RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 ANOS1P23352 680 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 OR52M1Q8NGK5 317 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 OR10AC1Q8NH08 325 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 TEX101Q9BY14 249 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 SAP30LQ9HAJ7 183 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 MIOXQ9UGB7 285 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 KCNE3Q9Y6H6 103 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 H0YIG0 161 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 TDGF1P13385 188 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 JMJD6Q6NYC1 403 aaPredicted RBP6.09□□□□□ -1.43
BRCA1-210ENST00000471181 MUC20Q8N307 709 aaPredicted RBP6.09□□□□□ -1.43
BRCA1-210ENST00000471181 LHFPL5Q8TAF8 219 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 PRSS27Q9BQR3 290 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 CYSLTR2Q9NS75 346 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 HSPB7Q9UBY9 170 aa6.09□□□□□ -1.43
BRCA1-210ENST00000471181 A0A087WUJ7 227 aa6.09□□□□□ -1.44
BRCA1-210ENST00000471181 WNT9BO14905 357 aa6.09□□□□□ -1.44
BRCA1-210ENST00000471181 CHST1O43916 411 aa6.09□□□□□ -1.44
BRCA1-210ENST00000471181 SOD3P08294 240 aa6.09□□□□□ -1.44
BRCA1-210ENST00000471181 FMODQ06828 376 aa6.09□□□□□ -1.44
BRCA1-210ENST00000471181 FAM27D1Q5T7N8 215 aa6.09□□□□□ -1.44
BRCA1-210ENST00000471181 CBLN2Q8IUK8 224 aa6.09□□□□□ -1.44
BRCA1-210ENST00000471181 OR10S1Q8NGN2 331 aa6.09□□□□□ -1.44
BRCA1-210ENST00000471181 OR10D3Q8NH80 312 aa6.09□□□□□ -1.44
BRCA1-210ENST00000471181 SLC25A40Q8TBP6 338 aa6.09□□□□□ -1.44
BRCA1-210ENST00000471181 RND1Q92730 232 aa6.09□□□□□ -1.44
BRCA1-210ENST00000471181 HILPDAQ9Y5L2 63 aa6.09□□□□□ -1.44
BRCA1-210ENST00000471181 METTL12A8MUP2 240 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 TARM1B6A8C7 271 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 SLC25A20O43772 301 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 MOSPD3O75425 235 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 ERGP11308 486 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 MFAP2P55001 183 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 GGTLC2Q14390 218 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 ANKRD33Q7Z3H0 272 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 SLC35E3Q7Z769 313 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 DEFB124Q8NES8 71 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 FAM216AQ8WUB2 273 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 RHOVQ96L33 236 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 FGF22Q9HCT0 170 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 MTCH2Q9Y6C9 303 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 TSPAN2O60636 221 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 ADAP1O75689 374 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 EML2O95834 649 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 MALP21145 153 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 SPEM2Q0P670 501 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 ST3GAL2Q16842 350 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 SNAI3Q3KNW1 292 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 ASCL5Q7RTU5 278 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 MRPL30Q8TCC3 161 aaKnown RBP6.08□□□□□ -1.44
BRCA1-210ENST00000471181 ALX4Q9H161 411 aaPredicted RBP6.08□□□□□ -1.44
BRCA1-210ENST00000471181 MPC2O95563 127 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 IGHV4-39P01824 125 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 PATE4P0C8F1 98 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 GFERP55789 205 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 PYCR3Q53H96 274 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 TMEM170BQ5T4T1 132 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 LAMTOR1Q6IAA8 161 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 OR5AN1Q8NGI8 311 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 SMIM4Q8WVI0 70 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 PRNDQ9UKY0 176 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 IGKV3D-20A0A0C4DH25 116 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 HOXA3O43365 443 aaPredicted RBP6.08□□□□□ -1.44
BRCA1-210ENST00000471181 FCMRO60667 390 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 NDUFB6O95139 128 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 ZNF32P17041 273 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 P2RY1P47900 373 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 CKS1BP61024 79 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 ISL1P61371 349 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 C10orf128Q5T292 105 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 Q6ZSR9 355 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 OR4D5Q8NGN0 318 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 TEX37Q96LM6 180 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 RBKSQ9H477 322 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 SMOC1Q9H4F8 434 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 TMEM56-RWDD3S4R434 201 aa6.08□□□□□ -1.44
BRCA1-210ENST00000471181 ZAR1LA6NP61 321 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 TRDCB7Z8K6 153 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 H3BQ15 152 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 SAA1P0DJI8 122 aaPredicted RBP6.07□□□□□ -1.44
BRCA1-210ENST00000471181 PCP4P48539 62 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 SELENOPP49908 381 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 DHRS2Q13268 280 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 C12orf54Q6X4T0 127 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 PTOV1Q86YD1 416 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 DNASE2BQ8WZ79 361 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 TMEM160Q9NX00 188 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 A0A1W2PS18 150 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 OTOSQ8NHW6 89 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 NUBPLQ8TB37 319 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 DCTN5Q9BTE1 182 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 TMEM70Q9BUB7 260 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 C20orf27Q9GZN8 174 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 PARLQ9H300 379 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 HS3ST2Q9Y278 367 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 DOT1LQ8TEK3 1739 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 TRAV1-2A0A0B4J238 106 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 UPK1AO00322 258 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 HYPMO75409 117 aa6.07□□□□□ -1.44
BRCA1-210ENST00000471181 GPX1P07203 203 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms