RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 TRIB3Q96RU7 358 aa1.72□□□□□ -2.13
VCL-203ENST00000461383 PRSS27Q9BQR3 290 aa1.72□□□□□ -2.13
VCL-203ENST00000461383 TMEM208Q9BTX3 173 aa1.72□□□□□ -2.13
VCL-203ENST00000461383 POTEKPQ9BYX7 375 aa1.72□□□□□ -2.13
VCL-203ENST00000461383 DRC3Q9H069 523 aa1.72□□□□□ -2.13
VCL-203ENST00000461383 METTL9Q9H1A3 318 aa1.72□□□□□ -2.13
VCL-203ENST00000461383 MYO5BQ9ULV0 1848 aa1.72□□□□□ -2.13
VCL-203ENST00000461383 PLXNB1O43157 2135 aa1.72□□□□□ -2.13
VCL-203ENST00000461383 COL4A4P53420 1690 aaPredicted RBP1.71□□□□□ -2.14
VCL-203ENST00000461383 IGKV1OR2-108A0A075B7D4 117 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 C1orf232A0A0U1RR37 186 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 SPRR5A0A1B0GTR4 108 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 DAPL1A0PJW8 107 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 GOLGA6L10A6NI86 522 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 A8MWP4 228 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 B4DEV8 164 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 C8orf87E5RJ46 101 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 F5H5T6 163 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 SOX14O95416 240 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 ASS1P00966 412 aaKnown RBP1.71□□□□□ -2.14
VCL-203ENST00000461383 PDYNP01213 254 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 IGLV6-57P01721 117 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 IGHV3-53P01767 116 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 IGHMP01871 453 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 PSMA1P25786 263 aaKnown RBP1.71□□□□□ -2.14
VCL-203ENST00000461383 TGFBR2P37173 567 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 GABARAPL2P60520 117 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 UBE2G2P60604 165 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 GTF2BQ00403 316 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 COTL1Q14019 142 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 ZNF235Q14590 738 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 IHHQ14623 411 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 ZNF141Q15928 474 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 PYDC2Q56P42 97 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 CENPWQ5EE01 88 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 LCE1CQ5T751 118 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 LCE1BQ5T7P3 118 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 SDHAF4Q5VUM1 108 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 FAM45BPQ6NSW5 357 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 LYZL2Q7Z4W2 148 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 FAM19A3Q7Z5A8 133 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 MTERF4Q7Z6M4 381 aaKnown RBP1.71□□□□□ -2.14
VCL-203ENST00000461383 PLCZ1Q86YW0 608 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 FUNDC1Q8IVP5 155 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 FAM9CQ8IZT9 166 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 MUC15Q8N387 334 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 OR5D18Q8NGL1 313 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 OR4A5Q8NH83 315 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 MAL2Q969L2 176 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 ZNF514Q96K75 400 aaPredicted RBP1.71□□□□□ -2.14
VCL-203ENST00000461383 RBP7Q96R05 134 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 HDHD2Q9H0R4 259 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 ZNF586Q9NXT0 402 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 SCML1Q9UN30 329 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 ATRNO75882 1429 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 SSH2Q76I76 1423 aa1.71□□□□□ -2.14
VCL-203ENST00000461383 FABP12A6NFH5 140 aa1.7□□□□□ -2.14
VCL-203ENST00000461383 FTCDNL1E5RQL4 147 aa1.7□□□□□ -2.14
VCL-203ENST00000461383 TMEM250H0YL14 139 aa1.7□□□□□ -2.14
VCL-203ENST00000461383 H3BMM0 161 aa1.7□□□□□ -2.14
VCL-203ENST00000461383 C15orf65H3BRN8 121 aa1.7□□□□□ -2.14
VCL-203ENST00000461383 SYNGR1O43759 233 aa1.7□□□□□ -2.14
VCL-203ENST00000461383 SYNGR2O43760 224 aa1.7□□□□□ -2.14
VCL-203ENST00000461383 EPPINO95925 133 aa1.7□□□□□ -2.14
VCL-203ENST00000461383 ORM1P02763 201 aa1.7□□□□□ -2.14
VCL-203ENST00000461383 INAFM2P0DMQ5 153 aa1.7□□□□□ -2.14
VCL-203ENST00000461383 GADD45AP24522 165 aa1.7□□□□□ -2.14
VCL-203ENST00000461383 PSMB6P28072 239 aa1.7□□□□□ -2.14
VCL-203ENST00000461383 ADORA1P30542 326 aa1.7□□□□□ -2.14
VCL-203ENST00000461383 GRPRP30550 384 aa1.7□□□□□ -2.14
VCL-203ENST00000461383 GABRA3P34903 492 aa1.7□□□□□ -2.14
VCL-203ENST00000461383 EVI2BP34910 448 aa1.7□□□□□ -2.14
VCL-203ENST00000461383 INPP1P49441 399 aa1.7□□□□□ -2.14
VCL-203ENST00000461383 FAM3AP98173 230 aa1.7□□□□□ -2.14
VCL-203ENST00000461383 CASP8Q14790 479 aa1.7□□□□□ -2.14
VCL-203ENST00000461383 MMDQ15546 238 aa1.7□□□□□ -2.14
VCL-203ENST00000461383 MAPK14Q16539 360 aa1.7□□□□□ -2.14
VCL-203ENST00000461383 CLEC12BQ2HXU8 276 aa1.7□□□□□ -2.14
VCL-203ENST00000461383 ZCWPW2Q504Y3 356 aa1.7□□□□□ -2.14
VCL-203ENST00000461383 HSP90B2PQ58FF3 399 aa1.7□□□□□ -2.14
VCL-203ENST00000461383 TIMM23BQ5SRD1 257 aa1.7□□□□□ -2.14
VCL-203ENST00000461383 HENMT1Q5T8I9 393 aaKnown RBP1.7□□□□□ -2.14
VCL-203ENST00000461383 AMMECR1LQ6DCA0 310 aa1.7□□□□□ -2.14
VCL-203ENST00000461383 SPNS3Q6ZMD2 512 aa1.7□□□□□ -2.14
VCL-203ENST00000461383 C3orf22Q8N5N4 141 aa1.7□□□□□ -2.14
VCL-203ENST00000461383 EIF4E3Q8N5X7 224 aaKnown RBP1.7□□□□□ -2.14
VCL-203ENST00000461383 LINC00304Q8N9R0 145 aa1.7□□□□□ -2.14
VCL-203ENST00000461383 CMTM2Q8TAZ6 248 aa1.7□□□□□ -2.14
VCL-203ENST00000461383 KCTD4Q8WVF5 259 aa1.7□□□□□ -2.14
VCL-203ENST00000461383 APOBEC3DQ96AK3 386 aaPredicted RBP1.7□□□□□ -2.14
VCL-203ENST00000461383 UBE2WQ96B02 151 aa1.7□□□□□ -2.14
VCL-203ENST00000461383 CMBLQ96DG6 245 aa1.7□□□□□ -2.14
VCL-203ENST00000461383 EBNA1BP2Q99848 306 aaKnown RBP1.7□□□□□ -2.14
VCL-203ENST00000461383 CHST5Q9GZS9 411 aa1.7□□□□□ -2.14
VCL-203ENST00000461383 EURLQ9NYK6 297 aa1.7□□□□□ -2.14
VCL-203ENST00000461383 TMEM216Q9P0N5 145 aa1.7□□□□□ -2.14
VCL-203ENST00000461383 GLS2Q9UI32 602 aa1.7□□□□□ -2.14
VCL-203ENST00000461383 PSMD13Q9UNM6 376 aa1.7□□□□□ -2.14
VCL-203ENST00000461383 ATP6V1DQ9Y5K8 247 aa1.7□□□□□ -2.14
VCL-203ENST00000461383 PUS1Q9Y606 427 aaKnown RBP eCLIP1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms