF1-204ENST00000472217 HES1Q14469 280 aa7.18□□□□□ -1.26
USF1-204ENST00000472217 TCTEX1D4Q5JR98 221 aa7.18□□□□□ -1.26
USF1-204ENST00000472217 C9orf152Q5JTZ5 239 aa7.18□□□□□ -1.26
USF1-204ENST00000472217 KPRPQ5T749 579 aaPredicted RBP7.18□□□□□ -1.26
USF1-204ENST00000472217 AWAT2Q6E213 333 aa7.18□□□□□ -1.26
USF1-204ENST00000472217 C10orf99Q6UWK7 81 aa7.18□□□□□ -1.26
USF1-204ENST00000472217 GLIPR1L1Q6UWM5 242 aa7.18□□□□□ -1.26
USF1-204ENST00000472217 ZNF497Q6ZNH5 498 aa7.18□□□□□ -1.26
USF1-204ENST00000472217 SLC16A12Q6ZSM3 486 aa7.18□□□□□ -1.26
USF1-204ENST00000472217 CENPVQ7Z7K6 275 aaPredicted RBP7.18□□□□□ -1.26
USF1-204ENST00000472217 DRAM1Q8N682 238 aa7.18□□□□□ -1.26
USF1-204ENST00000472217 NANOGP1Q8N7R0 232 aa7.18□□□□□ -1.26
USF1-204ENST00000472217 OR4F17Q8NGA8 305 aa7.18□□□□□ -1.26
USF1-204ENST00000472217 OR10X1Q8NGY0 326 aa7.18□□□□□ -1.26
USF1-204ENST00000472217 UBALD1Q8TB05 177 aa7.18□□□□□ -1.26
USF1-204ENST00000472217 CCDC107Q8WV48 283 aa7.18□□□□□ -1.26
USF1-204ENST00000472217 ARL11Q969Q4 196 aa7.18□□□□□ -1.26
USF1-204ENST00000472217 DERL3Q96Q80 235 aa7.18□□□□□ -1.26
USF1-204ENST00000472217 OR4F4Q96R69 305 aa7.18□□□□□ -1.26
USF1-204ENST00000472217 FKBP14Q9NWM8 211 aa7.18□□□□□ -1.26
USF1-204ENST00000472217 RCC2Q9P258 522 aaKnown RBP7.18□□□□□ -1.26
USF1-204ENST00000472217 MOB4Q9Y3A3 225 aa7.18□□□□□ -1.26
USF1-204ENST00000472217 IGHV3-43A0A0B4J1X8 118 aa7.17□□□□□ -1.26
USF1-204ENST00000472217 M0QZK8 103 aa7.17□□□□□ -1.26
USF1-204ENST00000472217 AIPO00170 330 aa7.17□□□□□ -1.26
USF1-204ENST00000472217 SDCBPO00560 298 aaPredicted RBP7.17□□□□□ -1.26
USF1-204ENST00000472217 HSD17B6O14756 317 aa7.17□□□□□ -1.26
USF1-204ENST00000472217 PIN1P1O15428 100 aa7.17□□□□□ -1.26
USF1-204ENST00000472217 ORC5O43913 435 aa7.17□□□□□ -1.26
USF1-204ENST00000472217 PRB2P02812 416 aaPredicted RBP7.17□□□□□ -1.26
USF1-204ENST00000472217 MT-ND4P03905 459 aa7.17□□□□□ -1.26
USF1-204ENST00000472217 CD1AP06126 327 aa7.17□□□□□ -1.26
USF1-204ENST00000472217 FAM106CPP0CH98 169 aa7.17□□□□□ -1.26
USF1-204ENST00000472217 IGHV3-43DP0DP04 118 aa7.17□□□□□ -1.26
USF1-204ENST00000472217 OXLD1Q5BKU9 147 aa7.17□□□□□ -1.26
USF1-204ENST00000472217 FAM53AQ6NSI3 398 aaPredicted RBP7.17□□□□□ -1.26
USF1-204ENST00000472217 LYPD6Q86Y78 171 aa7.17□□□□□ -1.26
USF1-204ENST00000472217 THNSL2Q86YJ6 484 aa7.17□□□□□ -1.26
USF1-204ENST00000472217 CDH26Q8IXH8 852 aa7.17□□□□□ -1.26
USF1-204ENST00000472217 OR8H3Q8N146 312 aa7.17□□□□□ -1.26
USF1-204ENST00000472217 TMEM104Q8NE00 496 aa7.17□□□□□ -1.26
USF1-204ENST00000472217 OR52M1Q8NGK5 317 aa7.17□□□□□ -1.26
USF1-204ENST00000472217 TFAP2CQ92754 450 aa7.17□□□□□ -1.26
USF1-204ENST00000472217 MYDGFQ969H8 173 aa7.17□□□□□ -1.26
USF1-204ENST00000472217 MRPS24Q96EL2 167 aaKnown RBP7.17□□□□□ -1.26
USF1-204ENST00000472217 CYYR1Q96J86 154 aa7.17□□□□□ -1.26
USF1-204ENST00000472217 VCXQ9H320 206 aa7.17□□□□□ -1.26
USF1-204ENST00000472217 BANF2Q9H503 90 aa7.17□□□□□ -1.26
USF1-204ENST00000472217 SPACA1Q9HBV2 294 aa7.17□□□□□ -1.26
USF1-204ENST00000472217 PLXNB1O43157 2135 aa7.16□□□□□ -1.26
USF1-204ENST00000472217 IGHV1-3A0A0C4DH29 117 aa7.16□□□□□ -1.26
USF1-204ENST00000472217 C12orf77C9JDV5 145 aa7.16□□□□□ -1.26
USF1-204ENST00000472217 MCRIP1C9JLW8 97 aa7.16□□□□□ -1.26
USF1-204ENST00000472217 CCRL2O00421 344 aa7.16□□□□□ -1.26
USF1-204ENST00000472217 CRTAPO75718 401 aaPredicted RBP7.16□□□□□ -1.26
USF1-204ENST00000472217 IGKV1D-33P01593 117 aa7.16□□□□□ -1.26
USF1-204ENST00000472217 IGKV1-33P01594 117 aa7.16□□□□□ -1.26
USF1-204ENST00000472217 CDK1P06493 297 aa7.16□□□□□ -1.26
USF1-204ENST00000472217 MGMTP16455 207 aa7.16□□□□□ -1.26
USF1-204ENST00000472217 TMEM11P17152 192 aa7.16□□□□□ -1.26
USF1-204ENST00000472217 MAPK3P27361 379 aaPredicted RBP7.16□□□□□ -1.26
USF1-204ENST00000472217 VHLP40337 213 aa7.16□□□□□ -1.26
USF1-204ENST00000472217 REG1BP48304 166 aa7.16□□□□□ -1.26
USF1-204ENST00000472217 LOXL3P58215 753 aa7.16□□□□□ -1.26
USF1-204ENST00000472217 ZNF816Q0VGE8 651 aaPredicted RBP7.16□□□□□ -1.26
USF1-204ENST00000472217 HNF4GQ14541 408 aa7.16□□□□□ -1.26
USF1-204ENST00000472217 INSL4Q14641 139 aa7.16□□□□□ -1.26
USF1-204ENST00000472217 RAB12Q6IQ22 244 aa7.16□□□□□ -1.26
USF1-204ENST00000472217 GAPTQ8N292 157 aa7.16□□□□□ -1.26
USF1-204ENST00000472217 NKAIN3Q8N8D7 197 aa7.16□□□□□ -1.26
USF1-204ENST00000472217 C5orf56Q8N8D9 126 aa7.16□□□□□ -1.26
USF1-204ENST00000472217 C8orf31Q8N9H6 132 aa7.16□□□□□ -1.26
USF1-204ENST00000472217 OR4X2Q8NGF9 303 aa7.16□□□□□ -1.26
USF1-204ENST00000472217 OR4K15Q8NH41 348 aa7.16□□□□□ -1.26
USF1-204ENST00000472217 THRSPQ92748 146 aa7.16□□□□□ -1.26
USF1-204ENST00000472217 Q96M66 194 aa7.16□□□□□ -1.26
USF1-204ENST00000472217 MND1Q9BWT6 205 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms