RNA–Protein interactions for RNA: ENST00000463705.5

CHRNA4-202, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 5,201 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-202ENST00000463705 STPG2Q8N412 459 aa11.71□□□□□ -0.54
CHRNA4-202ENST00000463705 MRPL24Q96A35 216 aaKnown RBP11.71□□□□□ -0.54
CHRNA4-202ENST00000463705 OR2J1Q9GZK6 312 aa11.71□□□□□ -0.54
CHRNA4-202ENST00000463705 Q9N2K0 584 aa11.71□□□□□ -0.54
CHRNA4-202ENST00000463705 TRAPPC1Q9Y5R8 145 aa11.71□□□□□ -0.54
CHRNA4-202ENST00000463705 SH2D7A6NKC9 451 aaPredicted RBP11.71□□□□□ -0.54
CHRNA4-202ENST00000463705 FCGR3AP08637 254 aa11.71□□□□□ -0.54
CHRNA4-202ENST00000463705 LGALS7P47929 136 aa11.71□□□□□ -0.54
CHRNA4-202ENST00000463705 RANP62826 216 aaKnown RBP11.71□□□□□ -0.54
CHRNA4-202ENST00000463705 PDZD11Q5EBL8 140 aa11.71□□□□□ -0.54
CHRNA4-202ENST00000463705 CD200R1LQ6Q8B3 271 aa11.71□□□□□ -0.54
CHRNA4-202ENST00000463705 SEZ6L2Q6UXD5 910 aa11.71□□□□□ -0.54
CHRNA4-202ENST00000463705 C9orf62Q8N4C0 152 aa11.71□□□□□ -0.54
CHRNA4-202ENST00000463705 OR52L2PQ8NGH6 319 aa11.71□□□□□ -0.54
CHRNA4-202ENST00000463705 UCP2P55851 309 aa11.7□□□□□ -0.54
CHRNA4-202ENST00000463705 FAM103A1Q9BTL3 118 aaKnown RBP11.7□□□□□ -0.54
CHRNA4-202ENST00000463705 SLC25A22Q9H936 323 aa11.7□□□□□ -0.54
CHRNA4-202ENST00000463705 CEP290O15078 2479 aa11.7□□□□□ -0.54
CHRNA4-202ENST00000463705 TRBV5-7A0A0A0MS05 114 aa11.7□□□□□ -0.54
CHRNA4-202ENST00000463705 RBFOX3A6NFN3 312 aa11.7□□□□□ -0.54
CHRNA4-202ENST00000463705 MS4A18H0YCH9 400 aa11.7□□□□□ -0.54
CHRNA4-202ENST00000463705 MS4A18Q3C1V0 323 aa11.7□□□□□ -0.54
CHRNA4-202ENST00000463705 C1orf100Q5SVJ3 147 aa11.7□□□□□ -0.54
CHRNA4-202ENST00000463705 GCSAMQ8N6F7 178 aa11.7□□□□□ -0.54
CHRNA4-202ENST00000463705 C7orf66A4D0T2 115 aa11.7□□□□□ -0.54
CHRNA4-202ENST00000463705 F2RL2O00254 374 aa11.7□□□□□ -0.54
CHRNA4-202ENST00000463705 TMPRSS3P57727 454 aa11.7□□□□□ -0.54
CHRNA4-202ENST00000463705 RPEL1Q2QD12 228 aa11.7□□□□□ -0.54
CHRNA4-202ENST00000463705 PLAC9Q5JTB6 97 aa11.7□□□□□ -0.54
CHRNA4-202ENST00000463705 UNC13CQ8NB66 2214 aa11.7□□□□□ -0.54
CHRNA4-202ENST00000463705 FLYWCH2Q96CP2 140 aaKnown RBP11.7□□□□□ -0.54
CHRNA4-202ENST00000463705 FAM122AQ96E09 287 aa11.7□□□□□ -0.54
CHRNA4-202ENST00000463705 PPIAL4EA0A075B759 164 aa11.7□□□□□ -0.54
CHRNA4-202ENST00000463705 A0A1W2PQM1 296 aa11.7□□□□□ -0.54
CHRNA4-202ENST00000463705 PPIAL4DF5H284 164 aa11.7□□□□□ -0.54
CHRNA4-202ENST00000463705 PPIAL4FP0DN26 164 aa11.7□□□□□ -0.54
CHRNA4-202ENST00000463705 S100A4P26447 101 aaKnown RBP11.7□□□□□ -0.54
CHRNA4-202ENST00000463705 PGLYRP3Q96LB9 341 aa11.7□□□□□ -0.54
CHRNA4-202ENST00000463705 NAT8Q9UHE5 227 aa11.7□□□□□ -0.54
CHRNA4-202ENST00000463705 PPIAL4AQ9Y536 164 aa11.7□□□□□ -0.54
CHRNA4-202ENST00000463705 SYNGR1O43759 233 aa11.69□□□□□ -0.54
CHRNA4-202ENST00000463705 EWSR1Q01844 656 aaKnown RBP eCLIP11.69□□□□□ -0.54
CHRNA4-202ENST00000463705 SPINK9Q5DT21 86 aa11.69□□□□□ -0.54
CHRNA4-202ENST00000463705 DOLPP1Q86YN1 238 aa11.69□□□□□ -0.54
CHRNA4-202ENST00000463705 TCTEX1D1Q8N7M0 179 aa11.69□□□□□ -0.54
CHRNA4-202ENST00000463705 MARS2Q96GW9 593 aaKnown RBP11.69□□□□□ -0.54
CHRNA4-202ENST00000463705 PKIBQ9C010 78 aa11.69□□□□□ -0.54
CHRNA4-202ENST00000463705 UBTD1Q9HAC8 227 aa11.69□□□□□ -0.54
CHRNA4-202ENST00000463705 ZNF236Q9UL36 1845 aa11.69□□□□□ -0.54
CHRNA4-202ENST00000463705 OR5H1A6NKK0 313 aa11.69□□□□□ -0.54
CHRNA4-202ENST00000463705 CCL21O00585 134 aa11.69□□□□□ -0.54
CHRNA4-202ENST00000463705 MMP9P14780 707 aa11.69□□□□□ -0.54
CHRNA4-202ENST00000463705 RPS4XP62701 263 aaKnown RBP11.69□□□□□ -0.54
CHRNA4-202ENST00000463705 COL10A1Q03692 680 aa11.69□□□□□ -0.54
CHRNA4-202ENST00000463705 WDR73Q6P4I2 378 aa11.69□□□□□ -0.54
CHRNA4-202ENST00000463705 SAXO1Q8IYX7 474 aa11.69□□□□□ -0.54
CHRNA4-202ENST00000463705 ADAD2Q8NCV1 583 aaKnown RBP11.69□□□□□ -0.54
CHRNA4-202ENST00000463705 OR1K1Q8NGR3 316 aa11.69□□□□□ -0.54
CHRNA4-202ENST00000463705 RASL11BQ9BPW5 248 aa11.69□□□□□ -0.54
CHRNA4-202ENST00000463705 SLC7A10Q9NS82 523 aa11.69□□□□□ -0.54
CHRNA4-202ENST00000463705 PRR13Q9NZ81 148 aa11.69□□□□□ -0.54
CHRNA4-202ENST00000463705 OR1A1Q9P1Q5 309 aa11.69□□□□□ -0.54
CHRNA4-202ENST00000463705 VSIG4Q9Y279 399 aa11.69□□□□□ -0.54
CHRNA4-202ENST00000463705 CASP8AP2Q9UKL3 1982 aa11.69□□□□□ -0.54
CHRNA4-202ENST00000463705 MGST3O14880 152 aa11.69□□□□□ -0.54
CHRNA4-202ENST00000463705 IGKV3-11P04433 115 aa11.69□□□□□ -0.54
CHRNA4-202ENST00000463705 SPINK2P20155 84 aa11.69□□□□□ -0.54
CHRNA4-202ENST00000463705 PRDX2P32119 198 aa11.69□□□□□ -0.54
CHRNA4-202ENST00000463705 TMEM50BP56557 158 aa11.69□□□□□ -0.54
CHRNA4-202ENST00000463705 CCDC144NLQ6NUI1 221 aa11.69□□□□□ -0.54
CHRNA4-202ENST00000463705 TMEM65Q6PI78 240 aa11.69□□□□□ -0.54
CHRNA4-202ENST00000463705 GATCO43716 136 aaKnown RBP11.69□□□□□ -0.54
CHRNA4-202ENST00000463705 DAOP14920 347 aa11.69□□□□□ -0.54
CHRNA4-202ENST00000463705 LAIR2Q6ISS4 152 aa11.69□□□□□ -0.54
CHRNA4-202ENST00000463705 C19orf35Q6ZS72 473 aa11.69□□□□□ -0.54
CHRNA4-202ENST00000463705 KLHDC1Q8N7A1 406 aa11.69□□□□□ -0.54
CHRNA4-202ENST00000463705 SUMO1P63165 101 aaKnown RBP11.68□□□□□ -0.54
CHRNA4-202ENST00000463705 FA2HQ7L5A8 372 aa11.68□□□□□ -0.54
CHRNA4-202ENST00000463705 PDPNQ86YL7 162 aa11.68□□□□□ -0.54
CHRNA4-202ENST00000463705 AMELYQ99218 206 aa11.68□□□□□ -0.54
CHRNA4-202ENST00000463705 TMPRSS5Q9H3S3 457 aa11.68□□□□□ -0.54
CHRNA4-202ENST00000463705 SLC25A10Q9UBX3 287 aaPredicted RBP11.68□□□□□ -0.54
CHRNA4-202ENST00000463705 LYZP61626 148 aa11.68□□□□□ -0.54
CHRNA4-202ENST00000463705 C4orf17Q53FE4 359 aa11.68□□□□□ -0.54
CHRNA4-202ENST00000463705 FDX2Q6P4F2 183 aa11.68□□□□□ -0.54
CHRNA4-202ENST00000463705 KCNMB2Q9Y691 235 aa11.68□□□□□ -0.54
CHRNA4-202ENST00000463705 IGKV1D-42A0A075B6H8 117 aa11.68□□□□□ -0.54
CHRNA4-202ENST00000463705 ACP1P24666 158 aa11.68□□□□□ -0.54
CHRNA4-202ENST00000463705 UBE2L3P68036 154 aaKnown RBP11.68□□□□□ -0.54
CHRNA4-202ENST00000463705 COX19Q49B96 90 aa11.68□□□□□ -0.54
CHRNA4-202ENST00000463705 CRIPAKQ8N1N5 446 aa11.68□□□□□ -0.54
CHRNA4-202ENST00000463705 PRR7Q8TB68 274 aa11.68□□□□□ -0.54
CHRNA4-202ENST00000463705 ANAPC16Q96DE5 110 aa11.68□□□□□ -0.54
CHRNA4-202ENST00000463705 NOL4LQ96MY1 436 aaPredicted RBP11.68□□□□□ -0.54
CHRNA4-202ENST00000463705 NKX2-6A6NCS4 301 aa11.68□□□□□ -0.54
CHRNA4-202ENST00000463705 TMEM229AB2RXF0 380 aa11.68□□□□□ -0.54
CHRNA4-202ENST00000463705 J3QW42 95 aa11.68□□□□□ -0.54
CHRNA4-202ENST00000463705 PRDM14Q9GZV8 571 aa11.68□□□□□ -0.54
CHRNA4-202ENST00000463705 FAM206AQ9NX38 181 aa11.68□□□□□ -0.54
CHRNA4-202ENST00000463705 PSME4Q14997 1843 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms