RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 ZNF880Q6PDB4 577 aa17.29■□□□□ 0.36
TUBGCP3-204ENST00000464139 BTNL8Q6UX41 500 aa17.29■□□□□ 0.36
TUBGCP3-204ENST00000464139 CMTM1Q8IZ96 169 aa17.29■□□□□ 0.36
TUBGCP3-204ENST00000464139 PLPPR1Q8TBJ4 325 aa17.29■□□□□ 0.36
TUBGCP3-204ENST00000464139 SVILO95425 2214 aa17.29■□□□□ 0.36
TUBGCP3-204ENST00000464139 FAM24AA6NFZ4 105 aa17.29■□□□□ 0.36
TUBGCP3-204ENST00000464139 NXPH3O95157 252 aa17.29■□□□□ 0.36
TUBGCP3-204ENST00000464139 MPV17P39210 176 aa17.29■□□□□ 0.36
TUBGCP3-204ENST00000464139 KIR2DL2P43627 348 aaPredicted RBP17.29■□□□□ 0.36
TUBGCP3-204ENST00000464139 CAV2P51636 162 aa17.29■□□□□ 0.36
TUBGCP3-204ENST00000464139 DEFB109BQ30KR1 87 aa17.29■□□□□ 0.36
TUBGCP3-204ENST00000464139 ARV1Q9H2C2 271 aa17.29■□□□□ 0.36
TUBGCP3-204ENST00000464139 OR2W1Q9Y3N9 320 aa17.29■□□□□ 0.36
TUBGCP3-204ENST00000464139 SLC33A1O00400 549 aaPredicted RBP17.28■□□□□ 0.36
TUBGCP3-204ENST00000464139 UCP1P25874 307 aa17.28■□□□□ 0.36
TUBGCP3-204ENST00000464139 GUSBP1Q15486 140 aa17.28■□□□□ 0.36
TUBGCP3-204ENST00000464139 IGFL2Q6UWQ7 119 aa17.28■□□□□ 0.36
TUBGCP3-204ENST00000464139 IFT22Q9H7X7 185 aa17.28■□□□□ 0.36
TUBGCP3-204ENST00000464139 BORCS7-ASMTA0A0B4J1R7 106 aa17.28■□□□□ 0.36
TUBGCP3-204ENST00000464139 TRAV17A0A0B4J275 112 aa17.28■□□□□ 0.36
TUBGCP3-204ENST00000464139 J3QW42 95 aa17.28■□□□□ 0.36
TUBGCP3-204ENST00000464139 ERVK11-1P61568 191 aa17.28■□□□□ 0.36
TUBGCP3-204ENST00000464139 FOXF2Q12947 444 aa17.28■□□□□ 0.36
TUBGCP3-204ENST00000464139 H1FOOQ8IZA3 346 aaPredicted RBP17.28■□□□□ 0.36
TUBGCP3-204ENST00000464139 SVBPQ8N300 66 aa17.28■□□□□ 0.36
TUBGCP3-204ENST00000464139 BOD1Q96IK1 185 aa17.28■□□□□ 0.36
TUBGCP3-204ENST00000464139 PARP11Q9NR21 331 aa17.28■□□□□ 0.36
TUBGCP3-204ENST00000464139 ZNF292O60281 2723 aa17.28■□□□□ 0.36
TUBGCP3-204ENST00000464139 GTF3C1Q12789 2109 aa17.28■□□□□ 0.36
TUBGCP3-204ENST00000464139 ZFHX2Q9C0A1 2572 aaPredicted RBP17.27■□□□□ 0.36
TUBGCP3-204ENST00000464139 SSSCA1O60232 199 aa17.27■□□□□ 0.36
TUBGCP3-204ENST00000464139 NXPH2O95156 264 aa17.27■□□□□ 0.36
TUBGCP3-204ENST00000464139 RAC2P15153 192 aa17.27■□□□□ 0.36
TUBGCP3-204ENST00000464139 EWSR1Q01844 656 aaKnown RBP eCLIP17.27■□□□□ 0.36
TUBGCP3-204ENST00000464139 SWI5Q1ZZU3 235 aa17.27■□□□□ 0.36
TUBGCP3-204ENST00000464139 INO80CQ6PI98 192 aaPredicted RBP17.27■□□□□ 0.36
TUBGCP3-204ENST00000464139 HSD17B11Q8NBQ5 300 aa17.27■□□□□ 0.36
TUBGCP3-204ENST00000464139 SH3BGRL3Q9H299 93 aa17.27■□□□□ 0.36
TUBGCP3-204ENST00000464139 C11orf1Q9H5F2 150 aa17.27■□□□□ 0.36
TUBGCP3-204ENST00000464139 TINAGQ9UJW2 476 aa17.27■□□□□ 0.36
TUBGCP3-204ENST00000464139 OR8U9P0C7N5 309 aa17.27■□□□□ 0.35
TUBGCP3-204ENST00000464139 HOXA4Q00056 320 aaPredicted RBP17.27■□□□□ 0.35
TUBGCP3-204ENST00000464139 NMSQ5H8A3 153 aa17.27■□□□□ 0.35
TUBGCP3-204ENST00000464139 OR2C3Q8N628 320 aa17.27■□□□□ 0.35
TUBGCP3-204ENST00000464139 OR8U1Q8NH10 309 aa17.27■□□□□ 0.35
TUBGCP3-204ENST00000464139 OR51H1Q8NH63 302 aa17.27■□□□□ 0.35
TUBGCP3-204ENST00000464139 KLF14Q8TD94 323 aaPredicted RBP17.27■□□□□ 0.35
TUBGCP3-204ENST00000464139 NRIP2Q9BQI9 281 aa17.27■□□□□ 0.35
TUBGCP3-204ENST00000464139 POLDIP2Q9Y2S7 368 aa17.27■□□□□ 0.35
TUBGCP3-204ENST00000464139 KIAA2026Q5HYC2 2103 aa17.27■□□□□ 0.35
TUBGCP3-204ENST00000464139 TRIM77I1YAP6 450 aa17.26■□□□□ 0.35
TUBGCP3-204ENST00000464139 AQP7O14520 342 aa17.26■□□□□ 0.35
TUBGCP3-204ENST00000464139 FHITP49789 147 aa17.26■□□□□ 0.35
TUBGCP3-204ENST00000464139 OR8G1Q15617 311 aa17.26■□□□□ 0.35
TUBGCP3-204ENST00000464139 C10orf91Q5T1B1 145 aa17.26■□□□□ 0.35
TUBGCP3-204ENST00000464139 CXorf67Q86X51 503 aaPredicted RBP17.26■□□□□ 0.35
TUBGCP3-204ENST00000464139 SPIN2AQ99865 258 aa17.26■□□□□ 0.35
TUBGCP3-204ENST00000464139 SPIN2BQ9BPZ2 258 aa17.26■□□□□ 0.35
TUBGCP3-204ENST00000464139 GINS3Q9BRX5 216 aa17.26■□□□□ 0.35
TUBGCP3-204ENST00000464139 FAM212BQ9NTI7 297 aaPredicted RBP17.26■□□□□ 0.35
TUBGCP3-204ENST00000464139 IGSF23A1L1A6 192 aa17.26■□□□□ 0.35
TUBGCP3-204ENST00000464139 PGA5P0DJD9 388 aa17.26■□□□□ 0.35
TUBGCP3-204ENST00000464139 OMGP23515 440 aa17.26■□□□□ 0.35
TUBGCP3-204ENST00000464139 CEBPDP49716 269 aaPredicted RBP17.26■□□□□ 0.35
TUBGCP3-204ENST00000464139 F2RL1P55085 397 aa17.26■□□□□ 0.35
TUBGCP3-204ENST00000464139 TMEM88Q6PEY1 159 aa17.26■□□□□ 0.35
TUBGCP3-204ENST00000464139 CABLES2Q9BTV7 478 aa17.26■□□□□ 0.35
TUBGCP3-204ENST00000464139 OBP2BQ9NPH6 170 aa17.26■□□□□ 0.35
TUBGCP3-204ENST00000464139 TRAPPC2LQ9UL33 140 aa17.26■□□□□ 0.35
TUBGCP3-204ENST00000464139 IQCF6A8MYZ5 107 aa17.25■□□□□ 0.35
TUBGCP3-204ENST00000464139 H0Y980 276 aa17.25■□□□□ 0.35
TUBGCP3-204ENST00000464139 RNASEK-C17orf49H0YIS7 233 aa17.25■□□□□ 0.35
TUBGCP3-204ENST00000464139 C1QL1O75973 258 aa17.25■□□□□ 0.35
TUBGCP3-204ENST00000464139 VDAC1P21796 283 aa17.25■□□□□ 0.35
TUBGCP3-204ENST00000464139 F2RP25116 425 aa17.25■□□□□ 0.35
TUBGCP3-204ENST00000464139 CLINT1Q14677 625 aa17.25■□□□□ 0.35
TUBGCP3-204ENST00000464139 ZNF497Q6ZNH5 498 aa17.25■□□□□ 0.35
TUBGCP3-204ENST00000464139 WDR31Q8NA23 367 aa17.25■□□□□ 0.35
TUBGCP3-204ENST00000464139 OR14J1Q9UGF5 321 aa17.25■□□□□ 0.35
TUBGCP3-204ENST00000464139 CARHSP1Q9Y2V2 147 aaKnown RBP17.25■□□□□ 0.35
TUBGCP3-204ENST00000464139 SPP1P10451 314 aa17.25■□□□□ 0.35
TUBGCP3-204ENST00000464139 HOXC12P31275 282 aa17.25■□□□□ 0.35
TUBGCP3-204ENST00000464139 CD80P33681 288 aa17.25■□□□□ 0.35
TUBGCP3-204ENST00000464139 Q8IYB0 196 aa17.25■□□□□ 0.35
TUBGCP3-204ENST00000464139 OR5D13Q8NGL4 314 aa17.25■□□□□ 0.35
TUBGCP3-204ENST00000464139 FZR1Q9UM11 496 aa17.25■□□□□ 0.35
TUBGCP3-204ENST00000464139 INTS1Q8N201 2190 aaKnown RBP17.24■□□□□ 0.35
TUBGCP3-204ENST00000464139 MED19A0JLT2 244 aaPredicted RBP17.24■□□□□ 0.35
TUBGCP3-204ENST00000464139 C9JQL5 133 aa17.24■□□□□ 0.35
TUBGCP3-204ENST00000464139 SEC11BP0C7V7 166 aa17.24■□□□□ 0.35
TUBGCP3-204ENST00000464139 CBR1P16152 277 aa17.24■□□□□ 0.35
TUBGCP3-204ENST00000464139 ZNF826PQ6ZT77 177 aa17.24■□□□□ 0.35
TUBGCP3-204ENST00000464139 SARAFQ96BY9 339 aa17.24■□□□□ 0.35
TUBGCP3-204ENST00000464139 RFNGQ9Y644 331 aa17.24■□□□□ 0.35
TUBGCP3-204ENST00000464139 A0A0G2JRQ6 117 aa17.24■□□□□ 0.35
TUBGCP3-204ENST00000464139 MLNRO43193 412 aa17.24■□□□□ 0.35
TUBGCP3-204ENST00000464139 PSG2P11465 335 aa17.24■□□□□ 0.35
TUBGCP3-204ENST00000464139 EPHA1P21709 976 aa17.24■□□□□ 0.35
TUBGCP3-204ENST00000464139 ZNF616Q08AN1 781 aa17.24■□□□□ 0.35
TUBGCP3-204ENST00000464139 OR10V1Q8NGI7 309 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms