RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 OLIG3Q7RTU3 272 aa1.93□□□□□ -2.1
BRCA2-202ENST00000470094 FAM19A3Q7Z5A8 133 aa1.93□□□□□ -2.1
BRCA2-202ENST00000470094 MTERF4Q7Z6M4 381 aaKnown RBP1.93□□□□□ -2.1
BRCA2-202ENST00000470094 C2orf73Q8N5S3 287 aaPredicted RBP1.93□□□□□ -2.1
BRCA2-202ENST00000470094 TMEM251Q8N6I4 163 aa1.93□□□□□ -2.1
BRCA2-202ENST00000470094 OR8S1Q8NH09 359 aa1.93□□□□□ -2.1
BRCA2-202ENST00000470094 STOML3Q8TAV4 291 aa1.93□□□□□ -2.1
BRCA2-202ENST00000470094 DTD1Q8TEA8 209 aa1.93□□□□□ -2.1
BRCA2-202ENST00000470094 RNF133Q8WVZ7 376 aa1.93□□□□□ -2.1
BRCA2-202ENST00000470094 YIPF5Q969M3 257 aa1.93□□□□□ -2.1
BRCA2-202ENST00000470094 ULBP1Q9BZM6 244 aa1.93□□□□□ -2.1
BRCA2-202ENST00000470094 LRRC19Q9H756 370 aa1.93□□□□□ -2.1
BRCA2-202ENST00000470094 INIPQ9NRY2 104 aa1.93□□□□□ -2.1
BRCA2-202ENST00000470094 SPANXB1Q9NS25 103 aaPredicted RBP1.93□□□□□ -2.1
BRCA2-202ENST00000470094 MTCH2Q9Y6C9 303 aa1.93□□□□□ -2.1
BRCA2-202ENST00000470094 SETD1AO15047 1707 aaKnown RBP1.93□□□□□ -2.1
BRCA2-202ENST00000470094 SCN1AP35498 2009 aa1.93□□□□□ -2.1
BRCA2-202ENST00000470094 NOS1P29475 1434 aa1.92□□□□□ -2.1
BRCA2-202ENST00000470094 RIMS2Q9UQ26 1411 aa1.92□□□□□ -2.1
BRCA2-202ENST00000470094 UNC13AQ9UPW8 1703 aa1.92□□□□□ -2.1
BRCA2-202ENST00000470094 IGLL5B9A064 214 aa1.92□□□□□ -2.1
BRCA2-202ENST00000470094 F5H5P2 479 aa1.92□□□□□ -2.1
BRCA2-202ENST00000470094 KCNK2O95069 426 aa1.92□□□□□ -2.1
BRCA2-202ENST00000470094 SOX14O95416 240 aa1.92□□□□□ -2.1
BRCA2-202ENST00000470094 ATP6V1G2O95670 118 aa1.92□□□□□ -2.1
BRCA2-202ENST00000470094 ASS1P00966 412 aaKnown RBP1.92□□□□□ -2.1
BRCA2-202ENST00000470094 IGLV7-43P04211 117 aa1.92□□□□□ -2.1
BRCA2-202ENST00000470094 SERPINA6P08185 405 aa1.92□□□□□ -2.1
BRCA2-202ENST00000470094 GRPRP30550 384 aa1.92□□□□□ -2.1
BRCA2-202ENST00000470094 RCVRNP35243 200 aa1.92□□□□□ -2.1
BRCA2-202ENST00000470094 ACTR1BP42025 376 aa1.92□□□□□ -2.1
BRCA2-202ENST00000470094 HAAOP46952 286 aa1.92□□□□□ -2.1
BRCA2-202ENST00000470094 GDI2P50395 445 aaKnown RBP1.92□□□□□ -2.1
BRCA2-202ENST00000470094 BLVRAP53004 296 aa1.92□□□□□ -2.1
BRCA2-202ENST00000470094 GTF2BQ00403 316 aa1.92□□□□□ -2.1
BRCA2-202ENST00000470094 FADDQ13158 208 aa1.92□□□□□ -2.1
BRCA2-202ENST00000470094 ENDOGQ14249 297 aaKnown RBP1.92□□□□□ -2.1
BRCA2-202ENST00000470094 PAFAH1B3Q15102 231 aaKnown RBP1.92□□□□□ -2.1
BRCA2-202ENST00000470094 C4orf26Q17RF5 130 aa1.92□□□□□ -2.1
BRCA2-202ENST00000470094 CLEC12BQ2HXU8 276 aa1.92□□□□□ -2.1
BRCA2-202ENST00000470094 C8orf74Q6P047 294 aa1.92□□□□□ -2.1
BRCA2-202ENST00000470094 SPINT4Q6UDR6 99 aa1.92□□□□□ -2.1
BRCA2-202ENST00000470094 PAGE2Q7Z2X7 111 aa1.92□□□□□ -2.1
BRCA2-202ENST00000470094 LINC00304Q8N9R0 145 aa1.92□□□□□ -2.1
BRCA2-202ENST00000470094 OR52E4Q8NGH9 312 aa1.92□□□□□ -2.1
BRCA2-202ENST00000470094 OR11L1Q8NGX0 322 aa1.92□□□□□ -2.1
BRCA2-202ENST00000470094 CMTM5Q96DZ9 223 aa1.92□□□□□ -2.1
BRCA2-202ENST00000470094 SMIM12Q96EX1 92 aa1.92□□□□□ -2.1
BRCA2-202ENST00000470094 RBP7Q96R05 134 aa1.92□□□□□ -2.1
BRCA2-202ENST00000470094 PARD6GQ9BYG4 376 aaPredicted RBP1.92□□□□□ -2.1
BRCA2-202ENST00000470094 CHST5Q9GZS9 411 aa1.92□□□□□ -2.1
BRCA2-202ENST00000470094 TXNIPQ9H3M7 391 aa1.92□□□□□ -2.1
BRCA2-202ENST00000470094 BTRCQ9Y297 605 aa1.92□□□□□ -2.1
BRCA2-202ENST00000470094 RAB3GAP2Q9H2M9 1393 aa1.92□□□□□ -2.1
BRCA2-202ENST00000470094 CCRL2O00421 344 aa1.91□□□□□ -2.1
BRCA2-202ENST00000470094 SLC16A4O15374 487 aa1.91□□□□□ -2.1
BRCA2-202ENST00000470094 POP7O75817 140 aaKnown RBP1.91□□□□□ -2.1
BRCA2-202ENST00000470094 DEXIO95424 95 aa1.91□□□□□ -2.1
BRCA2-202ENST00000470094 FSTL3O95633 263 aa1.91□□□□□ -2.1
BRCA2-202ENST00000470094 COX5BP10606 129 aa1.91□□□□□ -2.1
BRCA2-202ENST00000470094 PTHLHP12272 177 aa1.91□□□□□ -2.1
BRCA2-202ENST00000470094 CLDN12P56749 244 aa1.91□□□□□ -2.1
BRCA2-202ENST00000470094 RAB2AP61019 212 aa1.91□□□□□ -2.1
BRCA2-202ENST00000470094 IMPG1Q17R60 797 aa1.91□□□□□ -2.1
BRCA2-202ENST00000470094 DNAL1Q4LDG9 190 aa1.91□□□□□ -2.1
BRCA2-202ENST00000470094 CENPWQ5EE01 88 aa1.91□□□□□ -2.1
BRCA2-202ENST00000470094 KRTAP5-7Q6L8G8 165 aa1.91□□□□□ -2.1
BRCA2-202ENST00000470094 TTC33Q6PID6 262 aaPredicted RBP1.91□□□□□ -2.1
BRCA2-202ENST00000470094 DNM1P34Q6PK57 102 aa1.91□□□□□ -2.1
BRCA2-202ENST00000470094 FAM19A5Q7Z5A7 132 aaPredicted RBP1.91□□□□□ -2.1
BRCA2-202ENST00000470094 AMN1Q8IY45 258 aa1.91□□□□□ -2.1
BRCA2-202ENST00000470094 ZFP82Q8N141 532 aa1.91□□□□□ -2.1
BRCA2-202ENST00000470094 RIBC1Q8N443 379 aaPredicted RBP1.91□□□□□ -2.1
BRCA2-202ENST00000470094 OR4C13Q8NGP0 309 aa1.91□□□□□ -2.1
BRCA2-202ENST00000470094 RBPMSQ93062 196 aaKnown RBP1.91□□□□□ -2.1
BRCA2-202ENST00000470094 SMIM19Q96E16 107 aa1.91□□□□□ -2.1
BRCA2-202ENST00000470094 REEP6Q96HR9 211 aa1.91□□□□□ -2.1
BRCA2-202ENST00000470094 SEC22CQ9BRL7 303 aa1.91□□□□□ -2.1
BRCA2-202ENST00000470094 NSRP1Q9H0G5 558 aaKnown RBP1.91□□□□□ -2.1
BRCA2-202ENST00000470094 DHCR7Q9UBM7 475 aaKnown RBP1.91□□□□□ -2.1
BRCA2-202ENST00000470094 TP53TG1Q9Y2A0 90 aa1.91□□□□□ -2.1
BRCA2-202ENST00000470094 IGKV3D-11A0A0A0MRZ8 115 aa1.9□□□□□ -2.11
BRCA2-202ENST00000470094 DAPL1A0PJW8 107 aa1.9□□□□□ -2.11
BRCA2-202ENST00000470094 TMEM210A6NLX4 147 aa1.9□□□□□ -2.11
BRCA2-202ENST00000470094 LEUTXA8MZ59 168 aa1.9□□□□□ -2.11
BRCA2-202ENST00000470094 K7ERS5 55 aa1.9□□□□□ -2.11
BRCA2-202ENST00000470094 PSMG1O95456 288 aa1.9□□□□□ -2.11
BRCA2-202ENST00000470094 TGFBR2P37173 567 aa1.9□□□□□ -2.11
BRCA2-202ENST00000470094 HSPA13P48723 471 aa1.9□□□□□ -2.11
BRCA2-202ENST00000470094 RBX1P62877 108 aa1.9□□□□□ -2.11
BRCA2-202ENST00000470094 DYNLL1P63167 89 aaKnown RBP1.9□□□□□ -2.11
BRCA2-202ENST00000470094 SKP2Q13309 424 aa1.9□□□□□ -2.11
BRCA2-202ENST00000470094 SAPCD1Q5SSQ6 148 aa1.9□□□□□ -2.11
BRCA2-202ENST00000470094 TMEM69Q5SWH9 247 aa1.9□□□□□ -2.11
BRCA2-202ENST00000470094 HENMT1Q5T8I9 393 aaKnown RBP1.9□□□□□ -2.11
BRCA2-202ENST00000470094 SPNS3Q6ZMD2 512 aa1.9□□□□□ -2.11
BRCA2-202ENST00000470094 Q8N402 240 aa1.9□□□□□ -2.11
BRCA2-202ENST00000470094 PYURFQ96I23 114 aa1.9□□□□□ -2.11
BRCA2-202ENST00000470094 SHANK2-AS3Q9BTD1 123 aa1.9□□□□□ -2.11
BRCA2-202ENST00000470094 PLA2G12AQ9BZM1 189 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms