RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 APCSP02743 223 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 KISS1Q15726 138 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 HLA-DRB5Q30154 266 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 FAM166AQ6J272 317 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 MARS2Q96GW9 593 aaKnown RBP4.63□□□□□ -1.67
CSMD3-204ENST00000455883 TBL2Q9Y4P3 447 aaKnown RBP4.63□□□□□ -1.67
CSMD3-204ENST00000455883 THSD7AQ9UPZ6 1657 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 TRGC2P03986 189 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 GDF1P27539 372 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 UBE2L3P68036 154 aaKnown RBP4.63□□□□□ -1.67
CSMD3-204ENST00000455883 ZNF117Q03924 483 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 POC1AQ8NBT0 407 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 OR10G9Q8NGN4 311 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 OR10G7Q8NGN6 311 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 ABHD3Q8WU67 409 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 UBE2FQ969M7 185 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 ALKBH7Q9BT30 221 aaPredicted RBP4.63□□□□□ -1.67
CSMD3-204ENST00000455883 CBLN4Q9NTU7 201 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 LAMTOR2Q9Y2Q5 125 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 NUP210LQ5VU65 1888 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 PRRG2O14669 202 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 IL2RAP01589 272 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 FAM234AQ9H0X4 552 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 ZNF665Q9H7R5 613 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 B9D1Q9UPM9 204 aa4.63□□□□□ -1.67
CSMD3-204ENST00000455883 A0A0A6YYD5 115 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 A0A1B0GV50 99 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 A0A1B0GW64 132 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 PYCARD-AS1I3L0S3 204 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 RBFOX2O43251 390 aaKnown RBP eCLIP4.62□□□□□ -1.67
CSMD3-204ENST00000455883 ALOX12BO75342 701 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 PSG9Q00887 426 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 SIGLEC14Q08ET2 396 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 ACKR1Q16570 336 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 PLA2G12AQ9BZM1 189 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 WDR54Q9H977 334 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 AP5S1Q9NUS5 200 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 LMO7DNF2Z398 122 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 ONECUT2O95948 504 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 IFITM2Q01629 132 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 OR1L8Q8NGR8 309 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 GPBAR1Q8TDU6 330 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 SEC22AQ96IW7 307 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 ST6GAL2Q96JF0 529 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 PDFQ9HBH1 243 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 TAS2R4Q9NYW5 299 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 MRPL15Q9P015 296 aaKnown RBP4.62□□□□□ -1.67
CSMD3-204ENST00000455883 HKR1P10072 659 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 COL8A1P27658 744 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 LGALS7P47929 136 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 PPP2CAP67775 309 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 MYPOPQ86VE0 399 aaPredicted RBP4.62□□□□□ -1.67
CSMD3-204ENST00000455883 ATOH1Q92858 354 aaPredicted RBP4.62□□□□□ -1.67
CSMD3-204ENST00000455883 ULBP3Q9BZM4 244 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 C7orf77A4D0Y5 90 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 PIAS2O75928 621 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 ID4P47928 161 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 NUBP1P53384 320 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 FOXA1P55317 472 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 PPIAP62937 165 aaKnown RBP4.62□□□□□ -1.67
CSMD3-204ENST00000455883 DNM1P46Q6ZS02 220 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 FAM131CQ96AQ9 280 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 KCNS1Q96KK3 526 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 DERL1Q9BUN8 251 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 SCNM1Q9BWG6 230 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 WNT6Q9Y6F9 365 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 C3orf85A0A1B0GTC6 90 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 ADAP1O75689 374 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 CA1P00915 261 aaPredicted RBP4.62□□□□□ -1.67
CSMD3-204ENST00000455883 B2MP61769 119 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 ZNF146Q15072 292 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 C10orf126Q8N4M7 172 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 TMEM116Q8NCL8 245 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 SGMS2Q8NHU3 365 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 MOB3AQ96BX8 217 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 DDA1Q9BW61 102 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 MIXL1Q9H2W2 232 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 MBNL1Q9NR56 388 aaKnown RBP4.62□□□□□ -1.67
CSMD3-204ENST00000455883 RCC2Q9P258 522 aaKnown RBP4.62□□□□□ -1.67
CSMD3-204ENST00000455883 LIPGQ9Y5X9 500 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 FAM72CH0Y354 149 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 ZIC2O95409 532 aaPredicted RBP4.62□□□□□ -1.67
CSMD3-204ENST00000455883 TIMP1P01033 207 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 OR1D5P58170 312 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 ZNF816Q0VGE8 651 aaPredicted RBP4.62□□□□□ -1.67
CSMD3-204ENST00000455883 IRF3Q14653 427 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 ACSF3Q4G176 576 aaPredicted RBP4.62□□□□□ -1.67
CSMD3-204ENST00000455883 FAM72AQ5TYM5 149 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 FAM72DQ6L9T8 149 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 FAM72BQ86X60 149 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 TMEM123Q8N131 208 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 CADM4Q8NFZ8 388 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 OR10G3Q8NGC4 313 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 TMEM255BQ8WV15 326 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 C4orf45Q96LM5 186 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 RASL11BQ9BPW5 248 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 WRAP73Q9P2S5 460 aaPredicted RBP4.62□□□□□ -1.67
CSMD3-204ENST00000455883 HIKESHIQ53FT3 197 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 ATP5L2Q7Z4Y8 100 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 C2orf73Q8N5S3 287 aaPredicted RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms