RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 PCDHB16Q9NRJ7 776 aa16.69■□□□□ 0.26
SRM-202ENST00000459997 PSG11Q9UQ72 335 aa16.69■□□□□ 0.26
SRM-202ENST00000459997 LSM2Q9Y333 95 aaKnown RBP16.69■□□□□ 0.26
SRM-202ENST00000459997 TRBV5-7A0A0A0MS05 114 aa16.68■□□□□ 0.26
SRM-202ENST00000459997 A0A1W2PP11 408 aa16.68■□□□□ 0.26
SRM-202ENST00000459997 A0A1W2PPK0 400 aa16.68■□□□□ 0.26
SRM-202ENST00000459997 TMEM30CPA0ZSE6 113 aa16.68■□□□□ 0.26
SRM-202ENST00000459997 G3V4G9 280 aa16.68■□□□□ 0.26
SRM-202ENST00000459997 GTF2F2P13984 249 aa16.68■□□□□ 0.26
SRM-202ENST00000459997 VHLP40337 213 aa16.68■□□□□ 0.26
SRM-202ENST00000459997 IRF3Q14653 427 aa16.68■□□□□ 0.26
SRM-202ENST00000459997 MPV17LQ2QL34 196 aa16.68■□□□□ 0.26
SRM-202ENST00000459997 MND1Q9BWT6 205 aa16.68■□□□□ 0.26
SRM-202ENST00000459997 DUSP21Q9H596 190 aa16.68■□□□□ 0.26
SRM-202ENST00000459997 TPRKBQ9Y3C4 175 aa16.68■□□□□ 0.26
SRM-202ENST00000459997 ADARB2-AS1A8MUL3 147 aa16.67■□□□□ 0.26
SRM-202ENST00000459997 LPLP06858 475 aa16.67■□□□□ 0.26
SRM-202ENST00000459997 FAM106CPP0CH98 169 aa16.67■□□□□ 0.26
SRM-202ENST00000459997 CRHBPP24387 322 aa16.67■□□□□ 0.26
SRM-202ENST00000459997 MADCAM1Q13477 382 aa16.67■□□□□ 0.26
SRM-202ENST00000459997 JAGN1Q8N5M9 183 aa16.67■□□□□ 0.26
SRM-202ENST00000459997 OR5AU1Q8NGC0 362 aa16.67■□□□□ 0.26
SRM-202ENST00000459997 OR10A7Q8NGE5 316 aa16.67■□□□□ 0.26
SRM-202ENST00000459997 NEK7Q8TDX7 302 aa16.67■□□□□ 0.26
SRM-202ENST00000459997 MUL1Q969V5 352 aa16.67■□□□□ 0.26
SRM-202ENST00000459997 R3HDM4Q96D70 268 aa16.67■□□□□ 0.26
SRM-202ENST00000459997 MRPS28Q9Y2Q9 187 aaKnown RBP16.67■□□□□ 0.26
SRM-202ENST00000459997 RRP15Q9Y3B9 282 aaKnown RBP16.67■□□□□ 0.26
SRM-202ENST00000459997 SH2D7A6NKC9 451 aaPredicted RBP16.66■□□□□ 0.26
SRM-202ENST00000459997 AMY1AP04745 511 aa16.66■□□□□ 0.26
SRM-202ENST00000459997 AMY2AP04746 511 aa16.66■□□□□ 0.26
SRM-202ENST00000459997 GPR176Q14439 515 aa16.66■□□□□ 0.26
SRM-202ENST00000459997 SLC16A12Q6ZSM3 486 aa16.66■□□□□ 0.26
SRM-202ENST00000459997 CENPVQ7Z7K6 275 aaPredicted RBP16.66■□□□□ 0.26
SRM-202ENST00000459997 OR4F17Q8NGA8 305 aa16.66■□□□□ 0.26
SRM-202ENST00000459997 OR56B4Q8NH76 319 aa16.66■□□□□ 0.26
SRM-202ENST00000459997 DERL3Q96Q80 235 aa16.66■□□□□ 0.26
SRM-202ENST00000459997 OR4F4Q96R69 305 aa16.66■□□□□ 0.26
SRM-202ENST00000459997 RAB26Q9ULW5 256 aa16.66■□□□□ 0.26
SRM-202ENST00000459997 MAS1P04201 325 aa16.65■□□□□ 0.26
SRM-202ENST00000459997 CD1AP06126 327 aa16.65■□□□□ 0.26
SRM-202ENST00000459997 SNRNP70P08621 437 aaKnown RBP16.65■□□□□ 0.26
SRM-202ENST00000459997 GZMHP20718 246 aa16.65■□□□□ 0.26
SRM-202ENST00000459997 DIAPH2-AS1Q14236 149 aa16.65■□□□□ 0.26
SRM-202ENST00000459997 INSL4Q14641 139 aa16.65■□□□□ 0.26
SRM-202ENST00000459997 SPHARQ15513 63 aa16.65■□□□□ 0.26
SRM-202ENST00000459997 MED22Q15528 200 aa16.65■□□□□ 0.26
SRM-202ENST00000459997 GLIPR1L1Q6UWM5 242 aa16.65■□□□□ 0.26
SRM-202ENST00000459997 DRAM1Q8N682 238 aa16.65■□□□□ 0.26
SRM-202ENST00000459997 OR10X1Q8NGY0 326 aa16.65■□□□□ 0.26
SRM-202ENST00000459997 CCDC107Q8WV48 283 aa16.65■□□□□ 0.26
SRM-202ENST00000459997 A0A1W2PPE3 182 aa16.64■□□□□ 0.25
SRM-202ENST00000459997 A0A1W2PPI3 338 aa16.64■□□□□ 0.25
SRM-202ENST00000459997 A0A1W2PRX2 142 aa16.64■□□□□ 0.25
SRM-202ENST00000459997 FAM90A18PA6NE21 464 aa16.64■□□□□ 0.25
SRM-202ENST00000459997 FAM90A16PA6NEW6 464 aa16.64■□□□□ 0.25
SRM-202ENST00000459997 FAM90A20PA6NIJ5 464 aa16.64■□□□□ 0.25
SRM-202ENST00000459997 FAM90A9PA6NNJ1 464 aa16.64■□□□□ 0.25
SRM-202ENST00000459997 FAM90A12PA8MX19 464 aa16.64■□□□□ 0.25
SRM-202ENST00000459997 FAM90A5PA8MXJ8 464 aa16.64■□□□□ 0.25
SRM-202ENST00000459997 M0QZK8 103 aa16.64■□□□□ 0.25
SRM-202ENST00000459997 PIN1P1O15428 100 aa16.64■□□□□ 0.25
SRM-202ENST00000459997 RGS10O43665 173 aa16.64■□□□□ 0.25
SRM-202ENST00000459997 FAM90A15PP0C7V4 464 aa16.64■□□□□ 0.25
SRM-202ENST00000459997 FAM90A13PP0C7W8 464 aa16.64■□□□□ 0.25
SRM-202ENST00000459997 FAM90A14PP0C7W9 464 aa16.64■□□□□ 0.25
SRM-202ENST00000459997 FAM90A24PP0C7X0 464 aa16.64■□□□□ 0.25
SRM-202ENST00000459997 RAB7AP51149 207 aa16.64■□□□□ 0.25
SRM-202ENST00000459997 BEAN1Q3B7T3 259 aa16.64■□□□□ 0.25
SRM-202ENST00000459997 C9orf152Q5JTZ5 239 aa16.64■□□□□ 0.25
SRM-202ENST00000459997 SAMD5Q5TGI4 173 aa16.64■□□□□ 0.25
SRM-202ENST00000459997 AWAT2Q6E213 333 aa16.64■□□□□ 0.25
SRM-202ENST00000459997 ZNF497Q6ZNH5 498 aa16.64■□□□□ 0.25
SRM-202ENST00000459997 THNSL2Q86YJ6 484 aa16.64■□□□□ 0.25
SRM-202ENST00000459997 UBALD1Q8TB05 177 aa16.64■□□□□ 0.25
SRM-202ENST00000459997 ARL11Q969Q4 196 aa16.64■□□□□ 0.25
SRM-202ENST00000459997 CCDC90BQ9GZT6 254 aa16.64■□□□□ 0.25
SRM-202ENST00000459997 SPACA1Q9HBV2 294 aa16.64■□□□□ 0.25
SRM-202ENST00000459997 MOB4Q9Y3A3 225 aa16.64■□□□□ 0.25
SRM-202ENST00000459997 PLXNB1O43157 2135 aa16.63■□□□□ 0.25
SRM-202ENST00000459997 C15orf65H3BRN8 121 aa16.63■□□□□ 0.25
SRM-202ENST00000459997 AIPO00170 330 aa16.63■□□□□ 0.25
SRM-202ENST00000459997 SDCBPO00560 298 aaPredicted RBP16.63■□□□□ 0.25
SRM-202ENST00000459997 MAP2K4P45985 399 aa16.63■□□□□ 0.25
SRM-202ENST00000459997 CD83Q01151 205 aa16.63■□□□□ 0.25
SRM-202ENST00000459997 HES1Q14469 280 aa16.63■□□□□ 0.25
SRM-202ENST00000459997 CDH26Q8IXH8 852 aa16.63■□□□□ 0.25
SRM-202ENST00000459997 OR8H3Q8N146 312 aa16.63■□□□□ 0.25
SRM-202ENST00000459997 MRPS24Q96EL2 167 aaKnown RBP16.63■□□□□ 0.25
SRM-202ENST00000459997 MCRIP1C9JLW8 97 aa16.62■□□□□ 0.25
SRM-202ENST00000459997 MT-ND4P03905 459 aa16.62■□□□□ 0.25
SRM-202ENST00000459997 MAPK3P27361 379 aaPredicted RBP16.62■□□□□ 0.25
SRM-202ENST00000459997 RBM48Q5RL73 367 aaKnown RBP16.62■□□□□ 0.25
SRM-202ENST00000459997 THRSPQ92748 146 aa16.62■□□□□ 0.25
SRM-202ENST00000459997 TMED9Q9BVK6 235 aa16.62■□□□□ 0.25
SRM-202ENST00000459997 BANF2Q9H503 90 aa16.62■□□□□ 0.25
SRM-202ENST00000459997 RCC2Q9P258 522 aaKnown RBP16.62■□□□□ 0.25
SRM-202ENST00000459997 HSD17B6O14756 317 aa16.61■□□□□ 0.25
SRM-202ENST00000459997 ORC5O43913 435 aa16.61■□□□□ 0.25
SRM-202ENST00000459997 TMEM11P17152 192 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms