RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 MBNL3Q9NUK0 354 aaKnown RBP9.23□□□□□ -0.93
SSBP1-202ENST00000461433 A0A075B6Q4 140 aa9.22□□□□□ -0.93
SSBP1-202ENST00000461433 TRBV6-6A0A0A6YYG2 114 aa9.22□□□□□ -0.93
SSBP1-202ENST00000461433 A0A0A6YYH2 397 aa9.22□□□□□ -0.93
SSBP1-202ENST00000461433 CENPVL3A0A0U1RRI6 287 aa9.22□□□□□ -0.93
SSBP1-202ENST00000461433 KBTBD11-OT1A0A1B0GTJ5 212 aa9.22□□□□□ -0.93
SSBP1-202ENST00000461433 A6NJ64 397 aa9.22□□□□□ -0.93
SSBP1-202ENST00000461433 RNASEK-C17orf49H0YIS7 233 aa9.22□□□□□ -0.93
SSBP1-202ENST00000461433 CTDSP2O14595 271 aa9.22□□□□□ -0.93
SSBP1-202ENST00000461433 SCGNO76038 276 aa9.22□□□□□ -0.93
SSBP1-202ENST00000461433 APOA1P02647 267 aa9.22□□□□□ -0.93
SSBP1-202ENST00000461433 IGHV1-8P0DP01 117 aa9.22□□□□□ -0.93
SSBP1-202ENST00000461433 IGHV4-38-2P0DP08 117 aa9.22□□□□□ -0.93
SSBP1-202ENST00000461433 HOXB4P17483 251 aaPredicted RBP9.22□□□□□ -0.93
SSBP1-202ENST00000461433 GZMHP20718 246 aa9.22□□□□□ -0.93
SSBP1-202ENST00000461433 SSTR5P35346 364 aa9.22□□□□□ -0.93
SSBP1-202ENST00000461433 GLP1RP43220 463 aa9.22□□□□□ -0.93
SSBP1-202ENST00000461433 UTF1Q5T230 341 aa9.22□□□□□ -0.93
SSBP1-202ENST00000461433 MZT2AQ6P582 158 aa9.22□□□□□ -0.93
SSBP1-202ENST00000461433 BAIAP2L2Q6UXY1 529 aa9.22□□□□□ -0.93
SSBP1-202ENST00000461433 HEPN1Q6WQI6 88 aa9.22□□□□□ -0.93
SSBP1-202ENST00000461433 DTX3Q8N9I9 347 aa9.22□□□□□ -0.93
SSBP1-202ENST00000461433 S100A16Q96FQ6 103 aaKnown RBP9.22□□□□□ -0.93
SSBP1-202ENST00000461433 CALYQ9NYX4 217 aa9.22□□□□□ -0.93
SSBP1-202ENST00000461433 MXRA5Q9NR99 2828 aa9.21□□□□□ -0.93
SSBP1-202ENST00000461433 TRAV18A0A075B6X5 111 aa9.21□□□□□ -0.93
SSBP1-202ENST00000461433 TRAV40A0A0B4J280 105 aa9.21□□□□□ -0.93
SSBP1-202ENST00000461433 SERPINE3A8MV23 424 aa9.21□□□□□ -0.93
SSBP1-202ENST00000461433 C12orf77C9JDV5 145 aa9.21□□□□□ -0.93
SSBP1-202ENST00000461433 XRCC3O43542 346 aa9.21□□□□□ -0.93
SSBP1-202ENST00000461433 ORC5O43913 435 aa9.21□□□□□ -0.93
SSBP1-202ENST00000461433 CLPXO76031 633 aa9.21□□□□□ -0.93
SSBP1-202ENST00000461433 MELTFP08582 738 aa9.21□□□□□ -0.93
SSBP1-202ENST00000461433 GSTP1P09211 210 aaKnown RBP9.21□□□□□ -0.93
SSBP1-202ENST00000461433 OMGP23515 440 aa9.21□□□□□ -0.93
SSBP1-202ENST00000461433 KLRD1Q13241 179 aa9.21□□□□□ -0.93
SSBP1-202ENST00000461433 PRAMEF5Q5TYX0 476 aa9.21□□□□□ -0.93
SSBP1-202ENST00000461433 HACD4Q5VWC8 232 aa9.21□□□□□ -0.93
SSBP1-202ENST00000461433 NANPQ8TBE9 248 aa9.21□□□□□ -0.93
SSBP1-202ENST00000461433 LHX4Q969G2 390 aa9.21□□□□□ -0.93
SSBP1-202ENST00000461433 CMSS1Q9BQ75 279 aaKnown RBP9.21□□□□□ -0.93
SSBP1-202ENST00000461433 DCUN1D5Q9BTE7 237 aa9.21□□□□□ -0.93
SSBP1-202ENST00000461433 GAL3ST2Q9H3Q3 398 aa9.21□□□□□ -0.93
SSBP1-202ENST00000461433 RIMS4Q9H426 269 aaPredicted RBP9.21□□□□□ -0.93
SSBP1-202ENST00000461433 DIABLOQ9NR28 239 aa9.21□□□□□ -0.93
SSBP1-202ENST00000461433 CDC42EP3Q9UKI2 254 aa9.21□□□□□ -0.93
SSBP1-202ENST00000461433 TRAPPC2LQ9UL33 140 aa9.21□□□□□ -0.93
SSBP1-202ENST00000461433 IGHV3OR16-10A0A075B7F0 116 aa9.2□□□□□ -0.94
SSBP1-202ENST00000461433 TMEM235A6NFC5 223 aa9.2□□□□□ -0.94
SSBP1-202ENST00000461433 SSX5O60225 188 aa9.2□□□□□ -0.94
SSBP1-202ENST00000461433 CRLF1O75462 422 aa9.2□□□□□ -0.94
SSBP1-202ENST00000461433 PTHLHP12272 177 aa9.2□□□□□ -0.94
SSBP1-202ENST00000461433 ARL6IP1Q15041 203 aa9.2□□□□□ -0.94
SSBP1-202ENST00000461433 ZNF782Q6ZMW2 699 aaPredicted RBP9.2□□□□□ -0.94
SSBP1-202ENST00000461433 PDZD9Q8IXQ8 264 aa9.2□□□□□ -0.94
SSBP1-202ENST00000461433 IZUMO1Q8IYV9 350 aa9.2□□□□□ -0.94
SSBP1-202ENST00000461433 RFESDQ8TAC1 157 aa9.2□□□□□ -0.94
SSBP1-202ENST00000461433 UBALD1Q8TB05 177 aa9.2□□□□□ -0.94
SSBP1-202ENST00000461433 ARL11Q969Q4 196 aa9.2□□□□□ -0.94
SSBP1-202ENST00000461433 KIRREL1Q96J84 757 aa9.2□□□□□ -0.94
SSBP1-202ENST00000461433 BEX2Q9BXY8 128 aa9.2□□□□□ -0.94
SSBP1-202ENST00000461433 AUNIPQ9H7T9 357 aa9.2□□□□□ -0.94
SSBP1-202ENST00000461433 Q9N2K0 584 aa9.2□□□□□ -0.94
SSBP1-202ENST00000461433 C12orf4Q9NQ89 552 aa9.2□□□□□ -0.94
SSBP1-202ENST00000461433 SOX21Q9Y651 276 aaPredicted RBP9.2□□□□□ -0.94
SSBP1-202ENST00000461433 A0A087X0M5 115 aa9.2□□□□□ -0.94
SSBP1-202ENST00000461433 A0A1B0GX30 115 aa9.2□□□□□ -0.94
SSBP1-202ENST00000461433 hCG_1809904A0A1W2PP81 198 aa9.2□□□□□ -0.94
SSBP1-202ENST00000461433 A0A1W2PPE2 198 aa9.2□□□□□ -0.94
SSBP1-202ENST00000461433 A0A1W2PR64 198 aa9.2□□□□□ -0.94
SSBP1-202ENST00000461433 A0A1W2PRV1 198 aa9.2□□□□□ -0.94
SSBP1-202ENST00000461433 POM121CA8CG34 1229 aa9.2□□□□□ -0.94
SSBP1-202ENST00000461433 F2RL2O00254 374 aa9.2□□□□□ -0.94
SSBP1-202ENST00000461433 HLA-DQB1P01920 261 aa9.2□□□□□ -0.94
SSBP1-202ENST00000461433 FCGR3AP08637 254 aa9.2□□□□□ -0.94
SSBP1-202ENST00000461433 CD3GP09693 182 aa9.2□□□□□ -0.94
SSBP1-202ENST00000461433 HNF1AP20823 631 aa9.2□□□□□ -0.94
SSBP1-202ENST00000461433 LOXL3P58215 753 aa9.2□□□□□ -0.94
SSBP1-202ENST00000461433 HMGN3Q15651 99 aa9.2□□□□□ -0.94
SSBP1-202ENST00000461433 TUSC1Q2TAM9 212 aa9.2□□□□□ -0.94
SSBP1-202ENST00000461433 RUSC1-AS1Q66K80 236 aa9.2□□□□□ -0.94
SSBP1-202ENST00000461433 FAM53AQ6NSI3 398 aaPredicted RBP9.2□□□□□ -0.94
SSBP1-202ENST00000461433 ZNF554Q86TJ5 538 aa9.2□□□□□ -0.94
SSBP1-202ENST00000461433 LAX1Q8IWV1 398 aa9.2□□□□□ -0.94
SSBP1-202ENST00000461433 PNKDQ8N490 385 aa9.2□□□□□ -0.94
SSBP1-202ENST00000461433 PHF21AQ96BD5 680 aa9.2□□□□□ -0.94
SSBP1-202ENST00000461433 TAF9BQ9HBM6 251 aa9.2□□□□□ -0.94
SSBP1-202ENST00000461433 CHMP1AQ9HD42 196 aaPredicted RBP9.2□□□□□ -0.94
SSBP1-202ENST00000461433 IDI2-AS1Q9NZ38 188 aa9.2□□□□□ -0.94
SSBP1-202ENST00000461433 NUP50Q9UKX7 468 aa9.2□□□□□ -0.94
SSBP1-202ENST00000461433 SESN1Q9Y6P5 492 aa9.2□□□□□ -0.94
SSBP1-202ENST00000461433 ZFHX3Q15911 3703 aa9.19□□□□□ -0.94
SSBP1-202ENST00000461433 MTORP42345 2549 aa9.19□□□□□ -0.94
SSBP1-202ENST00000461433 IGHV1-69DA0A0B4J2H0 117 aa9.19□□□□□ -0.94
SSBP1-202ENST00000461433 IGHV1-69P01742 117 aa9.19□□□□□ -0.94
SSBP1-202ENST00000461433 HBZP02008 142 aa9.19□□□□□ -0.94
SSBP1-202ENST00000461433 UBE2E1P51965 193 aa9.19□□□□□ -0.94
SSBP1-202ENST00000461433 TAS2R20P59543 309 aa9.19□□□□□ -0.94
SSBP1-202ENST00000461433 ARFRP1Q13795 201 aa9.19□□□□□ -0.94
SSBP1-202ENST00000461433 PNLIPRP3Q17RR3 467 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms