RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 ZNF442Q9H7R0 627 aa6.96□□□□□ -1.29
BRCA1-208ENST00000468300 FN3KRPQ9HA64 309 aa6.96□□□□□ -1.29
BRCA1-208ENST00000468300 DUSP13Q9UII6 198 aa6.96□□□□□ -1.29
BRCA1-208ENST00000468300 KMT2BQ9UMN6 2715 aaPredicted RBP6.96□□□□□ -1.29
BRCA1-208ENST00000468300 FAM240BA0A1B0GVZ2 78 aa6.96□□□□□ -1.3
BRCA1-208ENST00000468300 RFPL4AA6NLU0 287 aa6.96□□□□□ -1.3
BRCA1-208ENST00000468300 SERPINE3A8MV23 424 aa6.96□□□□□ -1.3
BRCA1-208ENST00000468300 DEFB108AA8MXU0 73 aa6.96□□□□□ -1.3
BRCA1-208ENST00000468300 E7EQL1 145 aa6.96□□□□□ -1.3
BRCA1-208ENST00000468300 RFPL4AL1F8VTS6 287 aa6.96□□□□□ -1.3
BRCA1-208ENST00000468300 H0Y8G0 127 aa6.96□□□□□ -1.3
BRCA1-208ENST00000468300 WNT9BO14905 357 aa6.96□□□□□ -1.3
BRCA1-208ENST00000468300 GRPP07492 148 aa6.96□□□□□ -1.3
BRCA1-208ENST00000468300 HLA-DMAP28067 261 aa6.96□□□□□ -1.3
BRCA1-208ENST00000468300 DUSP1P28562 367 aa6.96□□□□□ -1.3
BRCA1-208ENST00000468300 FHITP49789 147 aa6.96□□□□□ -1.3
BRCA1-208ENST00000468300 CEBPGP53567 150 aa6.96□□□□□ -1.3
BRCA1-208ENST00000468300 MICBQ29980 383 aa6.96□□□□□ -1.3
BRCA1-208ENST00000468300 OR2B11Q5JQS5 317 aa6.96□□□□□ -1.3
BRCA1-208ENST00000468300 SSX8Q7RTT4 187 aa6.96□□□□□ -1.3
BRCA1-208ENST00000468300 HOGA1Q86XE5 327 aa6.96□□□□□ -1.3
BRCA1-208ENST00000468300 POC1AQ8NBT0 407 aa6.96□□□□□ -1.3
BRCA1-208ENST00000468300 OR13G1Q8NGZ3 307 aa6.96□□□□□ -1.3
BRCA1-208ENST00000468300 DAZAP1Q96EP5 407 aaKnown RBP6.96□□□□□ -1.3
BRCA1-208ENST00000468300 WDR13Q9H1Z4 485 aa6.96□□□□□ -1.3
BRCA1-208ENST00000468300 COL6A6A6NMZ7 2263 aa6.96□□□□□ -1.3
BRCA1-208ENST00000468300 HIVEP3Q5T1R4 2406 aa6.96□□□□□ -1.3
BRCA1-208ENST00000468300 A0A1B0GUH1 482 aa6.96□□□□□ -1.3
BRCA1-208ENST00000468300 PDCD6O75340 191 aa6.96□□□□□ -1.3
BRCA1-208ENST00000468300 IGHV1-46P01743 117 aa6.96□□□□□ -1.3
BRCA1-208ENST00000468300 ARL3P36405 182 aa6.96□□□□□ -1.3
BRCA1-208ENST00000468300 INPP1P49441 399 aa6.96□□□□□ -1.3
BRCA1-208ENST00000468300 C5orf24Q7Z6I8 188 aa6.96□□□□□ -1.3
BRCA1-208ENST00000468300 TMEM17Q86X19 198 aa6.96□□□□□ -1.3
BRCA1-208ENST00000468300 TGIF2LYQ8IUE0 185 aa6.96□□□□□ -1.3
BRCA1-208ENST00000468300 FAM58AQ8N1B3 248 aa6.96□□□□□ -1.3
BRCA1-208ENST00000468300 OR2Z1Q8NG97 314 aa6.96□□□□□ -1.3
BRCA1-208ENST00000468300 OR13C8Q8NGS7 320 aa6.96□□□□□ -1.3
BRCA1-208ENST00000468300 PLPPR2Q96GM1 343 aa6.96□□□□□ -1.3
BRCA1-208ENST00000468300 TMEM204Q9BSN7 226 aa6.96□□□□□ -1.3
BRCA1-208ENST00000468300 RHOFQ9HBH0 211 aa6.96□□□□□ -1.3
BRCA1-208ENST00000468300 TAS2R8Q9NYW2 309 aa6.96□□□□□ -1.3
BRCA1-208ENST00000468300 TANC2Q9HCD6 1990 aa6.96□□□□□ -1.3
BRCA1-208ENST00000468300 VPS13CQ709C8 3753 aa6.96□□□□□ -1.3
BRCA1-208ENST00000468300 COL12A1Q99715 3063 aa6.96□□□□□ -1.3
BRCA1-208ENST00000468300 RAI1Q7Z5J4 1906 aaPredicted RBP6.95□□□□□ -1.3
BRCA1-208ENST00000468300 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.95□□□□□ -1.3
BRCA1-208ENST00000468300 NAP1L6A6NFF2 107 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 TRAPPC2LH3BP13 241 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 CCSO14618 274 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 NDUFB6O95139 128 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 LHBP01229 141 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 TFF1P04155 84 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 CTXN2P0C2S0 81 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 AKAIN1P0CW23 69 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 SMIM6P0DI80 62 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 EGR1P18146 543 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 SNU13P55769 128 aaKnown RBP6.95□□□□□ -1.3
BRCA1-208ENST00000468300 TAS2R19P59542 299 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 ZNF146Q15072 292 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 CDK10Q15131 360 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 OXLD1Q5BKU9 147 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 TMEM65Q6PI78 240 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 C20orf204Q6ZNR8 217 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 OR51S1Q8NGJ8 323 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 LIME1Q9H400 295 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 ESRP2Q9H6T0 727 aaKnown RBP6.95□□□□□ -1.3
BRCA1-208ENST00000468300 PLEKHJ1Q9NW61 149 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 TAAR3PQ9P1P4 343 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 SPTA1P02549 2419 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 TEX13DA0A0J9YY54 714 aaPredicted RBP6.95□□□□□ -1.3
BRCA1-208ENST00000468300 ZG16O60844 167 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 OR4A8P0C604 315 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 HRH1P35367 487 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 TATDN3Q17R31 274 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 NKAPLQ5M9Q1 402 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 BOD1L2Q8IYS8 172 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 C20orf85Q9H1P6 137 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 DPAGT1Q9H3H5 408 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 SLA2Q9H6Q3 261 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 SLC2A8Q9NY64 477 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 NUBP2Q9Y5Y2 271 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 UBR5O95071 2799 aaPredicted RBP6.95□□□□□ -1.3
BRCA1-208ENST00000468300 UBE2QL1A1L167 161 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 ZNF736B4DX44 427 aaPredicted RBP6.95□□□□□ -1.3
BRCA1-208ENST00000468300 C19orf84I3L1E1 186 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 SLC33A1O00400 549 aaPredicted RBP6.95□□□□□ -1.3
BRCA1-208ENST00000468300 SAP30O75446 220 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 NAPSAO96009 420 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 FCGR3AP08637 254 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 FUT3P21217 361 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 CFHR2P36980 270 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 CEACAM3P40198 252 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 GATA4P43694 442 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 RAB25P57735 213 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 GRK1Q15835 563 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 MPV17LQ2QL34 196 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 PLET1Q6UQ28 207 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 BPIFB2Q8N4F0 458 aa6.95□□□□□ -1.3
BRCA1-208ENST00000468300 ING3Q9NXR8 418 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms