RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 C4orf3Q8WVX3 66 aa6.31□□□□□ -1.4
NIF3L1-209ENST00000454952 EME1Q96AY2 570 aa6.31□□□□□ -1.4
NIF3L1-209ENST00000454952 GPER1Q99527 375 aa6.31□□□□□ -1.4
NIF3L1-209ENST00000454952 CIB1Q99828 191 aa6.31□□□□□ -1.4
NIF3L1-209ENST00000454952 RASL11BQ9BPW5 248 aa6.31□□□□□ -1.4
NIF3L1-209ENST00000454952 ABCG5Q9H222 651 aa6.31□□□□□ -1.4
NIF3L1-209ENST00000454952 PPIL3Q9H2H8 161 aaKnown RBP6.31□□□□□ -1.4
NIF3L1-209ENST00000454952 RIBC2Q9H4K1 309 aa6.31□□□□□ -1.4
NIF3L1-209ENST00000454952 DCLRE1BQ9H816 532 aa6.31□□□□□ -1.4
NIF3L1-209ENST00000454952 AP4S1Q9Y587 144 aa6.31□□□□□ -1.4
NIF3L1-209ENST00000454952 ORC6Q9Y5N6 252 aa6.31□□□□□ -1.4
NIF3L1-209ENST00000454952 KMT2CQ8NEZ4 4911 aaKnown RBP6.3□□□□□ -1.4
NIF3L1-209ENST00000454952 TRAV24A0A0B4J272 114 aa6.3□□□□□ -1.4
NIF3L1-209ENST00000454952 IGHV1-3A0A0C4DH29 117 aa6.3□□□□□ -1.4
NIF3L1-209ENST00000454952 TMEM30CPA0ZSE6 113 aa6.3□□□□□ -1.4
NIF3L1-209ENST00000454952 OR4C45A6NMZ5 311 aa6.3□□□□□ -1.4
NIF3L1-209ENST00000454952 MOSP00540 346 aa6.3□□□□□ -1.4
NIF3L1-209ENST00000454952 IGHG4P01861 327 aa6.3□□□□□ -1.4
NIF3L1-209ENST00000454952 OR8U8P0C7N1 319 aa6.3□□□□□ -1.4
NIF3L1-209ENST00000454952 RAB3AP20336 220 aa6.3□□□□□ -1.4
NIF3L1-209ENST00000454952 CD1BP29016 333 aa6.3□□□□□ -1.4
NIF3L1-209ENST00000454952 GNG10P50151 68 aa6.3□□□□□ -1.4
NIF3L1-209ENST00000454952 LUMP51884 338 aaPredicted RBP6.3□□□□□ -1.4
NIF3L1-209ENST00000454952 ZP1P60852 638 aa6.3□□□□□ -1.4
NIF3L1-209ENST00000454952 ALKBH1Q13686 389 aaKnown RBP6.3□□□□□ -1.4
NIF3L1-209ENST00000454952 RSU1Q15404 277 aa6.3□□□□□ -1.4
NIF3L1-209ENST00000454952 LTC4SQ16873 150 aa6.3□□□□□ -1.4
NIF3L1-209ENST00000454952 SLC25A30Q5SVS4 291 aa6.3□□□□□ -1.4
NIF3L1-209ENST00000454952 RSBN1Q5VWQ0 802 aaPredicted RBP6.3□□□□□ -1.4
NIF3L1-209ENST00000454952 LCNL1Q6ZST4 164 aa6.3□□□□□ -1.4
NIF3L1-209ENST00000454952 C18orf65Q6ZTR6 163 aa6.3□□□□□ -1.4
NIF3L1-209ENST00000454952 LINC00596Q86U02 117 aa6.3□□□□□ -1.4
NIF3L1-209ENST00000454952 SYS1Q8N2H4 156 aa6.3□□□□□ -1.4
NIF3L1-209ENST00000454952 LINC00311Q8N616 119 aa6.3□□□□□ -1.4
NIF3L1-209ENST00000454952 OR13A1Q8NGR1 328 aa6.3□□□□□ -1.4
NIF3L1-209ENST00000454952 MRGPRDQ8TDS7 321 aa6.3□□□□□ -1.4
NIF3L1-209ENST00000454952 LEAP2Q969E1 77 aa6.3□□□□□ -1.4
NIF3L1-209ENST00000454952 RNFT2Q96EX2 444 aa6.3□□□□□ -1.4
NIF3L1-209ENST00000454952 SPACA5Q96QH8 159 aa6.3□□□□□ -1.4
NIF3L1-209ENST00000454952 NR1H4Q96RI1 486 aaPredicted RBP6.3□□□□□ -1.4
NIF3L1-209ENST00000454952 IFT22Q9H7X7 185 aa6.3□□□□□ -1.4
NIF3L1-209ENST00000454952 PAK1IP1Q9NWT1 392 aaPredicted RBP6.3□□□□□ -1.4
NIF3L1-209ENST00000454952 LINC00527Q9UJ94 153 aa6.3□□□□□ -1.4
NIF3L1-209ENST00000454952 DHDHQ9UQ10 334 aa6.3□□□□□ -1.4
NIF3L1-209ENST00000454952 ZNF256Q9Y2P7 627 aaPredicted RBP6.3□□□□□ -1.4
NIF3L1-209ENST00000454952 SMAD5-AS1Q9Y6J3 95 aa6.3□□□□□ -1.4
NIF3L1-209ENST00000454952 J3QLW9 94 aa6.29□□□□□ -1.4
NIF3L1-209ENST00000454952 J3QRE1 110 aa6.29□□□□□ -1.4
NIF3L1-209ENST00000454952 SDCBPO00560 298 aaPredicted RBP6.29□□□□□ -1.4
NIF3L1-209ENST00000454952 IGHV3-7P01780 117 aa6.29□□□□□ -1.4
NIF3L1-209ENST00000454952 CD2P06729 351 aa6.29□□□□□ -1.4
NIF3L1-209ENST00000454952 ZNF19P17023 458 aa6.29□□□□□ -1.4
NIF3L1-209ENST00000454952 SOX6P35712 828 aa6.29□□□□□ -1.4
NIF3L1-209ENST00000454952 RASSF2P50749 326 aa6.29□□□□□ -1.4
NIF3L1-209ENST00000454952 NANOS3P60323 173 aaKnown RBP6.29□□□□□ -1.4
NIF3L1-209ENST00000454952 SNRPGP62308 76 aaKnown RBP6.29□□□□□ -1.4
NIF3L1-209ENST00000454952 FHL3Q13643 280 aa6.29□□□□□ -1.4
NIF3L1-209ENST00000454952 DOC2BQ14184 412 aa6.29□□□□□ -1.4
NIF3L1-209ENST00000454952 FAM27D1Q5T7N8 215 aa6.29□□□□□ -1.4
NIF3L1-209ENST00000454952 TMEM65Q6PI78 240 aa6.29□□□□□ -1.4
NIF3L1-209ENST00000454952 STX19Q8N4C7 294 aa6.29□□□□□ -1.4
NIF3L1-209ENST00000454952 Q8N6K4 173 aa6.29□□□□□ -1.4
NIF3L1-209ENST00000454952 Q8N9W7 124 aa6.29□□□□□ -1.4
NIF3L1-209ENST00000454952 OR51A4Q8NGJ6 313 aa6.29□□□□□ -1.4
NIF3L1-209ENST00000454952 OR5AK2Q8NH90 309 aa6.29□□□□□ -1.4
NIF3L1-209ENST00000454952 RFESDQ8TAC1 157 aa6.29□□□□□ -1.4
NIF3L1-209ENST00000454952 MUC7Q8TAX7 377 aa6.29□□□□□ -1.4
NIF3L1-209ENST00000454952 TNFAIP8L1Q8WVP5 186 aa6.29□□□□□ -1.4
NIF3L1-209ENST00000454952 TSEN15Q8WW01 171 aaKnown RBP6.29□□□□□ -1.4
NIF3L1-209ENST00000454952 PELI1Q96FA3 418 aa6.29□□□□□ -1.4
NIF3L1-209ENST00000454952 CENPNQ96H22 339 aaPredicted RBP6.29□□□□□ -1.4
NIF3L1-209ENST00000454952 C4orf36Q96KX1 117 aa6.29□□□□□ -1.4
NIF3L1-209ENST00000454952 DUX3Q96PT4 197 aa6.29□□□□□ -1.4
NIF3L1-209ENST00000454952 PRR25Q96S07 402 aa6.29□□□□□ -1.4
NIF3L1-209ENST00000454952 S1PR3Q99500 378 aa6.29□□□□□ -1.4
NIF3L1-209ENST00000454952 S100A13Q99584 98 aa6.29□□□□□ -1.4
NIF3L1-209ENST00000454952 DPCDQ9BVM2 203 aaPredicted RBP6.29□□□□□ -1.4
NIF3L1-209ENST00000454952 JAM3Q9BX67 310 aa6.29□□□□□ -1.4
NIF3L1-209ENST00000454952 FAM192AQ9GZU8 254 aa6.29□□□□□ -1.4
NIF3L1-209ENST00000454952 SPACA1Q9HBV2 294 aa6.29□□□□□ -1.4
NIF3L1-209ENST00000454952 SPINT2O43291 252 aa6.28□□□□□ -1.4
NIF3L1-209ENST00000454952 ORC5O43913 435 aa6.28□□□□□ -1.4
NIF3L1-209ENST00000454952 ZNF780AO75290 641 aaPredicted RBP6.28□□□□□ -1.4
NIF3L1-209ENST00000454952 OR7C1O76099 320 aaPredicted RBP6.28□□□□□ -1.4
NIF3L1-209ENST00000454952 LY86O95711 162 aa6.28□□□□□ -1.4
NIF3L1-209ENST00000454952 FADS2O95864 444 aaKnown RBP6.28□□□□□ -1.4
NIF3L1-209ENST00000454952 CSTBP04080 98 aaKnown RBP6.28□□□□□ -1.4
NIF3L1-209ENST00000454952 IGF1P05019 195 aa6.28□□□□□ -1.4
NIF3L1-209ENST00000454952 SSTR5P35346 364 aa6.28□□□□□ -1.4
NIF3L1-209ENST00000454952 GBX2P52951 348 aaPredicted RBP6.28□□□□□ -1.4
NIF3L1-209ENST00000454952 PPP3R1P63098 170 aa6.28□□□□□ -1.4
NIF3L1-209ENST00000454952 DIAPH2-AS1Q14236 149 aa6.28□□□□□ -1.4
NIF3L1-209ENST00000454952 GALEQ14376 348 aa6.28□□□□□ -1.4
NIF3L1-209ENST00000454952 GPR176Q14439 515 aa6.28□□□□□ -1.4
NIF3L1-209ENST00000454952 ZSCAN26Q16670 478 aa6.28□□□□□ -1.4
NIF3L1-209ENST00000454952 MPV17LQ2QL34 196 aa6.28□□□□□ -1.4
NIF3L1-209ENST00000454952 DEFB136Q30KP8 78 aa6.28□□□□□ -1.4
NIF3L1-209ENST00000454952 ZNF260Q3ZCT1 412 aa6.28□□□□□ -1.4
NIF3L1-209ENST00000454952 NHLRC3Q5JS37 347 aa6.28□□□□□ -1.4
NIF3L1-209ENST00000454952 NKAPLQ5M9Q1 402 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms