RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 ZNF79Q15937 498 aa5.05□□□□□ -1.6
CHMP3-206ENST00000466032 TAF9Q16594 264 aa5.05□□□□□ -1.6
CHMP3-206ENST00000466032 TMEM155Q4W5P6 130 aa5.05□□□□□ -1.6
CHMP3-206ENST00000466032 TMEM255AQ5JRV8 349 aa5.05□□□□□ -1.6
CHMP3-206ENST00000466032 PRAMEF6Q5VXH4 476 aa5.05□□□□□ -1.6
CHMP3-206ENST00000466032 SLC35E4Q6ICL7 350 aa5.05□□□□□ -1.6
CHMP3-206ENST00000466032 NRARPQ7Z6K4 114 aa5.05□□□□□ -1.6
CHMP3-206ENST00000466032 WDR86Q86TI4 376 aa5.05□□□□□ -1.6
CHMP3-206ENST00000466032 SNX29P2Q8IUI4 249 aa5.05□□□□□ -1.6
CHMP3-206ENST00000466032 SPICQ8N5J4 248 aa5.05□□□□□ -1.6
CHMP3-206ENST00000466032 GCSAMQ8N6F7 178 aa5.05□□□□□ -1.6
CHMP3-206ENST00000466032 ZNF565Q8N9K5 539 aa5.05□□□□□ -1.6
CHMP3-206ENST00000466032 TMEM229BQ8NBD8 167 aa5.05□□□□□ -1.6
CHMP3-206ENST00000466032 UXS1Q8NBZ7 420 aa5.05□□□□□ -1.6
CHMP3-206ENST00000466032 OR10K1Q8NGX5 313 aa5.05□□□□□ -1.6
CHMP3-206ENST00000466032 NEK7Q8TDX7 302 aa5.05□□□□□ -1.6
CHMP3-206ENST00000466032 SEH1LQ96EE3 360 aa5.05□□□□□ -1.6
CHMP3-206ENST00000466032 SDSLQ96GA7 329 aa5.05□□□□□ -1.6
CHMP3-206ENST00000466032 ARHGAP5-AS1Q96IT6 56 aa5.05□□□□□ -1.6
CHMP3-206ENST00000466032 SDHCQ99643 169 aaPredicted RBP5.05□□□□□ -1.6
CHMP3-206ENST00000466032 CCL19Q99731 98 aa5.05□□□□□ -1.6
CHMP3-206ENST00000466032 CMSS1Q9BQ75 279 aaKnown RBP5.05□□□□□ -1.6
CHMP3-206ENST00000466032 CACNG6Q9BXT2 260 aa5.05□□□□□ -1.6
CHMP3-206ENST00000466032 OR51M1Q9H341 326 aa5.05□□□□□ -1.6
CHMP3-206ENST00000466032 PLEKHF2Q9H8W4 249 aa5.05□□□□□ -1.6
CHMP3-206ENST00000466032 UBTD1Q9HAC8 227 aa5.05□□□□□ -1.6
CHMP3-206ENST00000466032 UFSP2Q9NUQ7 469 aa5.05□□□□□ -1.6
CHMP3-206ENST00000466032 RBFOX1Q9NWB1 397 aaKnown RBP5.05□□□□□ -1.6
CHMP3-206ENST00000466032 MIOXQ9UGB7 285 aa5.05□□□□□ -1.6
CHMP3-206ENST00000466032 SCP2D1Q9UJQ7 156 aa5.05□□□□□ -1.6
CHMP3-206ENST00000466032 LAMP3Q9UQV4 416 aa5.05□□□□□ -1.6
CHMP3-206ENST00000466032 MAB21L2Q9Y586 359 aa5.05□□□□□ -1.6
CHMP3-206ENST00000466032 PRR14LQ5THK1 2151 aa5.05□□□□□ -1.6
CHMP3-206ENST00000466032 UBR5O95071 2799 aaPredicted RBP5.04□□□□□ -1.6
CHMP3-206ENST00000466032 PIGBOS1A0A0B4J2F0 54 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 ANKRD20A5PA0PJZ0 165 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 TMEM30CPA0ZSE6 113 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 RFPL4AA6NLU0 287 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 ZNF729A6NN14 1252 aaPredicted RBP5.04□□□□□ -1.6
CHMP3-206ENST00000466032 ZNF736B4DX44 427 aaPredicted RBP5.04□□□□□ -1.6
CHMP3-206ENST00000466032 DISC1C4P0D8 188 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 RFPL4AL1F8VTS6 287 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 K7N7A8 449 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 SOCS1O15524 211 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 OR2H2O95918 312 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 CD8AP01732 235 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 SOD3P08294 240 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 FGF2P09038 288 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 AKAIN1P0CW23 69 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 PSG2P11465 335 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 DAOP14920 347 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 SPNP16150 400 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 RAB4AP20338 218 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 GZMHP20718 246 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 GDNFP39905 211 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 TSPAN5P62079 268 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 IL13RA1P78552 427 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 SRSF1Q07955 248 aaKnown RBP eCLIP5.04□□□□□ -1.6
CHMP3-206ENST00000466032 SNTB1Q13884 538 aaKnown RBP5.04□□□□□ -1.6
CHMP3-206ENST00000466032 GUCA2BQ16661 112 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 PIGYQ3MUY2 71 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 PAN3Q58A45 887 aaKnown RBP5.04□□□□□ -1.6
CHMP3-206ENST00000466032 LRRC10Q5BKY1 277 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 CD276Q5ZPR3 534 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 ZNF57Q68EA5 555 aaPredicted RBP5.04□□□□□ -1.6
CHMP3-206ENST00000466032 STUMQ69YW2 141 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 OR10K2Q6IF99 312 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 Q6P435 159 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 C11orf88Q6PI97 169 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 PLET1Q6UQ28 207 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 LCNL1Q6ZST4 164 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 NLRC3Q7RTR2 1065 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 COMMD7Q86VX2 200 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 HOGA1Q86XE5 327 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 LRRC75A-AS1Q8N1F1 130 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 GAPTQ8N292 157 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 ARRDC1Q8N5I2 433 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 SUMF2Q8NBJ7 301 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 DMBX1Q8NFW5 382 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 CCL17Q92583 94 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 NEUROG1Q92886 237 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 NINJ1Q92982 152 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 DVL3Q92997 716 aaPredicted RBP5.04□□□□□ -1.6
CHMP3-206ENST00000466032 RAB39BQ96DA2 213 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 PRRT1Q99946 306 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 DPCDQ9BVM2 203 aaPredicted RBP5.04□□□□□ -1.6
CHMP3-206ENST00000466032 TMPRSS13Q9BYE2 586 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 ZNF436Q9C0F3 470 aaPredicted RBP5.04□□□□□ -1.6
CHMP3-206ENST00000466032 HEXA-AS1Q9H8Q6 139 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 ZNF286AQ9HBT8 521 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 RANGRFQ9HD47 186 aaPredicted RBP5.04□□□□□ -1.6
CHMP3-206ENST00000466032 PLSCR3Q9NRY6 295 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 BEX4Q9NWD9 120 aaPredicted RBP5.04□□□□□ -1.6
CHMP3-206ENST00000466032 KCNIP1Q9NZI2 227 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 OR6C3Q9NZP0 311 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 ANAPC10Q9UM13 185 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 CBY1Q9Y3M2 126 aa5.04□□□□□ -1.6
CHMP3-206ENST00000466032 TRBV23-1A0A0A0MS06 115 aa5.03□□□□□ -1.6
CHMP3-206ENST00000466032 A0A0A6YYD4 124 aa5.03□□□□□ -1.6
CHMP3-206ENST00000466032 A0A1W2PP11 408 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms