RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 SERPINA5P05154 406 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 CRHP06850 196 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 HCKP08631 526 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 H2BFMP0C1H6 154 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 LYNX1P0DP58 116 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 CALCBP10092 127 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 ZNF35P13682 527 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 CBR1P16152 277 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 TGFBR2P37173 567 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 ALDH3B1P43353 468 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 HSPA13P48723 471 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 FABP6P51161 128 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 CAV3P56539 151 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 RPS11P62280 158 aaKnown RBP eCLIP3.04□□□□□ -1.92
COL9A1-206ENST00000470652 LSM3P62310 102 aaKnown RBP3.04□□□□□ -1.92
COL9A1-206ENST00000470652 ZNF92Q03936 586 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 SNTB2Q13425 540 aaKnown RBP3.04□□□□□ -1.92
COL9A1-206ENST00000470652 MADCAM1Q13477 382 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 AQP6Q13520 282 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 RAB35Q15286 201 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 SLC25A35Q3KQZ1 300 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 FBXL19-AS1Q494R0 122 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 TIMM23BQ5SRD1 257 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 LINC00242Q5T6M2 205 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 LIPKQ5VXJ0 399 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 MEDAGQ5VYS4 303 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 OR2T2Q6IF00 324 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 DNM1P34Q6PK57 102 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 ZNF773Q6PK81 442 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 KRT77Q7Z794 578 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 ACBD7Q8N6N7 88 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 ZNF283Q8N7M2 679 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 NHLRC2Q8NBF2 726 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 C19orf18Q8NEA5 215 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 OR51A2Q8NGJ7 313 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 SLC25A40Q8TBP6 338 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 OR51E1Q8TCB6 317 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 TRUB1Q8WWH5 349 aaKnown RBP3.04□□□□□ -1.92
COL9A1-206ENST00000470652 RFT1Q96AA3 541 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 SGK3Q96BR1 496 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 ADAT3Q96EY9 351 aaPredicted RBP3.04□□□□□ -1.92
COL9A1-206ENST00000470652 ZNF799Q96GE5 643 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 TMEM80Q96HE8 168 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 SPACA5Q96QH8 159 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 DOK1Q99704 481 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 SLC30A2Q9BRI3 323 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 TMED9Q9BVK6 235 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 MRPL37Q9BZE1 423 aaKnown RBP3.04□□□□□ -1.92
COL9A1-206ENST00000470652 OR2J1Q9GZK6 312 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 YIPF3Q9GZM5 350 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 NDEL1Q9GZM8 345 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 PBOV1Q9GZY1 135 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 OR51E2Q9H255 320 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 TPK1Q9H3S4 243 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 C1orf198Q9H425 327 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 NIPAL2Q9H841 368 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 ACOT13Q9NPJ3 140 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 GPR84Q9NQS5 396 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 C8orf4Q9NR00 106 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 TNFRSF19Q9NS68 423 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 DIMT1Q9UNQ2 313 aaKnown RBP3.04□□□□□ -1.92
COL9A1-206ENST00000470652 RPL36Q9Y3U8 105 aaKnown RBP3.04□□□□□ -1.92
COL9A1-206ENST00000470652 ETV7Q9Y603 341 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 CACNG2Q9Y698 323 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 ITPR2Q14571 2701 aa3.04□□□□□ -1.92
COL9A1-206ENST00000470652 TRAV8-7A0A075B6U6 113 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 TEX48A0A1B0GUV7 120 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 TMEM269A0A1B0GVZ9 245 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 LOC107986453A0A1B0GWG9 222 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 TMEM129A0AVI4 362 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 EFCAB10A6NFE3 127 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 OOEPA6NGQ2 149 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 METTL15A6NJ78 407 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 ZSCAN5BA6NJL1 495 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 CENPBD1B2RD01 187 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 ZNF878C9JN71 531 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 LOC110117498-PIK3R3F6TDL0 507 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 MYL12BO14950 172 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 ST8SIA3O43173 380 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 MPZL2O60487 215 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 GPX5O75715 221 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 FARS2O95363 451 aaKnown RBP3.03□□□□□ -1.92
COL9A1-206ENST00000470652 KRT8P05787 483 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 SOD3P08294 240 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 CCDC159P0C7I6 412 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 PIPP12273 146 aaPredicted RBP3.03□□□□□ -1.92
COL9A1-206ENST00000470652 CELP19835 753 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 NPR2P20594 1047 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 GADD45AP24522 165 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 PSMB9P28065 219 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 HSD11B1P28845 292 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 FHITP49789 147 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 GDI2P50395 445 aaKnown RBP3.03□□□□□ -1.92
COL9A1-206ENST00000470652 SH3BGRP55822 239 aaPredicted RBP3.03□□□□□ -1.92
COL9A1-206ENST00000470652 OR10A3P58181 314 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 GMFBP60983 142 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 PPP1CBP62140 327 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 LSM6P62312 80 aaKnown RBP3.03□□□□□ -1.92
COL9A1-206ENST00000470652 FABP5Q01469 135 aa3.03□□□□□ -1.92
COL9A1-206ENST00000470652 SCRN3Q0VDG4 424 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms