RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 SARAFQ96BY9 339 aa6.82□□□□□ -1.32
SMC4-212ENST00000470240 WDYHV1Q96HA8 205 aa6.82□□□□□ -1.32
SMC4-212ENST00000470240 AKR1E2Q96JD6 320 aa6.82□□□□□ -1.32
SMC4-212ENST00000470240 TP53RKQ96S44 253 aa6.82□□□□□ -1.32
SMC4-212ENST00000470240 CABLES2Q9BTV7 478 aa6.82□□□□□ -1.32
SMC4-212ENST00000470240 LIME1Q9H400 295 aa6.82□□□□□ -1.32
SMC4-212ENST00000470240 SMDT1Q9H4I9 107 aa6.82□□□□□ -1.32
SMC4-212ENST00000470240 ZNF552Q9H707 407 aaPredicted RBP6.82□□□□□ -1.32
SMC4-212ENST00000470240 C19orf12Q9NSK7 152 aa6.82□□□□□ -1.32
SMC4-212ENST00000470240 LIN7CQ9NUP9 197 aaKnown RBP6.82□□□□□ -1.32
SMC4-212ENST00000470240 MTCH1Q9NZJ7 389 aa6.82□□□□□ -1.32
SMC4-212ENST00000470240 IL17BQ9UHF5 180 aa6.82□□□□□ -1.32
SMC4-212ENST00000470240 PRSS50Q9UI38 385 aa6.82□□□□□ -1.32
SMC4-212ENST00000470240 TRAPPC2LQ9UL33 140 aa6.82□□□□□ -1.32
SMC4-212ENST00000470240 KCNS2Q9ULS6 477 aa6.82□□□□□ -1.32
SMC4-212ENST00000470240 PRELID1Q9Y255 219 aa6.82□□□□□ -1.32
SMC4-212ENST00000470240 AMDHD2Q9Y303 409 aa6.82□□□□□ -1.32
SMC4-212ENST00000470240 OR2W1Q9Y3N9 320 aa6.82□□□□□ -1.32
SMC4-212ENST00000470240 REV3LO60673 3130 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 PCSK5Q92824 1860 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 CDH23Q9H251 3354 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 ARHGAP21Q5T5U3 1957 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 TRAV17A0A0B4J275 112 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 A0A1B0GU03 582 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 NKX2-6A6NCS4 301 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 FAM74A7A6NL05 159 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 PRR33A8MZF0 331 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 ATP6V1G2-DDX39BF2Z307 99 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 HS3ST1O14792 307 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 NUPL2O15504 423 aaKnown RBP6.81□□□□□ -1.32
SMC4-212ENST00000470240 ADAM20O43506 726 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 SYNGR1O43759 233 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 SSSCA1O60232 199 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 TUSC2O75896 110 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 NXPH2O95156 264 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 NGFP01138 241 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 IFNA5P01569 189 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 SCTP09683 121 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 RAC2P15153 192 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 CTRB1P17538 263 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 CA6P23280 308 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 CD80P33681 288 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 KCNJ3P48549 501 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 EWSR1Q01844 656 aaKnown RBP eCLIP6.81□□□□□ -1.32
SMC4-212ENST00000470240 C3AR1Q16581 482 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 FAM74A3Q4VXF1 159 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 HIKESHIQ53FT3 197 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 AKR1C8PQ5T2L2 129 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 CTRB2Q6GPI1 263 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 DHRS7BQ6IAN0 325 aaPredicted RBP6.81□□□□□ -1.32
SMC4-212ENST00000470240 DPPA3Q6W0C5 159 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 LDLRAD3Q86YD5 345 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 C1orf174Q8IYL3 243 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 SELENOHQ8IZQ5 122 aaKnown RBP6.81□□□□□ -1.32
SMC4-212ENST00000470240 PUSL1Q8N0Z8 303 aaKnown RBP6.81□□□□□ -1.32
SMC4-212ENST00000470240 HSD17B11Q8NBQ5 300 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 C1orf162Q8NEQ5 155 aaPredicted RBP6.81□□□□□ -1.32
SMC4-212ENST00000470240 OR10V1Q8NGI7 309 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 OR52M1Q8NGK5 317 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 RDH5Q92781 318 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 BOD1Q96IK1 185 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 RAB40CQ96S21 281 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 ADAT1Q9BUB4 502 aaKnown RBP6.81□□□□□ -1.32
SMC4-212ENST00000470240 EIF5A2Q9GZV4 153 aaKnown RBP6.81□□□□□ -1.32
SMC4-212ENST00000470240 OR51B6Q9H340 312 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 OR51I2Q9H344 312 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 TMEM231Q9H6L2 316 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 ZDHHC11Q9H8X9 412 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 KCNJ16Q9NPI9 418 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 SMCO4Q9NRQ5 59 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 LYRM2Q9NU23 88 aaPredicted RBP6.81□□□□□ -1.32
SMC4-212ENST00000470240 ZNF581Q9P0T4 197 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 PRELID3BQ9Y3B1 194 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 TECTAO75443 2155 aa6.81□□□□□ -1.32
SMC4-212ENST00000470240 CLEC18AA5D8T8 446 aa6.8□□□□□ -1.32
SMC4-212ENST00000470240 IQCF6A8MYZ5 107 aa6.8□□□□□ -1.32
SMC4-212ENST00000470240 H3BS24 57 aa6.8□□□□□ -1.32
SMC4-212ENST00000470240 AGPAT2O15120 278 aa6.8□□□□□ -1.32
SMC4-212ENST00000470240 SMPD2O60906 423 aa6.8□□□□□ -1.32
SMC4-212ENST00000470240 ZNF205O95201 554 aa6.8□□□□□ -1.32
SMC4-212ENST00000470240 IL18BPO95998 194 aa6.8□□□□□ -1.32
SMC4-212ENST00000470240 HEXAP06865 529 aa6.8□□□□□ -1.32
SMC4-212ENST00000470240 RNASE1P07998 156 aaKnown RBP6.8□□□□□ -1.32
SMC4-212ENST00000470240 WNT2P09544 360 aa6.8□□□□□ -1.32
SMC4-212ENST00000470240 GLI4P10075 376 aa6.8□□□□□ -1.32
SMC4-212ENST00000470240 F2RP25116 425 aa6.8□□□□□ -1.32
SMC4-212ENST00000470240 EIF2S3P41091 472 aaKnown RBP6.8□□□□□ -1.32
SMC4-212ENST00000470240 WNT5AP41221 380 aa6.8□□□□□ -1.32
SMC4-212ENST00000470240 PPT1P50897 306 aa6.8□□□□□ -1.32
SMC4-212ENST00000470240 HBG1P69891 147 aa6.8□□□□□ -1.32
SMC4-212ENST00000470240 HBG2P69892 147 aa6.8□□□□□ -1.32
SMC4-212ENST00000470240 TLE4Q04727 773 aa6.8□□□□□ -1.32
SMC4-212ENST00000470240 TSC22D1Q15714 1073 aa6.8□□□□□ -1.32
SMC4-212ENST00000470240 MST1LQ2TV78 715 aa6.8□□□□□ -1.32
SMC4-212ENST00000470240 MIDNQ504T8 468 aa6.8□□□□□ -1.32
SMC4-212ENST00000470240 SMUG1Q53HV7 270 aa6.8□□□□□ -1.32
SMC4-212ENST00000470240 OR2T2Q6IF00 324 aa6.8□□□□□ -1.32
SMC4-212ENST00000470240 ATRAIDQ6UW56 229 aa6.8□□□□□ -1.32
SMC4-212ENST00000470240 ZNF818PQ6ZRF7 136 aa6.8□□□□□ -1.32
SMC4-212ENST00000470240 C22orf34Q6ZV56 151 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms