RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 UNKLQ9H9P5 680 aaKnown RBP11.65□□□□□ -0.55
BRCA1-209ENST00000470026 OR2W1Q9Y3N9 320 aa11.65□□□□□ -0.55
BRCA1-209ENST00000470026 FREM1Q5H8C1 2179 aa11.65□□□□□ -0.55
BRCA1-209ENST00000470026 TRAV24A0A0B4J272 114 aa11.64□□□□□ -0.55
BRCA1-209ENST00000470026 A0A1B0GU03 582 aa11.64□□□□□ -0.55
BRCA1-209ENST00000470026 hCG_1809904A0A1W2PP81 198 aa11.64□□□□□ -0.55
BRCA1-209ENST00000470026 A0A1W2PPE2 198 aa11.64□□□□□ -0.55
BRCA1-209ENST00000470026 A0A1W2PR64 198 aa11.64□□□□□ -0.55
BRCA1-209ENST00000470026 A0A1W2PRV1 198 aa11.64□□□□□ -0.55
BRCA1-209ENST00000470026 CDRT15L2A8MXV6 281 aa11.64□□□□□ -0.55
BRCA1-209ENST00000470026 CHST1O43916 411 aa11.64□□□□□ -0.55
BRCA1-209ENST00000470026 CCNOP22674 350 aa11.64□□□□□ -0.55
BRCA1-209ENST00000470026 OMGP23515 440 aa11.64□□□□□ -0.55
BRCA1-209ENST00000470026 ZNF506Q5JVG8 444 aa11.64□□□□□ -0.55
BRCA1-209ENST00000470026 DBX2Q6ZNG2 339 aa11.64□□□□□ -0.55
BRCA1-209ENST00000470026 ZFP62Q8NB50 900 aaPredicted RBP11.64□□□□□ -0.55
BRCA1-209ENST00000470026 THOC3Q96J01 351 aaKnown RBP11.64□□□□□ -0.55
BRCA1-209ENST00000470026 ATP5SQ99766 215 aa11.64□□□□□ -0.55
BRCA1-209ENST00000470026 MPC1Q9Y5U8 109 aa11.64□□□□□ -0.55
BRCA1-209ENST00000470026 TRAV1-1A0A0B4J248 108 aa11.63□□□□□ -0.55
BRCA1-209ENST00000470026 A0A0G2JRQ6 117 aa11.63□□□□□ -0.55
BRCA1-209ENST00000470026 OR5B21A6NL26 309 aa11.63□□□□□ -0.55
BRCA1-209ENST00000470026 CST7O76096 145 aa11.63□□□□□ -0.55
BRCA1-209ENST00000470026 F10P00742 488 aa11.63□□□□□ -0.55
BRCA1-209ENST00000470026 HSPB1P04792 205 aaKnown RBP11.63□□□□□ -0.55
BRCA1-209ENST00000470026 ARG1P05089 322 aa11.63□□□□□ -0.55
BRCA1-209ENST00000470026 S100A6P06703 90 aa11.63□□□□□ -0.55
BRCA1-209ENST00000470026 TAS2R30P59541 319 aa11.63□□□□□ -0.55
BRCA1-209ENST00000470026 HLA-DRB3P79483 266 aa11.63□□□□□ -0.55
BRCA1-209ENST00000470026 C9orf135Q5VTT2 229 aa11.63□□□□□ -0.55
BRCA1-209ENST00000470026 MUCL1Q96DR8 90 aa11.63□□□□□ -0.55
BRCA1-209ENST00000470026 DDA1Q9BW61 102 aa11.63□□□□□ -0.55
BRCA1-209ENST00000470026 PKIBQ9C010 78 aa11.63□□□□□ -0.55
BRCA1-209ENST00000470026 CALHM2Q9HA72 323 aa11.63□□□□□ -0.55
BRCA1-209ENST00000470026 B4GALT7Q9UBV7 327 aa11.63□□□□□ -0.55
BRCA1-209ENST00000470026 A0A087WWC5 75 aa11.63□□□□□ -0.55
BRCA1-209ENST00000470026 SYNGR4O95473 234 aa11.63□□□□□ -0.55
BRCA1-209ENST00000470026 PDGFBP01127 241 aaPredicted RBP11.63□□□□□ -0.55
BRCA1-209ENST00000470026 ZXDAP98168 799 aa11.63□□□□□ -0.55
BRCA1-209ENST00000470026 SRYQ05066 204 aa11.63□□□□□ -0.55
BRCA1-209ENST00000470026 ICAM4Q14773 271 aa11.63□□□□□ -0.55
BRCA1-209ENST00000470026 HEPN1Q6WQI6 88 aa11.63□□□□□ -0.55
BRCA1-209ENST00000470026 ZNF573Q86YE8 665 aa11.63□□□□□ -0.55
BRCA1-209ENST00000470026 GPR146Q96CH1 333 aa11.63□□□□□ -0.55
BRCA1-209ENST00000470026 RBMXL1Q96E39 390 aaKnown RBP11.63□□□□□ -0.55
BRCA1-209ENST00000470026 CFAP54Q96N23 3096 aa11.63□□□□□ -0.55
BRCA1-209ENST00000470026 HIST1H2AAQ96QV6 131 aa11.63□□□□□ -0.55
BRCA1-209ENST00000470026 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.62□□□□□ -0.55
BRCA1-209ENST00000470026 TXNL1O43396 289 aa11.62□□□□□ -0.55
BRCA1-209ENST00000470026 DFFBO76075 338 aa11.62□□□□□ -0.55
BRCA1-209ENST00000470026 SCAF4O95104 1147 aaKnown RBP11.62□□□□□ -0.55
BRCA1-209ENST00000470026 ZNF14P17017 642 aaPredicted RBP11.62□□□□□ -0.55
BRCA1-209ENST00000470026 GNG3P63215 75 aa11.62□□□□□ -0.55
BRCA1-209ENST00000470026 RBMS3Q6XE24 437 aaKnown RBP11.62□□□□□ -0.55
BRCA1-209ENST00000470026 NEK7Q8TDX7 302 aa11.62□□□□□ -0.55
BRCA1-209ENST00000470026 APH1AQ96BI3 265 aa11.62□□□□□ -0.55
BRCA1-209ENST00000470026 TCEAL7Q9BRU2 100 aa11.62□□□□□ -0.55
BRCA1-209ENST00000470026 A0A1B0GV50 99 aa11.62□□□□□ -0.55
BRCA1-209ENST00000470026 H3BQ15 152 aa11.62□□□□□ -0.55
BRCA1-209ENST00000470026 HSPB6O14558 160 aa11.62□□□□□ -0.55
BRCA1-209ENST00000470026 DEGS1O15121 323 aa11.62□□□□□ -0.55
BRCA1-209ENST00000470026 ZNHIT1O43257 154 aa11.62□□□□□ -0.55
BRCA1-209ENST00000470026 LAMTOR5O43504 91 aa11.62□□□□□ -0.55
BRCA1-209ENST00000470026 HBE1P02100 147 aa11.62□□□□□ -0.55
BRCA1-209ENST00000470026 OR8U8P0C7N1 319 aa11.62□□□□□ -0.55
BRCA1-209ENST00000470026 WNT5AP41221 380 aa11.62□□□□□ -0.55
BRCA1-209ENST00000470026 RUNX1Q01196 453 aa11.62□□□□□ -0.55
BRCA1-209ENST00000470026 FABP9Q0Z7S8 132 aa11.62□□□□□ -0.55
BRCA1-209ENST00000470026 ZNF154Q13106 437 aa11.62□□□□□ -0.55
BRCA1-209ENST00000470026 HAGHQ16775 308 aa11.62□□□□□ -0.55
BRCA1-209ENST00000470026 OR10G4Q8NGN3 311 aa11.62□□□□□ -0.55
BRCA1-209ENST00000470026 CLDND2Q8NHS1 167 aa11.62□□□□□ -0.55
BRCA1-209ENST00000470026 LSM10Q969L4 123 aaKnown RBP11.62□□□□□ -0.55
BRCA1-209ENST00000470026 RAB40CQ96S21 281 aa11.62□□□□□ -0.55
BRCA1-209ENST00000470026 TTTY12Q9BZ98 90 aa11.62□□□□□ -0.55
BRCA1-209ENST00000470026 OR51I2Q9H344 312 aa11.62□□□□□ -0.55
BRCA1-209ENST00000470026 DLL3Q9NYJ7 618 aa11.62□□□□□ -0.55
BRCA1-209ENST00000470026 TREM2Q9NZC2 230 aa11.62□□□□□ -0.55
BRCA1-209ENST00000470026 PUS1Q9Y606 427 aaKnown RBP eCLIP11.62□□□□□ -0.55
BRCA1-209ENST00000470026 LRP5LA4QPB2 252 aa11.61□□□□□ -0.55
BRCA1-209ENST00000470026 ANKRD30BLA7E2S9 258 aa11.61□□□□□ -0.55
BRCA1-209ENST00000470026 LILRA1O75019 489 aa11.61□□□□□ -0.55
BRCA1-209ENST00000470026 OR2C1O95371 312 aa11.61□□□□□ -0.55
BRCA1-209ENST00000470026 IGLV2-14P01704 120 aa11.61□□□□□ -0.55
BRCA1-209ENST00000470026 S100GP29377 79 aa11.61□□□□□ -0.55
BRCA1-209ENST00000470026 AKR1C8PQ5T2L2 129 aa11.61□□□□□ -0.55
BRCA1-209ENST00000470026 Q6P435 159 aa11.61□□□□□ -0.55
BRCA1-209ENST00000470026 FAM58AQ8N1B3 248 aa11.61□□□□□ -0.55
BRCA1-209ENST00000470026 OR10J5Q8NHC4 309 aa11.61□□□□□ -0.55
BRCA1-209ENST00000470026 ZNF251Q9BRH9 671 aa11.61□□□□□ -0.55
BRCA1-209ENST00000470026 HES7Q9BYE0 225 aa11.61□□□□□ -0.55
BRCA1-209ENST00000470026 GP6Q9HCN6 339 aa11.61□□□□□ -0.55
BRCA1-209ENST00000470026 LIPGQ9Y5X9 500 aa11.61□□□□□ -0.55
BRCA1-209ENST00000470026 WSB1Q9Y6I7 421 aa11.61□□□□□ -0.55
BRCA1-209ENST00000470026 WDR87Q6ZQQ6 2873 aa11.61□□□□□ -0.55
BRCA1-209ENST00000470026 C9orf172C9J069 976 aa11.6□□□□□ -0.55
BRCA1-209ENST00000470026 AP4M1O00189 453 aa11.6□□□□□ -0.55
BRCA1-209ENST00000470026 WRBO00258 174 aa11.6□□□□□ -0.55
BRCA1-209ENST00000470026 MAGEA5P43359 124 aa11.6□□□□□ -0.55
BRCA1-209ENST00000470026 TLE4Q04727 773 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms