RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 K7N7A8 449 aa7.84□□□□□ -1.15
VPS52-216ENST00000471309 LGALS8O00214 317 aa7.84□□□□□ -1.15
VPS52-216ENST00000471309 MGST3O14880 152 aa7.84□□□□□ -1.15
VPS52-216ENST00000471309 BET1O15155 118 aa7.84□□□□□ -1.15
VPS52-216ENST00000471309 GOSR1O95249 250 aa7.84□□□□□ -1.15
VPS52-216ENST00000471309 SFT2D2O95562 160 aa7.84□□□□□ -1.15
VPS52-216ENST00000471309 C1QBP02746 253 aa7.84□□□□□ -1.15
VPS52-216ENST00000471309 TFF1P04155 84 aa7.84□□□□□ -1.15
VPS52-216ENST00000471309 GIPP09681 153 aaPredicted RBP7.84□□□□□ -1.15
VPS52-216ENST00000471309 RPS2P15880 293 aaKnown RBP7.84□□□□□ -1.15
VPS52-216ENST00000471309 NFYAP23511 347 aaPredicted RBP7.84□□□□□ -1.15
VPS52-216ENST00000471309 VAMP1P23763 118 aa7.84□□□□□ -1.15
VPS52-216ENST00000471309 CD34P28906 385 aa7.84□□□□□ -1.15
VPS52-216ENST00000471309 GABRA2P47869 451 aa7.84□□□□□ -1.15
VPS52-216ENST00000471309 IL13RA1P78552 427 aa7.84□□□□□ -1.15
VPS52-216ENST00000471309 AESQ08117 197 aa7.84□□□□□ -1.15
VPS52-216ENST00000471309 KRBOX4Q5JUW0 171 aa7.84□□□□□ -1.15
VPS52-216ENST00000471309 LPCAT3Q6P1A2 487 aa7.84□□□□□ -1.15
VPS52-216ENST00000471309 H1FOOQ8IZA3 346 aaPredicted RBP7.84□□□□□ -1.15
VPS52-216ENST00000471309 ZCCHC24Q8N2G6 241 aaKnown RBP7.84□□□□□ -1.15
VPS52-216ENST00000471309 ZNF843Q8N446 348 aa7.84□□□□□ -1.15
VPS52-216ENST00000471309 OR10J5Q8NHC4 309 aa7.84□□□□□ -1.15
VPS52-216ENST00000471309 TOMM40LQ969M1 308 aa7.84□□□□□ -1.15
VPS52-216ENST00000471309 ZNF486Q96H40 463 aaPredicted RBP7.84□□□□□ -1.15
VPS52-216ENST00000471309 KIRREL1Q96J84 757 aa7.84□□□□□ -1.15
VPS52-216ENST00000471309 DMRTB1Q96MA1 342 aa7.84□□□□□ -1.15
VPS52-216ENST00000471309 PHB2Q99623 299 aa7.84□□□□□ -1.15
VPS52-216ENST00000471309 RSRP1Q9BUV0 290 aa7.84□□□□□ -1.15
VPS52-216ENST00000471309 TMPRSS13Q9BYE2 586 aa7.84□□□□□ -1.15
VPS52-216ENST00000471309 DNTTIP1Q9H147 329 aa7.84□□□□□ -1.15
VPS52-216ENST00000471309 CLEC4MQ9H2X3 399 aaPredicted RBP7.84□□□□□ -1.15
VPS52-216ENST00000471309 TAF9BQ9HBM6 251 aa7.84□□□□□ -1.15
VPS52-216ENST00000471309 CBLN4Q9NTU7 201 aa7.84□□□□□ -1.15
VPS52-216ENST00000471309 TMEM106BQ9NUM4 274 aa7.84□□□□□ -1.15
VPS52-216ENST00000471309 SHPKQ9UHJ6 478 aa7.84□□□□□ -1.15
VPS52-216ENST00000471309 OPN4Q9UHM6 478 aa7.84□□□□□ -1.15
VPS52-216ENST00000471309 ASH1LQ9NR48 2969 aaKnown RBP7.84□□□□□ -1.15
VPS52-216ENST00000471309 RAI1Q7Z5J4 1906 aaPredicted RBP7.84□□□□□ -1.16
VPS52-216ENST00000471309 CADP27708 2225 aa7.83□□□□□ -1.16
VPS52-216ENST00000471309 TRAV38-1A0A0B4J264 116 aa7.83□□□□□ -1.16
VPS52-216ENST00000471309 IGHV1-69-2A0A0G2JMI3 117 aa7.83□□□□□ -1.16
VPS52-216ENST00000471309 ODAMA1E959 279 aa7.83□□□□□ -1.16
VPS52-216ENST00000471309 CRYM-AS1A6NIL9 109 aa7.83□□□□□ -1.16
VPS52-216ENST00000471309 C19orf84I3L1E1 186 aa7.83□□□□□ -1.16
VPS52-216ENST00000471309 GOSR2O14653 212 aa7.83□□□□□ -1.16
VPS52-216ENST00000471309 C1QL1O75973 258 aa7.83□□□□□ -1.16
VPS52-216ENST00000471309 OR2A4O95047 310 aa7.83□□□□□ -1.16
VPS52-216ENST00000471309 ZNF205O95201 554 aa7.83□□□□□ -1.16
VPS52-216ENST00000471309 PRB1P04280 392 aa7.83□□□□□ -1.16
VPS52-216ENST00000471309 HLA-GP17693 338 aa7.83□□□□□ -1.16
VPS52-216ENST00000471309 PI3P19957 117 aa7.83□□□□□ -1.16
VPS52-216ENST00000471309 ERP29P30040 261 aaKnown RBP7.83□□□□□ -1.16
VPS52-216ENST00000471309 RBMXP38159 391 aaKnown RBP7.83□□□□□ -1.16
VPS52-216ENST00000471309 GLIPR1P48060 266 aa7.83□□□□□ -1.16
VPS52-216ENST00000471309 P2RX3P56373 397 aa7.83□□□□□ -1.16
VPS52-216ENST00000471309 FXYD4P59646 89 aa7.83□□□□□ -1.16
VPS52-216ENST00000471309 SUPT4H1P63272 117 aaKnown RBP7.83□□□□□ -1.16
VPS52-216ENST00000471309 CR1LQ2VPA4 569 aa7.83□□□□□ -1.16
VPS52-216ENST00000471309 ABCA11PQ4W5N1 156 aa7.83□□□□□ -1.16
VPS52-216ENST00000471309 FAM201AQ5SY85 155 aa7.83□□□□□ -1.16
VPS52-216ENST00000471309 C11orf71Q6IPW1 123 aa7.83□□□□□ -1.16
VPS52-216ENST00000471309 C11orf88Q6PI97 169 aa7.83□□□□□ -1.16
VPS52-216ENST00000471309 ZNF788Q6ZQV5 615 aa7.83□□□□□ -1.16
VPS52-216ENST00000471309 TGIF2LYQ8IUE0 185 aa7.83□□□□□ -1.16
VPS52-216ENST00000471309 FAM185AQ8N0U4 392 aa7.83□□□□□ -1.16
VPS52-216ENST00000471309 OR5D13Q8NGL4 314 aa7.83□□□□□ -1.16
VPS52-216ENST00000471309 LURAP1Q96LR2 239 aa7.83□□□□□ -1.16
VPS52-216ENST00000471309 GAFA1Q96PS6 74 aa7.83□□□□□ -1.16
VPS52-216ENST00000471309 OR2A7Q96R45 310 aa7.83□□□□□ -1.16
VPS52-216ENST00000471309 ZNF665Q9H7R5 613 aa7.83□□□□□ -1.16
VPS52-216ENST00000471309 SLC2A9Q9NRM0 540 aa7.83□□□□□ -1.16
VPS52-216ENST00000471309 DCAF16Q9NXF7 216 aa7.83□□□□□ -1.16
VPS52-216ENST00000471309 MAB21L2Q9Y586 359 aa7.83□□□□□ -1.16
VPS52-216ENST00000471309 SMG1Q96Q15 3661 aaKnown RBP7.83□□□□□ -1.16
VPS52-216ENST00000471309 DYSFO75923 2080 aa7.82□□□□□ -1.16
VPS52-216ENST00000471309 PPIAL4EA0A075B759 164 aa7.82□□□□□ -1.16
VPS52-216ENST00000471309 TRAV39A0A0B4J263 110 aa7.82□□□□□ -1.16
VPS52-216ENST00000471309 DBX1A6NMT0 343 aa7.82□□□□□ -1.16
VPS52-216ENST00000471309 PPIAL4DF5H284 164 aa7.82□□□□□ -1.16
VPS52-216ENST00000471309 MAST4O15021 2626 aa7.82□□□□□ -1.16
VPS52-216ENST00000471309 SIGLEC5O15389 551 aa7.82□□□□□ -1.16
VPS52-216ENST00000471309 SLC22A5O76082 557 aa7.82□□□□□ -1.16
VPS52-216ENST00000471309 FSTL3O95633 263 aa7.82□□□□□ -1.16
VPS52-216ENST00000471309 PPIAL4FP0DN26 164 aa7.82□□□□□ -1.16
VPS52-216ENST00000471309 GZMKP49863 264 aa7.82□□□□□ -1.16
VPS52-216ENST00000471309 PIGPP57054 158 aa7.82□□□□□ -1.16
VPS52-216ENST00000471309 RAP2BP61225 183 aa7.82□□□□□ -1.16
VPS52-216ENST00000471309 RND3P61587 244 aa7.82□□□□□ -1.16
VPS52-216ENST00000471309 EDDM3AQ14507 147 aa7.82□□□□□ -1.16
VPS52-216ENST00000471309 CLEC18BQ6UXF7 455 aa7.82□□□□□ -1.16
VPS52-216ENST00000471309 NLRC3Q7RTR2 1065 aa7.82□□□□□ -1.16
VPS52-216ENST00000471309 C5orf24Q7Z6I8 188 aa7.82□□□□□ -1.16
VPS52-216ENST00000471309 NOXA1Q86UR1 476 aa7.82□□□□□ -1.16
VPS52-216ENST00000471309 DTX2Q86UW9 622 aa7.82□□□□□ -1.16
VPS52-216ENST00000471309 SGPP2Q8IWX5 399 aa7.82□□□□□ -1.16
VPS52-216ENST00000471309 ZNF565Q8N9K5 539 aa7.82□□□□□ -1.16
VPS52-216ENST00000471309 CCDC71LQ8N9Z2 235 aa7.82□□□□□ -1.16
VPS52-216ENST00000471309 ZNRF1Q8ND25 227 aa7.82□□□□□ -1.16
VPS52-216ENST00000471309 OR5M8Q8NGP6 311 aa7.82□□□□□ -1.16
VPS52-216ENST00000471309 OR13A1Q8NGR1 328 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms