RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 APLNRP35414 380 aa11.98□□□□□ -0.49
UBE2D3-210ENST00000453744 FUT6P51993 359 aa11.98□□□□□ -0.49
UBE2D3-210ENST00000453744 SPINK9Q5DT21 86 aa11.98□□□□□ -0.49
UBE2D3-210ENST00000453744 ZNF574Q6ZN55 896 aaPredicted RBP11.98□□□□□ -0.49
UBE2D3-210ENST00000453744 OR2M3Q8NG83 312 aa11.98□□□□□ -0.49
UBE2D3-210ENST00000453744 OR56B2PQ8NGI1 322 aa11.98□□□□□ -0.49
UBE2D3-210ENST00000453744 MSL2Q9HCI7 577 aa11.98□□□□□ -0.49
UBE2D3-210ENST00000453744 Q9N2K0 584 aa11.98□□□□□ -0.49
UBE2D3-210ENST00000453744 PROB1E7EW31 1015 aa11.98□□□□□ -0.49
UBE2D3-210ENST00000453744 CYB5R3P00387 301 aaPredicted RBP11.98□□□□□ -0.49
UBE2D3-210ENST00000453744 IL24Q13007 206 aa11.98□□□□□ -0.49
UBE2D3-210ENST00000453744 TM2D1Q9BX74 207 aa11.98□□□□□ -0.49
UBE2D3-210ENST00000453744 SMDT1Q9H4I9 107 aa11.98□□□□□ -0.49
UBE2D3-210ENST00000453744 TRAPPC2LQ9UL33 140 aa11.98□□□□□ -0.49
UBE2D3-210ENST00000453744 ATRXP46100 2492 aa11.98□□□□□ -0.49
UBE2D3-210ENST00000453744 A0A1W2PNV4 684 aa11.98□□□□□ -0.49
UBE2D3-210ENST00000453744 FAM3BP58499 235 aaPredicted RBP11.98□□□□□ -0.49
UBE2D3-210ENST00000453744 RAB4BP61018 213 aa11.98□□□□□ -0.49
UBE2D3-210ENST00000453744 ZNF92Q03936 586 aa11.98□□□□□ -0.49
UBE2D3-210ENST00000453744 DMRTC2Q8IXT2 367 aaPredicted RBP11.98□□□□□ -0.49
UBE2D3-210ENST00000453744 ZNF808Q8N4W9 903 aaPredicted RBP11.98□□□□□ -0.49
UBE2D3-210ENST00000453744 ABHD5Q8WTS1 349 aa11.98□□□□□ -0.49
UBE2D3-210ENST00000453744 ADGRG7Q96K78 797 aa11.98□□□□□ -0.49
UBE2D3-210ENST00000453744 ZNF488Q96MN9 340 aa11.98□□□□□ -0.49
UBE2D3-210ENST00000453744 SAMD10Q9BYL1 202 aa11.98□□□□□ -0.49
UBE2D3-210ENST00000453744 A0A0U1RQV5 110 aa11.97□□□□□ -0.49
UBE2D3-210ENST00000453744 KIR2DS1A0A191URI9 304 aa11.97□□□□□ -0.49
UBE2D3-210ENST00000453744 PSG2P11465 335 aa11.97□□□□□ -0.49
UBE2D3-210ENST00000453744 KIR2DS4P43632 304 aa11.97□□□□□ -0.49
UBE2D3-210ENST00000453744 TAS2R60P59551 318 aa11.97□□□□□ -0.49
UBE2D3-210ENST00000453744 KIR2DS1Q14954 304 aa11.97□□□□□ -0.49
UBE2D3-210ENST00000453744 SELENOHQ8IZQ5 122 aaKnown RBP11.97□□□□□ -0.49
UBE2D3-210ENST00000453744 KDF1Q8NAX2 398 aaPredicted RBP11.97□□□□□ -0.49
UBE2D3-210ENST00000453744 CLDND2Q8NHS1 167 aa11.97□□□□□ -0.49
UBE2D3-210ENST00000453744 GPR27Q9NS67 375 aa11.97□□□□□ -0.49
UBE2D3-210ENST00000453744 CLEC18AA5D8T8 446 aa11.97□□□□□ -0.49
UBE2D3-210ENST00000453744 C3orf80F5H4A9 247 aa11.97□□□□□ -0.49
UBE2D3-210ENST00000453744 KRASP01116 189 aa11.97□□□□□ -0.49
UBE2D3-210ENST00000453744 MBP02144 154 aa11.97□□□□□ -0.49
UBE2D3-210ENST00000453744 BCL3P20749 454 aa11.97□□□□□ -0.49
UBE2D3-210ENST00000453744 COL10A1Q03692 680 aa11.97□□□□□ -0.49
UBE2D3-210ENST00000453744 LTC4SQ16873 150 aa11.97□□□□□ -0.49
UBE2D3-210ENST00000453744 ZNF506Q5JVG8 444 aa11.97□□□□□ -0.49
UBE2D3-210ENST00000453744 SPSB3Q6PJ21 355 aa11.97□□□□□ -0.49
UBE2D3-210ENST00000453744 CLEC18CQ8NCF0 446 aa11.97□□□□□ -0.49
UBE2D3-210ENST00000453744 HLA-CQ95604 372 aa11.97□□□□□ -0.49
UBE2D3-210ENST00000453744 CDCA3Q99618 268 aaPredicted RBP11.97□□□□□ -0.49
UBE2D3-210ENST00000453744 DDA1Q9BW61 102 aa11.97□□□□□ -0.49
UBE2D3-210ENST00000453744 RBKSQ9H477 322 aa11.97□□□□□ -0.49
UBE2D3-210ENST00000453744 VSIRQ9H7M9 311 aa11.97□□□□□ -0.49
UBE2D3-210ENST00000453744 IFITM10A6NMD0 228 aa11.97□□□□□ -0.49
UBE2D3-210ENST00000453744 ZNF732B4DXR9 585 aa11.97□□□□□ -0.49
UBE2D3-210ENST00000453744 PNRC1Q12796 327 aaPredicted RBP11.97□□□□□ -0.49
UBE2D3-210ENST00000453744 ENDOGQ14249 297 aaKnown RBP11.97□□□□□ -0.49
UBE2D3-210ENST00000453744 FAM78BQ5VT40 261 aa11.97□□□□□ -0.49
UBE2D3-210ENST00000453744 KCNIP4Q6PIL6 250 aa11.97□□□□□ -0.49
UBE2D3-210ENST00000453744 C1QL4Q86Z23 238 aa11.97□□□□□ -0.49
UBE2D3-210ENST00000453744 OR1P1Q8NH06 330 aa11.97□□□□□ -0.49
UBE2D3-210ENST00000453744 GTF3AQ92664 365 aaKnown RBP11.97□□□□□ -0.49
UBE2D3-210ENST00000453744 C18orf12Q96KH6 178 aa11.97□□□□□ -0.49
UBE2D3-210ENST00000453744 RRP8O43159 456 aaKnown RBP11.96□□□□□ -0.49
UBE2D3-210ENST00000453744 EGR1P18146 543 aa11.96□□□□□ -0.49
UBE2D3-210ENST00000453744 PMELP40967 661 aa11.96□□□□□ -0.49
UBE2D3-210ENST00000453744 PRDM13Q9H4Q3 707 aa11.96□□□□□ -0.49
UBE2D3-210ENST00000453744 C5orf49A4QMS7 147 aa11.96□□□□□ -0.49
UBE2D3-210ENST00000453744 EPOPA6NHQ4 379 aa11.96□□□□□ -0.49
UBE2D3-210ENST00000453744 C9J4A7 227 aa11.96□□□□□ -0.49
UBE2D3-210ENST00000453744 P04436 131 aa11.96□□□□□ -0.49
UBE2D3-210ENST00000453744 SLC10A1Q14973 349 aa11.96□□□□□ -0.49
UBE2D3-210ENST00000453744 OR4X1Q8NH49 305 aa11.96□□□□□ -0.49
UBE2D3-210ENST00000453744 FOXB1Q99853 325 aa11.96□□□□□ -0.49
UBE2D3-210ENST00000453744 PCDH15Q96QU1 1955 aa11.96□□□□□ -0.49
UBE2D3-210ENST00000453744 VAMP5O95183 116 aa11.96□□□□□ -0.5
UBE2D3-210ENST00000453744 OTX2P32243 289 aa11.96□□□□□ -0.5
UBE2D3-210ENST00000453744 RAB35Q15286 201 aa11.96□□□□□ -0.5
UBE2D3-210ENST00000453744 TOMM20LQ6UXN7 152 aa11.96□□□□□ -0.5
UBE2D3-210ENST00000453744 CALHM1Q8IU99 346 aa11.96□□□□□ -0.5
UBE2D3-210ENST00000453744 ANGPTL4Q9BY76 406 aa11.96□□□□□ -0.5
UBE2D3-210ENST00000453744 PNRC2Q9NPJ4 139 aaKnown RBP11.96□□□□□ -0.5
UBE2D3-210ENST00000453744 VAX2Q9UIW0 290 aa11.96□□□□□ -0.5
UBE2D3-210ENST00000453744 IGKV1-12A0A0C4DH73 117 aa11.95□□□□□ -0.5
UBE2D3-210ENST00000453744 B4DEV8 164 aa11.95□□□□□ -0.5
UBE2D3-210ENST00000453744 SIRPB1O00241 398 aa11.95□□□□□ -0.5
UBE2D3-210ENST00000453744 SYNGR2O43760 224 aa11.95□□□□□ -0.5
UBE2D3-210ENST00000453744 TIAF1O95411 115 aa11.95□□□□□ -0.5
UBE2D3-210ENST00000453744 IGKV1D-12P01611 117 aa11.95□□□□□ -0.5
UBE2D3-210ENST00000453744 CRYAAP02489 173 aa11.95□□□□□ -0.5
UBE2D3-210ENST00000453744 AKIRIN1Q9H9L7 192 aaPredicted RBP11.95□□□□□ -0.5
UBE2D3-210ENST00000453744 IL36RNQ9UBH0 155 aa11.95□□□□□ -0.5
UBE2D3-210ENST00000453744 LOC102723971A0A1B0GUV8 181 aa11.95□□□□□ -0.5
UBE2D3-210ENST00000453744 A0A1W2PPV4 95 aa11.95□□□□□ -0.5
UBE2D3-210ENST00000453744 TGOLN2O43493 480 aa11.95□□□□□ -0.5
UBE2D3-210ENST00000453744 MDH2P40926 338 aaKnown RBP11.95□□□□□ -0.5
UBE2D3-210ENST00000453744 RBM11P57052 281 aaKnown RBP11.95□□□□□ -0.5
UBE2D3-210ENST00000453744 IGKV1-27A0A075B6S5 117 aa11.95□□□□□ -0.5
UBE2D3-210ENST00000453744 IGKV1D-13A0A0B4J2D9 117 aa11.95□□□□□ -0.5
UBE2D3-210ENST00000453744 PIAS2O75928 621 aa11.95□□□□□ -0.5
UBE2D3-210ENST00000453744 CD55P08174 381 aa11.95□□□□□ -0.5
UBE2D3-210ENST00000453744 IGKV1-13P0DP09 117 aa11.95□□□□□ -0.5
UBE2D3-210ENST00000453744 CCL3P10147 92 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms