RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, human

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-223	ENST00000463004	FAM169B	Q8N8A8	192 aa		10.12	□□□□□ -0.79
RBM39-223	ENST00000463004	ST6GAL2	Q96JF0	529 aa		10.12	□□□□□ -0.79
RBM39-223	ENST00000463004	ADGRG7	Q96K78	797 aa		10.12	□□□□□ -0.79
RBM39-223	ENST00000463004		E9PQ18	207 aa		10.12	□□□□□ -0.79
RBM39-223	ENST00000463004	SLC25A4	P12235	298 aa		10.12	□□□□□ -0.79
RBM39-223	ENST00000463004	SLC35E4	Q6ICL7	350 aa		10.12	□□□□□ -0.79
RBM39-223	ENST00000463004	DTX1	Q86Y01	620 aa		10.12	□□□□□ -0.79
RBM39-223	ENST00000463004	OR2C3	Q8N628	320 aa		10.12	□□□□□ -0.79
RBM39-223	ENST00000463004	C9orf106	Q8NAJ2	232 aa		10.12	□□□□□ -0.79
RBM39-223	ENST00000463004	MOB3A	Q96BX8	217 aa		10.12	□□□□□ -0.79
RBM39-223	ENST00000463004	PARD6A	Q9NPB6	346 aa		10.12	□□□□□ -0.79
RBM39-223	ENST00000463004	PRND	Q9UKY0	176 aa		10.12	□□□□□ -0.79
RBM39-223	ENST00000463004		A0A1W2PN81	502 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	FCGR3B	O75015	233 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	OR4A8	P0C604	315 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	GLI4	P10075	376 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	CRYGS	P22914	178 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	CHRNA7	P36544	502 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	MPV17	P39210	176 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	AKR1D1	P51857	326 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	TMEM65	Q6PI78	240 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	UQCC3	Q6UW78	93 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	RFESD	Q8TAC1	157 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	RNASE6	Q93091	150 aa	Known RBP	10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	SDSL	Q96GA7	329 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	GCM1	Q9NP62	436 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	DLL3	Q9NYJ7	618 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	OPN4	Q9UHM6	478 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	PINLYP	A6NC86	204 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	OR2H2	O95918	312 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	MBP	P02686	304 aa	Predicted RBP	10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	CECR9	P0C854	216 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	NQO2	P16083	231 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	APOBEC3A	P31941	199 aa	Predicted RBP	10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	COL10A1	Q03692	680 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	MOB3B	Q86TA1	216 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	ZNF596	Q8TC21	504 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	ARV1	Q9H2C2	271 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	SLC35D1	Q9NTN3	355 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	CISD1	Q9NZ45	108 aa	Known RBP	10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	SLC25A10	Q9UBX3	287 aa	Predicted RBP	10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	CLN8	Q9UBY8	286 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	TRIM77	I1YAP6	450 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	KRAS	P01116	189 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	HOXD11	P31277	338 aa	Predicted RBP	10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	ERVFRD-1	P60508	538 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	IFITM3	Q01628	133 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	ZNF816	Q0VGE8	651 aa	Predicted RBP	10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	ZNF345	Q14585	488 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	MIDN	Q504T8	468 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	IL34	Q6ZMJ4	242 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	ZNF561	Q8N587	486 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	ITLN1	Q8WWA0	313 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	BARX1	Q9HBU1	254 aa	Predicted RBP	10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	UQCC1	Q9NVA1	299 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004		H0Y980	276 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004		K7EQM0	130 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	AGPAT2	O15120	278 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	LANCL1	O43813	399 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	HIST1H3A	P68431	136 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	OR2B11	Q5JQS5	317 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	HIST2H3PS2	Q5TEC6	136 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	ZNF529	Q6P280	563 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	HIST2H3A	Q71DI3	136 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	POC1A	Q8NBT0	407 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	TREM2	Q9NZC2	230 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	ONECUT1	Q9UBC0	465 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	SPRR3	Q9UBC9	169 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	JPT1	Q9UK76	154 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	BOLA1	Q9Y3E2	137 aa		10.11	□□□□□ -0.79
RBM39-223	ENST00000463004	FAM186A	A6NE01	2351 aa		10.1	□□□□□ -0.79
RBM39-223	ENST00000463004	ATP6V1G2-DDX39B	F2Z307	99 aa		10.1	□□□□□ -0.79
RBM39-223	ENST00000463004	CD40	P25942	277 aa		10.1	□□□□□ -0.79
RBM39-223	ENST00000463004	SP6	Q3SY56	376 aa		10.1	□□□□□ -0.79
RBM39-223	ENST00000463004	VWA1	Q6PCB0	445 aa		10.1	□□□□□ -0.79
RBM39-223	ENST00000463004	TEX261	Q6UWH6	196 aa		10.1	□□□□□ -0.79
RBM39-223	ENST00000463004	GAPT	Q8N292	157 aa		10.1	□□□□□ -0.79
RBM39-223	ENST00000463004	ADAMTS17	Q8TE56	1095 aa		10.1	□□□□□ -0.79
RBM39-223	ENST00000463004		U3KQ87	197 aa		10.1	□□□□□ -0.79
RBM39-223	ENST00000463004	EP300	Q09472	2414 aa	Predicted RBP	10.1	□□□□□ -0.79
RBM39-223	ENST00000463004	ANKRD34B	A5PLL1	514 aa		10.1	□□□□□ -0.79
RBM39-223	ENST00000463004	RAB29	O14966	203 aa		10.1	□□□□□ -0.79
RBM39-223	ENST00000463004	GPR6	P46095	362 aa	Predicted RBP	10.1	□□□□□ -0.79
RBM39-223	ENST00000463004	RPL31	P62899	125 aa	Known RBP	10.1	□□□□□ -0.79
RBM39-223	ENST00000463004	TBR1	Q16650	682 aa		10.1	□□□□□ -0.79
RBM39-223	ENST00000463004	SSX9	Q7RTT3	188 aa		10.1	□□□□□ -0.79
RBM39-223	ENST00000463004	MALSU1	Q96EH3	234 aa		10.1	□□□□□ -0.79
RBM39-223	ENST00000463004	CNOT1	A5YKK6	2376 aa	Known RBP	10.1	□□□□□ -0.79
RBM39-223	ENST00000463004	IGHV2OR16-5	A0A0B4J2B6	119 aa		10.1	□□□□□ -0.79
RBM39-223	ENST00000463004	MC5R	P33032	325 aa		10.1	□□□□□ -0.79
RBM39-223	ENST00000463004	GNB2	P62879	340 aa		10.1	□□□□□ -0.79
RBM39-223	ENST00000463004	RAB32	Q13637	225 aa		10.1	□□□□□ -0.79
RBM39-223	ENST00000463004	EXOSC2	Q13868	293 aa	Known RBP	10.1	□□□□□ -0.79
RBM39-223	ENST00000463004	KCNIP4	Q6PIL6	250 aa		10.1	□□□□□ -0.79
RBM39-223	ENST00000463004	CXorf58	Q96LI9	332 aa		10.1	□□□□□ -0.79
RBM39-223	ENST00000463004	LURAP1	Q96LR2	239 aa		10.1	□□□□□ -0.79
RBM39-223	ENST00000463004	NIPSNAP3B	Q9BS92	247 aa		10.1	□□□□□ -0.79
RBM39-223	ENST00000463004	THYN1	Q9P016	225 aa		10.1	□□□□□ -0.79
RBM39-223	ENST00000463004	CACNG5	Q9UF02	275 aa		10.1	□□□□□ -0.79
RBM39-223	ENST00000463004	MIOX	Q9UGB7	285 aa		10.1	□□□□□ -0.79

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