RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 FER1L5A0AVI2 2057 aa8.85□□□□□ -0.99
CLIP4-208ENST00000456385 CLEC18AA5D8T8 446 aa8.85□□□□□ -0.99
CLIP4-208ENST00000456385 PDCD6O75340 191 aa8.85□□□□□ -0.99
CLIP4-208ENST00000456385 ZNF737O75373 536 aa8.85□□□□□ -0.99
CLIP4-208ENST00000456385 TCN2P20062 427 aa8.85□□□□□ -0.99
CLIP4-208ENST00000456385 SUMO3P55854 103 aaPredicted RBP8.85□□□□□ -0.99
CLIP4-208ENST00000456385 MALLQ13021 153 aa8.85□□□□□ -0.99
CLIP4-208ENST00000456385 TMEM241Q24JQ0 296 aa8.85□□□□□ -0.99
CLIP4-208ENST00000456385 TMEM240Q5SV17 173 aa8.85□□□□□ -0.99
CLIP4-208ENST00000456385 CALHM1Q8IU99 346 aa8.85□□□□□ -0.99
CLIP4-208ENST00000456385 CLEC18CQ8NCF0 446 aa8.85□□□□□ -0.99
CLIP4-208ENST00000456385 LMX1AQ8TE12 382 aa8.85□□□□□ -0.99
CLIP4-208ENST00000456385 MBD3L1Q8WWY6 194 aa8.85□□□□□ -0.99
CLIP4-208ENST00000456385 ACY3Q96HD9 319 aa8.85□□□□□ -0.99
CLIP4-208ENST00000456385 P2RX4Q99571 388 aa8.85□□□□□ -0.99
CLIP4-208ENST00000456385 CCL28Q9NRJ3 127 aa8.85□□□□□ -0.99
CLIP4-208ENST00000456385 GOLT1BQ9Y3E0 138 aa8.85□□□□□ -0.99
CLIP4-208ENST00000456385 A0A1W2PR80 420 aa8.85□□□□□ -0.99
CLIP4-208ENST00000456385 H7BYZ3 331 aa8.85□□□□□ -0.99
CLIP4-208ENST00000456385 METTL15P1P0C7V9 234 aa8.85□□□□□ -0.99
CLIP4-208ENST00000456385 SHBQ15464 509 aa8.85□□□□□ -0.99
CLIP4-208ENST00000456385 SHHQ15465 462 aa8.85□□□□□ -0.99
CLIP4-208ENST00000456385 TESK1Q15569 626 aa8.85□□□□□ -0.99
CLIP4-208ENST00000456385 DEFB133Q30KQ1 61 aa8.85□□□□□ -0.99
CLIP4-208ENST00000456385 ACTL10Q5JWF8 245 aa8.85□□□□□ -0.99
CLIP4-208ENST00000456385 FAM69BQ5VUD6 431 aa8.85□□□□□ -0.99
CLIP4-208ENST00000456385 Q6ZSR3 168 aa8.85□□□□□ -0.99
CLIP4-208ENST00000456385 CYP2G1PQ6ZSU1 146 aa8.85□□□□□ -0.99
CLIP4-208ENST00000456385 MRGPRGQ86SM5 289 aa8.85□□□□□ -0.99
CLIP4-208ENST00000456385 OR10J5Q8NHC4 309 aa8.85□□□□□ -0.99
CLIP4-208ENST00000456385 SCGB1C1Q8TD33 95 aa8.85□□□□□ -0.99
CLIP4-208ENST00000456385 R3HDM4Q96D70 268 aa8.85□□□□□ -0.99
CLIP4-208ENST00000456385 CRISPLD2Q9H0B8 497 aa8.85□□□□□ -0.99
CLIP4-208ENST00000456385 PLK3Q9H4B4 646 aa8.85□□□□□ -0.99
CLIP4-208ENST00000456385 FKBP11Q9NYL4 201 aa8.85□□□□□ -0.99
CLIP4-208ENST00000456385 PTRH2Q9Y3E5 179 aaKnown RBP8.85□□□□□ -0.99
CLIP4-208ENST00000456385 ARHGAP21Q5T5U3 1957 aa8.84□□□□□ -0.99
CLIP4-208ENST00000456385 COL5A1P20908 1838 aaPredicted RBP8.84□□□□□ -0.99
CLIP4-208ENST00000456385 FREM2Q5SZK8 3169 aa8.84□□□□□ -0.99
CLIP4-208ENST00000456385 MAP1LC3B2A6NCE7 125 aa8.84□□□□□ -0.99
CLIP4-208ENST00000456385 SLC22A20A6NK97 555 aa8.84□□□□□ -0.99
CLIP4-208ENST00000456385 AQP7P3A6NL99 342 aa8.84□□□□□ -0.99
CLIP4-208ENST00000456385 TMEM210A6NLX4 147 aa8.84□□□□□ -0.99
CLIP4-208ENST00000456385 HSPB6O14558 160 aa8.84□□□□□ -0.99
CLIP4-208ENST00000456385 LINC01565O15544 149 aa8.84□□□□□ -0.99
CLIP4-208ENST00000456385 DLEU1O43261 78 aa8.84□□□□□ -0.99
CLIP4-208ENST00000456385 NUPR1O60356 82 aa8.84□□□□□ -0.99
CLIP4-208ENST00000456385 CA3P07451 260 aa8.84□□□□□ -0.99
CLIP4-208ENST00000456385 CST2P09228 141 aa8.84□□□□□ -0.99
CLIP4-208ENST00000456385 PATE4P0C8F1 98 aa8.84□□□□□ -0.99
CLIP4-208ENST00000456385 IAPPP10997 89 aa8.84□□□□□ -0.99
CLIP4-208ENST00000456385 UCP1P25874 307 aa8.84□□□□□ -0.99
CLIP4-208ENST00000456385 MDH2P40926 338 aaKnown RBP8.84□□□□□ -0.99
CLIP4-208ENST00000456385 PTGDSP41222 190 aa8.84□□□□□ -0.99
CLIP4-208ENST00000456385 ARL4DP49703 201 aa8.84□□□□□ -0.99
CLIP4-208ENST00000456385 BLKP51451 505 aa8.84□□□□□ -0.99
CLIP4-208ENST00000456385 FAM3BP58499 235 aaPredicted RBP8.84□□□□□ -0.99
CLIP4-208ENST00000456385 TDRG1Q3Y452 100 aa8.84□□□□□ -0.99
CLIP4-208ENST00000456385 DCAF10Q5QP82 559 aa8.84□□□□□ -0.99
CLIP4-208ENST00000456385 C1orf194Q5T5A4 169 aa8.84□□□□□ -0.99
CLIP4-208ENST00000456385 ZNF774Q6NX45 483 aa8.84□□□□□ -0.99
CLIP4-208ENST00000456385 ZNF705AQ6ZN79 300 aaPredicted RBP8.84□□□□□ -0.99
CLIP4-208ENST00000456385 Q6ZRM9 215 aa8.84□□□□□ -0.99
CLIP4-208ENST00000456385 TGIF2LYQ8IUE0 185 aa8.84□□□□□ -0.99
CLIP4-208ENST00000456385 TMEM256Q8N2U0 113 aa8.84□□□□□ -0.99
CLIP4-208ENST00000456385 GBGT1Q8N5D6 347 aa8.84□□□□□ -0.99
CLIP4-208ENST00000456385 DEFB119Q8N690 84 aa8.84□□□□□ -0.99
CLIP4-208ENST00000456385 ADPRHL1Q8NDY3 354 aa8.84□□□□□ -0.99
CLIP4-208ENST00000456385 GATAD1Q8WUU5 269 aa8.84□□□□□ -0.99
CLIP4-208ENST00000456385 C10orf35Q96D05 121 aa8.84□□□□□ -0.99
CLIP4-208ENST00000456385 ABHD14BQ96IU4 210 aa8.84□□□□□ -0.99
CLIP4-208ENST00000456385 OR5B12Q96R08 314 aa8.84□□□□□ -0.99
CLIP4-208ENST00000456385 MAP1LC3BQ9GZQ8 125 aa8.84□□□□□ -0.99
CLIP4-208ENST00000456385 METTL7AQ9H8H3 244 aa8.84□□□□□ -0.99
CLIP4-208ENST00000456385 PLSCR2Q9NRY7 297 aa8.84□□□□□ -0.99
CLIP4-208ENST00000456385 TLX3O43711 291 aaPredicted RBP8.83□□□□□ -1
CLIP4-208ENST00000456385 NRASP01111 189 aa8.83□□□□□ -1
CLIP4-208ENST00000456385 PCP4P48539 62 aa8.83□□□□□ -1
CLIP4-208ENST00000456385 CNN3Q15417 329 aaKnown RBP8.83□□□□□ -1
CLIP4-208ENST00000456385 TMEM211Q6ICI0 200 aa8.83□□□□□ -1
CLIP4-208ENST00000456385 ASCL4Q6XD76 172 aa8.83□□□□□ -1
CLIP4-208ENST00000456385 WDR5BQ86VZ2 330 aa8.83□□□□□ -1
CLIP4-208ENST00000456385 OR5T1Q8NG75 326 aa8.83□□□□□ -1
CLIP4-208ENST00000456385 SPTSSAQ969W0 71 aa8.83□□□□□ -1
CLIP4-208ENST00000456385 GPR146Q96CH1 333 aa8.83□□□□□ -1
CLIP4-208ENST00000456385 KLHDC7BQ96G42 594 aa8.83□□□□□ -1
CLIP4-208ENST00000456385 ZNF845Q96IR2 970 aaPredicted RBP8.83□□□□□ -1
CLIP4-208ENST00000456385 TRBV11-1A0A0K0K1C0 115 aa8.83□□□□□ -1
CLIP4-208ENST00000456385 LILRA5A6NI73 299 aa8.83□□□□□ -1
CLIP4-208ENST00000456385 KIAA1324LA8MWY0 1029 aaPredicted RBP8.83□□□□□ -1
CLIP4-208ENST00000456385 KBTBD11O94819 623 aa8.83□□□□□ -1
CLIP4-208ENST00000456385 HRASP01112 189 aa8.83□□□□□ -1
CLIP4-208ENST00000456385 IGKV1D-33P01593 117 aa8.83□□□□□ -1
CLIP4-208ENST00000456385 IGKV1-33P01594 117 aa8.83□□□□□ -1
CLIP4-208ENST00000456385 LCATP04180 440 aa8.83□□□□□ -1
CLIP4-208ENST00000456385 OR3A1P47881 315 aa8.83□□□□□ -1
CLIP4-208ENST00000456385 RBM11P57052 281 aaKnown RBP8.83□□□□□ -1
CLIP4-208ENST00000456385 OR1D5P58170 312 aa8.83□□□□□ -1
CLIP4-208ENST00000456385 MEF2BQ02080 365 aaPredicted RBP8.83□□□□□ -1
CLIP4-208ENST00000456385 SLC25A53Q5H9E4 307 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms