RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 J3KRW8 73 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 SYNGR3O43761 229 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 PDCD6O75340 191 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 HBE1P02100 147 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 PPBPP02775 128 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 GLI4P10075 376 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 ASCL1P50553 236 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 HERV-K104P61576 105 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 ID3Q02535 119 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 SRSF7Q16629 238 aaKnown RBP eCLIP7.32□□□□□ -1.24
VPS50-208ENST00000458707 ZNF674Q2M3X9 581 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 PIGYQ3MUY2 71 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 KHDC3LQ587J8 217 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 TRIM61Q5EBN2 209 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 ZNF343Q6P1L6 599 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 C20orf196Q8IYI0 205 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 HIST3H2BBQ8N257 126 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 DEFB119Q8N690 84 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 CYB561D1Q8N8Q1 229 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 ZFP62Q8NB50 900 aaPredicted RBP7.32□□□□□ -1.24
VPS50-208ENST00000458707 TSTD1Q8NFU3 115 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 OR5R1Q8NH85 324 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 BORCS8Q96FH0 119 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 WFIKKN1Q96NZ8 548 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 RASL10BQ96S79 203 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 NIPSNAP3BQ9BS92 247 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 TPSD1Q9BZJ3 242 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 PCED1AQ9H1Q7 454 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 TMEM242Q9NWH2 141 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 ZNF391Q9UJN7 358 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 DKKL1Q9UK85 242 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 CHCHD2Q9Y6H1 151 aaPredicted RBP7.32□□□□□ -1.24
VPS50-208ENST00000458707 WSB1Q9Y6I7 421 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 CABIN1Q9Y6J0 2220 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 ZNF587BE7ETH6 402 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 K7EP13 123 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 TGOLN2O43493 480 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 TCN2P20062 427 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 GNRHRP30968 328 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 DAZAP2Q15038 168 aaPredicted RBP7.32□□□□□ -1.24
VPS50-208ENST00000458707 SHHQ15465 462 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 MAML2Q8IZL2 1156 aaPredicted RBP7.32□□□□□ -1.24
VPS50-208ENST00000458707 SELENOHQ8IZQ5 122 aaKnown RBP7.32□□□□□ -1.24
VPS50-208ENST00000458707 ZIC4Q8N9L1 334 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 CADM4Q8NFZ8 388 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 OR5C1Q8NGR4 320 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 OR2AE1Q8NHA4 323 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 SIGLEC12Q96PQ1 595 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 RBM24Q9BX46 236 aaKnown RBP7.32□□□□□ -1.24
VPS50-208ENST00000458707 ST3GAL6Q9Y274 331 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 HS3ST3B1Q9Y662 390 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 TGIF2-C20orf24A0A0A6YYL0 155 aa7.31□□□□□ -1.24
VPS50-208ENST00000458707 OR6C6A6NF89 314 aa7.31□□□□□ -1.24
VPS50-208ENST00000458707 NPIPA2E9PIF3 369 aa7.31□□□□□ -1.24
VPS50-208ENST00000458707 NPIPA3F8WFD2 350 aa7.31□□□□□ -1.24
VPS50-208ENST00000458707 SSSCA1O60232 199 aa7.31□□□□□ -1.24
VPS50-208ENST00000458707 GGCTO75223 188 aaKnown RBP7.31□□□□□ -1.24
VPS50-208ENST00000458707 NRASP01111 189 aa7.31□□□□□ -1.24
VPS50-208ENST00000458707 CST2P09228 141 aa7.31□□□□□ -1.24
VPS50-208ENST00000458707 NPSP0C0P6 89 aa7.31□□□□□ -1.24
VPS50-208ENST00000458707 LTBRP36941 435 aa7.31□□□□□ -1.24
VPS50-208ENST00000458707 NOVA1P51513 510 aaKnown RBP7.31□□□□□ -1.24
VPS50-208ENST00000458707 DYNLT3P51808 116 aa7.31□□□□□ -1.24
VPS50-208ENST00000458707 RND2P52198 227 aa7.31□□□□□ -1.24
VPS50-208ENST00000458707 RBM11P57052 281 aaKnown RBP7.31□□□□□ -1.24
VPS50-208ENST00000458707 TLE4Q04727 773 aa7.31□□□□□ -1.24
VPS50-208ENST00000458707 MALLQ13021 153 aa7.31□□□□□ -1.24
VPS50-208ENST00000458707 USF2Q15853 346 aaPredicted RBP7.31□□□□□ -1.24
VPS50-208ENST00000458707 RSPO4Q2I0M5 234 aaPredicted RBP7.31□□□□□ -1.24
VPS50-208ENST00000458707 NMSQ5H8A3 153 aa7.31□□□□□ -1.24
VPS50-208ENST00000458707 ZNF385CQ66K41 422 aaPredicted RBP7.31□□□□□ -1.24
VPS50-208ENST00000458707 CDPF1Q6NVV7 123 aa7.31□□□□□ -1.24
VPS50-208ENST00000458707 UNQ6494/PRO21346Q6UXR6 183 aa7.31□□□□□ -1.24
VPS50-208ENST00000458707 RCC1LQ96I51 464 aaKnown RBP7.31□□□□□ -1.24
VPS50-208ENST00000458707 TECTBQ96PL2 329 aa7.31□□□□□ -1.24
VPS50-208ENST00000458707 TXN2Q99757 166 aa7.31□□□□□ -1.24
VPS50-208ENST00000458707 ULBP2Q9BZM5 246 aa7.31□□□□□ -1.24
VPS50-208ENST00000458707 LOC102723971A0A1B0GUV8 181 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 FAM90A10PA6NDY2 464 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 FAM90A18PA6NE21 464 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 FAM90A16PA6NEW6 464 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 FAM90A20PA6NIJ5 464 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 FAM90A8PA6NJQ4 464 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 FAM90A7PA6NKC0 464 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 FAM90A22PA8MWA6 464 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 FAM90A12PA8MX19 464 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 FAM90A5PA8MXJ8 464 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 FAM90A23PA8MXZ1 464 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 TP53I11O14683 189 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 PHOX2AO14813 284 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 PPP1R2P9O14990 202 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 TIAF1O95411 115 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 TRGC2P03986 189 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 SOD3P08294 240 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 FAM90A15PP0C7V4 464 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 FAM90A13PP0C7W8 464 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 FAM90A14PP0C7W9 464 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 FAM90A24PP0C7X0 464 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 FUT3P21217 361 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 EPHA1P21709 976 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms