RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 OPN4Q9UHM6 478 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 TMEM235A6NFC5 223 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 ORC5O43913 435 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 HLA-DQB1P01920 261 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 ZNF728P0DKX0 622 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 ZNF16P17020 682 aaPredicted RBP9.53□□□□□ -0.88
SCN9A-204ENST00000452182 TNFSF8P32971 234 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 SMCPP49901 116 aaPredicted RBP9.53□□□□□ -0.88
SCN9A-204ENST00000452182 DLX6P56179 175 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 MRPS15P82914 257 aaKnown RBP9.53□□□□□ -0.88
SCN9A-204ENST00000452182 ARFRP1Q13795 201 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 SRSF7Q16629 238 aaKnown RBP eCLIP9.53□□□□□ -0.88
SCN9A-204ENST00000452182 C6orf183Q5T699 404 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 CNIH2Q6PI25 160 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 MOB1BQ7L9L4 216 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 C11orf42Q8N5U0 333 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 OR6Q1Q8NGQ2 317 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 OR13A1Q8NGR1 328 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 DIRAS2Q96HU8 199 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 GAL3ST2Q9H3Q3 398 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 UNKLQ9H9P5 680 aaKnown RBP9.53□□□□□ -0.88
SCN9A-204ENST00000452182 ING3Q9NXR8 418 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 TRAPPC2LQ9UL33 140 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 MGAT4AQ9UM21 535 aa9.53□□□□□ -0.88
SCN9A-204ENST00000452182 KBTBD11-OT1A0A1B0GTJ5 212 aa9.52□□□□□ -0.89
SCN9A-204ENST00000452182 hCG_1809904A0A1W2PP81 198 aa9.52□□□□□ -0.89
SCN9A-204ENST00000452182 A0A1W2PPE2 198 aa9.52□□□□□ -0.89
SCN9A-204ENST00000452182 A0A1W2PR64 198 aa9.52□□□□□ -0.89
SCN9A-204ENST00000452182 A0A1W2PRV1 198 aa9.52□□□□□ -0.89
SCN9A-204ENST00000452182 ZNF729A6NN14 1252 aaPredicted RBP9.52□□□□□ -0.89
SCN9A-204ENST00000452182 C17orf98A8MV24 154 aa9.52□□□□□ -0.89
SCN9A-204ENST00000452182 DTYMKP23919 212 aa9.52□□□□□ -0.89
SCN9A-204ENST00000452182 GNG2P59768 71 aa9.52□□□□□ -0.89
SCN9A-204ENST00000452182 Q6ZPA2 131 aa9.52□□□□□ -0.89
SCN9A-204ENST00000452182 Q6ZS49 121 aa9.52□□□□□ -0.89
SCN9A-204ENST00000452182 TRAPPC6BQ86SZ2 158 aa9.52□□□□□ -0.89
SCN9A-204ENST00000452182 IZUMO1Q8IYV9 350 aa9.52□□□□□ -0.89
SCN9A-204ENST00000452182 OR4K15Q8NH41 348 aa9.52□□□□□ -0.89
SCN9A-204ENST00000452182 SOSTQ9BQB4 213 aa9.52□□□□□ -0.89
SCN9A-204ENST00000452182 HDHD3Q9BSH5 251 aaPredicted RBP9.52□□□□□ -0.89
SCN9A-204ENST00000452182 SIRPDQ9H106 197 aa9.52□□□□□ -0.89
SCN9A-204ENST00000452182 CHMP1AQ9HD42 196 aaPredicted RBP9.52□□□□□ -0.89
SCN9A-204ENST00000452182 ELF5Q9UKW6 265 aaPredicted RBP9.52□□□□□ -0.89
SCN9A-204ENST00000452182 ABCA1O95477 2261 aa9.52□□□□□ -0.89
SCN9A-204ENST00000452182 HIVEP1P15822 2718 aa9.52□□□□□ -0.89
SCN9A-204ENST00000452182 NPIPB11E5RHQ5 1161 aa9.51□□□□□ -0.89
SCN9A-204ENST00000452182 FCGR3AP08637 254 aa9.51□□□□□ -0.89
SCN9A-204ENST00000452182 MMP9P14780 707 aa9.51□□□□□ -0.89
SCN9A-204ENST00000452182 CCL3L1P16619 93 aa9.51□□□□□ -0.89
SCN9A-204ENST00000452182 RCC1P18754 421 aaPredicted RBP9.51□□□□□ -0.89
SCN9A-204ENST00000452182 ETV6P41212 452 aa9.51□□□□□ -0.89
SCN9A-204ENST00000452182 GLP1RP43220 463 aa9.51□□□□□ -0.89
SCN9A-204ENST00000452182 ARF6P62330 175 aa9.51□□□□□ -0.89
SCN9A-204ENST00000452182 C17orf58Q2M2W7 97 aa9.51□□□□□ -0.89
SCN9A-204ENST00000452182 METTL11BQ5VVY1 283 aa9.51□□□□□ -0.89
SCN9A-204ENST00000452182 HEPN1Q6WQI6 88 aa9.51□□□□□ -0.89
SCN9A-204ENST00000452182 CCDC190Q86UF4 302 aa9.51□□□□□ -0.89
SCN9A-204ENST00000452182 Q8N7P7 452 aa9.51□□□□□ -0.89
SCN9A-204ENST00000452182 OR10A7Q8NGE5 316 aa9.51□□□□□ -0.89
SCN9A-204ENST00000452182 MRGPRDQ8TDS7 321 aa9.51□□□□□ -0.89
SCN9A-204ENST00000452182 TMPRSS13Q9BYE2 586 aa9.51□□□□□ -0.89
SCN9A-204ENST00000452182 METTL8Q9H825 291 aaKnown RBP9.51□□□□□ -0.89
SCN9A-204ENST00000452182 SCPEP1Q9HB40 452 aa9.51□□□□□ -0.89
SCN9A-204ENST00000452182 Q9N2K0 584 aa9.51□□□□□ -0.89
SCN9A-204ENST00000452182 RAB9BQ9NP90 201 aa9.51□□□□□ -0.89
SCN9A-204ENST00000452182 ONECUT1Q9UBC0 465 aa9.51□□□□□ -0.89
SCN9A-204ENST00000452182 KCNS2Q9ULS6 477 aa9.51□□□□□ -0.89
SCN9A-204ENST00000452182 MRPS7Q9Y2R9 242 aaKnown RBP9.51□□□□□ -0.89
SCN9A-204ENST00000452182 AUP1Q9Y679 476 aa9.51□□□□□ -0.89
SCN9A-204ENST00000452182 KIAA2026Q5HYC2 2103 aa9.5□□□□□ -0.89
SCN9A-204ENST00000452182 C15orf65H3BRN8 121 aa9.5□□□□□ -0.89
SCN9A-204ENST00000452182 SULT1C2O00338 296 aa9.5□□□□□ -0.89
SCN9A-204ENST00000452182 SSX5O60225 188 aa9.5□□□□□ -0.89
SCN9A-204ENST00000452182 PRTN3P24158 256 aa9.5□□□□□ -0.89
SCN9A-204ENST00000452182 PTBP1P26599 531 aaKnown RBP eCLIP9.5□□□□□ -0.89
SCN9A-204ENST00000452182 PRSS3P35030 304 aa9.5□□□□□ -0.89
SCN9A-204ENST00000452182 CBX5P45973 191 aa9.5□□□□□ -0.89
SCN9A-204ENST00000452182 MRPS10P82664 201 aaKnown RBP9.5□□□□□ -0.89
SCN9A-204ENST00000452182 HMGN3Q15651 99 aa9.5□□□□□ -0.89
SCN9A-204ENST00000452182 TMEM30BQ3MIR4 351 aa9.5□□□□□ -0.89
SCN9A-204ENST00000452182 PYHIN1Q6K0P9 492 aa9.5□□□□□ -0.89
SCN9A-204ENST00000452182 FAHD2BQ6P2I3 314 aaPredicted RBP9.5□□□□□ -0.89
SCN9A-204ENST00000452182 DTX3Q8N9I9 347 aa9.5□□□□□ -0.89
SCN9A-204ENST00000452182 CCDC107Q8WV48 283 aa9.5□□□□□ -0.89
SCN9A-204ENST00000452182 NUDCD2Q8WVJ2 157 aa9.5□□□□□ -0.89
SCN9A-204ENST00000452182 FAHD2AQ96GK7 314 aa9.5□□□□□ -0.89
SCN9A-204ENST00000452182 ABHD1Q96SE0 405 aa9.5□□□□□ -0.89
SCN9A-204ENST00000452182 C7orf69Q9H7B7 122 aa9.5□□□□□ -0.89
SCN9A-204ENST00000452182 TMEM160Q9NX00 188 aa9.5□□□□□ -0.89
SCN9A-204ENST00000452182 CALYQ9NYX4 217 aa9.5□□□□□ -0.89
SCN9A-204ENST00000452182 KCNIP1Q9NZI2 227 aa9.5□□□□□ -0.89
SCN9A-204ENST00000452182 MAST4O15021 2626 aa9.5□□□□□ -0.89
SCN9A-204ENST00000452182 ACANP16112 2415 aa9.5□□□□□ -0.89
SCN9A-204ENST00000452182 TRAV39A0A0B4J263 110 aa9.49□□□□□ -0.89
SCN9A-204ENST00000452182 FABP12A6NFH5 140 aa9.49□□□□□ -0.89
SCN9A-204ENST00000452182 C12orf77C9JDV5 145 aa9.49□□□□□ -0.89
SCN9A-204ENST00000452182 CTDSPLO15194 276 aa9.49□□□□□ -0.89
SCN9A-204ENST00000452182 TOX4O94842 621 aa9.49□□□□□ -0.89
SCN9A-204ENST00000452182 LPLP06858 475 aa9.49□□□□□ -0.89
SCN9A-204ENST00000452182 IGHV1-8P0DP01 117 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms