RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 TFAP2CQ92754 450 aa13.59□□□□□ -0.23
TRIM56-203ENST00000467847 RAX2Q96IS3 184 aa13.59□□□□□ -0.23
TRIM56-203ENST00000467847 EAF1Q96JC9 268 aaPredicted RBP13.59□□□□□ -0.23
TRIM56-203ENST00000467847 Q96MT0 163 aa13.59□□□□□ -0.23
TRIM56-203ENST00000467847 JAM3Q9BX67 310 aa13.59□□□□□ -0.23
TRIM56-203ENST00000467847 TMEM30CPA0ZSE6 113 aa13.58□□□□□ -0.24
TRIM56-203ENST00000467847 H0YHG0 523 aa13.58□□□□□ -0.24
TRIM56-203ENST00000467847 CCL24O00175 119 aa13.58□□□□□ -0.24
TRIM56-203ENST00000467847 SDCBPO00560 298 aaPredicted RBP13.58□□□□□ -0.24
TRIM56-203ENST00000467847 MPZL2O60487 215 aa13.58□□□□□ -0.24
TRIM56-203ENST00000467847 RPLP1P05386 114 aaKnown RBP13.58□□□□□ -0.24
TRIM56-203ENST00000467847 GZMHP20718 246 aa13.58□□□□□ -0.24
TRIM56-203ENST00000467847 GPR12P47775 334 aa13.58□□□□□ -0.24
TRIM56-203ENST00000467847 GTF2A1P52655 376 aaPredicted RBP13.58□□□□□ -0.24
TRIM56-203ENST00000467847 RBM11P57052 281 aaKnown RBP13.58□□□□□ -0.24
TRIM56-203ENST00000467847 EBI3Q14213 229 aa13.58□□□□□ -0.24
TRIM56-203ENST00000467847 OR2T10Q8NGZ9 312 aa13.58□□□□□ -0.24
TRIM56-203ENST00000467847 RGP1Q92546 391 aaPredicted RBP13.58□□□□□ -0.24
TRIM56-203ENST00000467847 GON7Q9BXV9 100 aa13.58□□□□□ -0.24
TRIM56-203ENST00000467847 METTL9Q9H1A3 318 aa13.58□□□□□ -0.24
TRIM56-203ENST00000467847 IFT22Q9H7X7 185 aa13.58□□□□□ -0.24
TRIM56-203ENST00000467847 LIN7CQ9NUP9 197 aaKnown RBP13.58□□□□□ -0.24
TRIM56-203ENST00000467847 ING4Q9UNL4 249 aa13.58□□□□□ -0.24
TRIM56-203ENST00000467847 DYNC1I1O14576 645 aa13.57□□□□□ -0.24
TRIM56-203ENST00000467847 CSTBP04080 98 aaKnown RBP13.57□□□□□ -0.24
TRIM56-203ENST00000467847 CD2P06729 351 aa13.57□□□□□ -0.24
TRIM56-203ENST00000467847 GP2P55259 537 aaKnown RBP13.57□□□□□ -0.24
TRIM56-203ENST00000467847 PNLIPRP3Q17RR3 467 aa13.57□□□□□ -0.24
TRIM56-203ENST00000467847 NHLRC3Q5JS37 347 aa13.57□□□□□ -0.24
TRIM56-203ENST00000467847 Q8N6K4 173 aa13.57□□□□□ -0.24
TRIM56-203ENST00000467847 OR52I1Q8NGK6 324 aa13.57□□□□□ -0.24
TRIM56-203ENST00000467847 OR52N1Q8NH53 320 aa13.57□□□□□ -0.24
TRIM56-203ENST00000467847 RHOXF1Q8NHV9 184 aa13.57□□□□□ -0.24
TRIM56-203ENST00000467847 UBALD1Q8TB05 177 aa13.57□□□□□ -0.24
TRIM56-203ENST00000467847 GPR148Q8TDV2 347 aa13.57□□□□□ -0.24
TRIM56-203ENST00000467847 ARL11Q969Q4 196 aa13.57□□□□□ -0.24
TRIM56-203ENST00000467847 ABCG5Q9H222 651 aa13.57□□□□□ -0.24
TRIM56-203ENST00000467847 DCLRE1BQ9H816 532 aa13.57□□□□□ -0.24
TRIM56-203ENST00000467847 FAM53CQ9NYF3 392 aa13.57□□□□□ -0.24
TRIM56-203ENST00000467847 IL36GQ9NZH8 169 aa13.57□□□□□ -0.24
TRIM56-203ENST00000467847 H3BNX3 289 aa13.56□□□□□ -0.24
TRIM56-203ENST00000467847 C15orf65H3BRN8 121 aa13.56□□□□□ -0.24
TRIM56-203ENST00000467847 GEMIN2O14893 280 aaKnown RBP13.56□□□□□ -0.24
TRIM56-203ENST00000467847 RAMP3O60896 148 aa13.56□□□□□ -0.24
TRIM56-203ENST00000467847 IL3RAP26951 378 aa13.56□□□□□ -0.24
TRIM56-203ENST00000467847 LUMP51884 338 aaPredicted RBP13.56□□□□□ -0.24
TRIM56-203ENST00000467847 PPP3R1P63098 170 aa13.56□□□□□ -0.24
TRIM56-203ENST00000467847 GPR50Q13585 617 aa13.56□□□□□ -0.24
TRIM56-203ENST00000467847 DEFB136Q30KP8 78 aa13.56□□□□□ -0.24
TRIM56-203ENST00000467847 CXorf66Q5JRM2 361 aaPredicted RBP13.56□□□□□ -0.24
TRIM56-203ENST00000467847 DDI2Q5TDH0 399 aa13.56□□□□□ -0.24
TRIM56-203ENST00000467847 LCNL1Q6ZST4 164 aa13.56□□□□□ -0.24
TRIM56-203ENST00000467847 LINC00596Q86U02 117 aa13.56□□□□□ -0.24
TRIM56-203ENST00000467847 LINC00311Q8N616 119 aa13.56□□□□□ -0.24
TRIM56-203ENST00000467847 C8orf31Q8N9H6 132 aa13.56□□□□□ -0.24
TRIM56-203ENST00000467847 Q8N9W7 124 aa13.56□□□□□ -0.24
TRIM56-203ENST00000467847 OR52M1Q8NGK5 317 aa13.56□□□□□ -0.24
TRIM56-203ENST00000467847 OR8U1Q8NH10 309 aa13.56□□□□□ -0.24
TRIM56-203ENST00000467847 NEK7Q8TDX7 302 aa13.56□□□□□ -0.24
TRIM56-203ENST00000467847 CCDC107Q8WV48 283 aa13.56□□□□□ -0.24
TRIM56-203ENST00000467847 RTN4IP1Q8WWV3 396 aaPredicted RBP13.56□□□□□ -0.24
TRIM56-203ENST00000467847 TMEM106AQ96A25 262 aa13.56□□□□□ -0.24
TRIM56-203ENST00000467847 S100A13Q99584 98 aa13.56□□□□□ -0.24
TRIM56-203ENST00000467847 TMEM138Q9NPI0 162 aa13.56□□□□□ -0.24
TRIM56-203ENST00000467847 RPL36Q9Y3U8 105 aaKnown RBP13.56□□□□□ -0.24
TRIM56-203ENST00000467847 MOSP00540 346 aa13.55□□□□□ -0.24
TRIM56-203ENST00000467847 SERPINA2P20848 420 aa13.55□□□□□ -0.24
TRIM56-203ENST00000467847 ZNF93P35789 620 aaPredicted RBP13.55□□□□□ -0.24
TRIM56-203ENST00000467847 FOXE3Q13461 319 aa13.55□□□□□ -0.24
TRIM56-203ENST00000467847 KLHL22Q53GT1 634 aa13.55□□□□□ -0.24
TRIM56-203ENST00000467847 ATAD3CQ5T2N8 411 aa13.55□□□□□ -0.24
TRIM56-203ENST00000467847 OR5M8Q8NGP6 311 aa13.55□□□□□ -0.24
TRIM56-203ENST00000467847 RASL11BQ9BPW5 248 aa13.55□□□□□ -0.24
TRIM56-203ENST00000467847 PAK1IP1Q9NWT1 392 aaPredicted RBP13.55□□□□□ -0.24
TRIM56-203ENST00000467847 GFOD1Q9NXC2 390 aa13.55□□□□□ -0.24
TRIM56-203ENST00000467847 IGHV3-43A0A0B4J1X8 118 aa13.54□□□□□ -0.24
TRIM56-203ENST00000467847 RRP9O43818 475 aaKnown RBP13.54□□□□□ -0.24
TRIM56-203ENST00000467847 ORC5O43913 435 aa13.54□□□□□ -0.24
TRIM56-203ENST00000467847 NHLRC4P0CG21 123 aaPredicted RBP13.54□□□□□ -0.24
TRIM56-203ENST00000467847 LIMS3P0CW19 117 aa13.54□□□□□ -0.24
TRIM56-203ENST00000467847 LIMS4P0CW20 117 aa13.54□□□□□ -0.24
TRIM56-203ENST00000467847 IGHV3-43DP0DP04 118 aa13.54□□□□□ -0.24
TRIM56-203ENST00000467847 CD1BP29016 333 aa13.54□□□□□ -0.24
TRIM56-203ENST00000467847 KIR2DS1Q14954 304 aa13.54□□□□□ -0.24
TRIM56-203ENST00000467847 MPV17LQ2QL34 196 aa13.54□□□□□ -0.24
TRIM56-203ENST00000467847 XAF1Q6GPH4 301 aa13.54□□□□□ -0.24
TRIM56-203ENST00000467847 FAM53AQ6NSI3 398 aaPredicted RBP13.54□□□□□ -0.24
TRIM56-203ENST00000467847 ZFP1Q6P2D0 407 aa13.54□□□□□ -0.24
TRIM56-203ENST00000467847 RPL22L1Q6P5R6 122 aaKnown RBP13.54□□□□□ -0.24
TRIM56-203ENST00000467847 ZNF497Q6ZNH5 498 aa13.54□□□□□ -0.24
TRIM56-203ENST00000467847 TMEM104Q8NE00 496 aa13.54□□□□□ -0.24
TRIM56-203ENST00000467847 ST6GALNAC6Q969X2 333 aa13.54□□□□□ -0.24
TRIM56-203ENST00000467847 S1PR3Q99500 378 aa13.54□□□□□ -0.24
TRIM56-203ENST00000467847 PLSCR3Q9NRY6 295 aa13.54□□□□□ -0.24
TRIM56-203ENST00000467847 MRPS18AQ9NVS2 196 aaKnown RBP13.54□□□□□ -0.24
TRIM56-203ENST00000467847 LOC100130705A0A1B0GUX0 176 aa13.53□□□□□ -0.24
TRIM56-203ENST00000467847 AIPO00170 330 aa13.53□□□□□ -0.24
TRIM56-203ENST00000467847 MT-ND4P03905 459 aa13.53□□□□□ -0.24
TRIM56-203ENST00000467847 ELANEP08246 267 aa13.53□□□□□ -0.24
TRIM56-203ENST00000467847 BDKRB2P30411 391 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms