RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 TMEM30BQ3MIR4 351 aa14.3□□□□□ -0.12
MSH6-207ENST00000456246 GLIPR1L1Q6UWM5 242 aa14.3□□□□□ -0.12
MSH6-207ENST00000456246 NDUFA11Q86Y39 141 aa14.3□□□□□ -0.12
MSH6-207ENST00000456246 THNSL2Q86YJ6 484 aa14.3□□□□□ -0.12
MSH6-207ENST00000456246 OR8H3Q8N146 312 aa14.3□□□□□ -0.12
MSH6-207ENST00000456246 C11orf44Q8N8P7 122 aa14.3□□□□□ -0.12
MSH6-207ENST00000456246 GHRLQ9UBU3 117 aa14.3□□□□□ -0.12
MSH6-207ENST00000456246 PSG11Q9UQ72 335 aa14.3□□□□□ -0.12
MSH6-207ENST00000456246 MCRIP1C9JLW8 97 aa14.29□□□□□ -0.12
MSH6-207ENST00000456246 ORC5O43913 435 aa14.29□□□□□ -0.12
MSH6-207ENST00000456246 CA11O75493 328 aa14.29□□□□□ -0.12
MSH6-207ENST00000456246 MAS1P04201 325 aa14.29□□□□□ -0.12
MSH6-207ENST00000456246 Q3ZCU0 254 aa14.29□□□□□ -0.12
MSH6-207ENST00000456246 PDLIM3Q53GG5 364 aaPredicted RBP14.29□□□□□ -0.12
MSH6-207ENST00000456246 C6orf141Q5SZD1 244 aa14.29□□□□□ -0.12
MSH6-207ENST00000456246 ZNF497Q6ZNH5 498 aa14.29□□□□□ -0.12
MSH6-207ENST00000456246 OR10X1Q8NGY0 326 aa14.29□□□□□ -0.12
MSH6-207ENST00000456246 OCSTAMPQ9BR26 566 aa14.29□□□□□ -0.12
MSH6-207ENST00000456246 A0A1W2PP11 408 aa14.28□□□□□ -0.12
MSH6-207ENST00000456246 A0A1W2PPK0 400 aa14.28□□□□□ -0.12
MSH6-207ENST00000456246 ANKRD65E5RJM6 399 aa14.28□□□□□ -0.12
MSH6-207ENST00000456246 AIPO00170 330 aa14.28□□□□□ -0.12
MSH6-207ENST00000456246 GLAP06280 429 aa14.28□□□□□ -0.12
MSH6-207ENST00000456246 CD24P25063 80 aa14.28□□□□□ -0.12
MSH6-207ENST00000456246 LTC4SQ16873 150 aa14.28□□□□□ -0.12
MSH6-207ENST00000456246 TRAT1Q6PIZ9 186 aa14.28□□□□□ -0.12
MSH6-207ENST00000456246 C8orf31Q8N9H6 132 aa14.28□□□□□ -0.12
MSH6-207ENST00000456246 OR4F17Q8NGA8 305 aa14.28□□□□□ -0.12
MSH6-207ENST00000456246 RFESDQ8TAC1 157 aa14.28□□□□□ -0.12
MSH6-207ENST00000456246 ARL11Q969Q4 196 aa14.28□□□□□ -0.12
MSH6-207ENST00000456246 OR4F4Q96R69 305 aa14.28□□□□□ -0.12
MSH6-207ENST00000456246 CST11Q9H112 138 aa14.28□□□□□ -0.12
MSH6-207ENST00000456246 ZNF581Q9P0T4 197 aa14.28□□□□□ -0.12
MSH6-207ENST00000456246 MOB4Q9Y3A3 225 aa14.28□□□□□ -0.12
MSH6-207ENST00000456246 FAM90A9PA6NNJ1 464 aa14.27□□□□□ -0.13
MSH6-207ENST00000456246 PIN1P1O15428 100 aa14.27□□□□□ -0.13
MSH6-207ENST00000456246 MT-ND4P03905 459 aa14.27□□□□□ -0.13
MSH6-207ENST00000456246 UBBP0CG47 229 aa14.27□□□□□ -0.13
MSH6-207ENST00000456246 CD28P10747 220 aa14.27□□□□□ -0.13
MSH6-207ENST00000456246 MGMTP16455 207 aa14.27□□□□□ -0.13
MSH6-207ENST00000456246 GNG10P50151 68 aa14.27□□□□□ -0.13
MSH6-207ENST00000456246 GPR50Q13585 617 aa14.27□□□□□ -0.13
MSH6-207ENST00000456246 SPHARQ15513 63 aa14.27□□□□□ -0.13
MSH6-207ENST00000456246 C6orf183Q5T699 404 aa14.27□□□□□ -0.13
MSH6-207ENST00000456246 LYPD6Q86Y78 171 aa14.27□□□□□ -0.13
MSH6-207ENST00000456246 PHYHIPQ92561 330 aa14.27□□□□□ -0.13
MSH6-207ENST00000456246 LEAP2Q969E1 77 aa14.27□□□□□ -0.13
MSH6-207ENST00000456246 OR5M11Q96RB7 305 aa14.27□□□□□ -0.13
MSH6-207ENST00000456246 VCX3BQ9H321 246 aa14.27□□□□□ -0.13
MSH6-207ENST00000456246 TPRKBQ9Y3C4 175 aa14.27□□□□□ -0.13
MSH6-207ENST00000456246 A0A1W2PPI3 338 aa14.26□□□□□ -0.13
MSH6-207ENST00000456246 PTGES3LE9PB15 166 aa14.26□□□□□ -0.13
MSH6-207ENST00000456246 C15orf65H3BRN8 121 aa14.26□□□□□ -0.13
MSH6-207ENST00000456246 SDCBPO00560 298 aaPredicted RBP14.26□□□□□ -0.13
MSH6-207ENST00000456246 CRTAPO75718 401 aaPredicted RBP14.26□□□□□ -0.13
MSH6-207ENST00000456246 IL3RAP26951 378 aa14.26□□□□□ -0.13
MSH6-207ENST00000456246 GABPB1Q06547 395 aaPredicted RBP14.26□□□□□ -0.13
MSH6-207ENST00000456246 ABCA11PQ4W5N1 156 aa14.26□□□□□ -0.13
MSH6-207ENST00000456246 ACSM3Q53FZ2 586 aa14.26□□□□□ -0.13
MSH6-207ENST00000456246 UTF1Q5T230 341 aa14.26□□□□□ -0.13
MSH6-207ENST00000456246 RAB12Q6IQ22 244 aa14.26□□□□□ -0.13
MSH6-207ENST00000456246 Q6ZS46 218 aa14.26□□□□□ -0.13
MSH6-207ENST00000456246 LINC00311Q8N616 119 aa14.26□□□□□ -0.13
MSH6-207ENST00000456246 OR56B4Q8NH76 319 aa14.26□□□□□ -0.13
MSH6-207ENST00000456246 Q96M66 194 aa14.26□□□□□ -0.13
MSH6-207ENST00000456246 SELENOIQ9C0D9 397 aa14.26□□□□□ -0.13
MSH6-207ENST00000456246 GFOD1Q9NXC2 390 aa14.26□□□□□ -0.13
MSH6-207ENST00000456246 ETAA1Q9NY74 926 aa14.26□□□□□ -0.13
MSH6-207ENST00000456246 NKX1-2Q9UD57 310 aaPredicted RBP14.26□□□□□ -0.13
MSH6-207ENST00000456246 TRAPPC2LQ9UL33 140 aa14.26□□□□□ -0.13
MSH6-207ENST00000456246 TRAV39A0A0B4J263 110 aa14.25□□□□□ -0.13
MSH6-207ENST00000456246 SPINT2O43291 252 aa14.25□□□□□ -0.13
MSH6-207ENST00000456246 IGHV3-7P01780 117 aa14.25□□□□□ -0.13
MSH6-207ENST00000456246 LPLP06858 475 aa14.25□□□□□ -0.13
MSH6-207ENST00000456246 FUT3P21217 361 aa14.25□□□□□ -0.13
MSH6-207ENST00000456246 AQP4P55087 323 aa14.25□□□□□ -0.13
MSH6-207ENST00000456246 SLC35A2P78381 396 aa14.25□□□□□ -0.13
MSH6-207ENST00000456246 ZNF816Q0VGE8 651 aaPredicted RBP14.25□□□□□ -0.13
MSH6-207ENST00000456246 NSUN5P1Q3KNT7 163 aa14.25□□□□□ -0.13
MSH6-207ENST00000456246 TMEM95Q3KNT9 176 aa14.25□□□□□ -0.13
MSH6-207ENST00000456246 GLT8D1Q68CQ7 371 aa14.25□□□□□ -0.13
MSH6-207ENST00000456246 UNQ9370/PRO34162Q6UXP9 181 aa14.25□□□□□ -0.13
MSH6-207ENST00000456246 CENPVQ7Z7K6 275 aaPredicted RBP14.25□□□□□ -0.13
MSH6-207ENST00000456246 ZNF554Q86TJ5 538 aa14.25□□□□□ -0.13
MSH6-207ENST00000456246 GAPTQ8N292 157 aa14.25□□□□□ -0.13
MSH6-207ENST00000456246 OR5AU1Q8NGC0 362 aa14.25□□□□□ -0.13
MSH6-207ENST00000456246 CITED2Q99967 270 aaPredicted RBP14.25□□□□□ -0.13
MSH6-207ENST00000456246 LSM2Q9Y333 95 aaKnown RBP14.25□□□□□ -0.13
MSH6-207ENST00000456246 PEX16Q9Y5Y5 336 aa14.25□□□□□ -0.13
MSH6-207ENST00000456246 H0YHG0 523 aa14.24□□□□□ -0.13
MSH6-207ENST00000456246 CCRL2O00421 344 aa14.24□□□□□ -0.13
MSH6-207ENST00000456246 HSD17B6O14756 317 aa14.24□□□□□ -0.13
MSH6-207ENST00000456246 FGF16O43320 207 aa14.24□□□□□ -0.13
MSH6-207ENST00000456246 SC5DO75845 299 aa14.24□□□□□ -0.13
MSH6-207ENST00000456246 GAPDHP04406 335 aaKnown RBP14.24□□□□□ -0.13
MSH6-207ENST00000456246 SNRNP70P08621 437 aaKnown RBP14.24□□□□□ -0.13
MSH6-207ENST00000456246 HES1Q14469 280 aa14.24□□□□□ -0.13
MSH6-207ENST00000456246 MED22Q15528 200 aa14.24□□□□□ -0.13
MSH6-207ENST00000456246 SYT6Q5T7P8 510 aaPredicted RBP14.24□□□□□ -0.13
MSH6-207ENST00000456246 DRAM1Q8N682 238 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms