RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, human

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SGCE-208	ENST00000450385	ZNF554	Q86TJ5	538 aa		12.82	□□□□□ -0.36
SGCE-208	ENST00000450385	BPIFB6	Q8NFQ5	453 aa		12.82	□□□□□ -0.36
SGCE-208	ENST00000450385	TOMM40L	Q969M1	308 aa		12.82	□□□□□ -0.36
SGCE-208	ENST00000450385	SCN3B	Q9NY72	215 aa		12.82	□□□□□ -0.36
SGCE-208	ENST00000450385	RCC2	Q9P258	522 aa	Known RBP	12.82	□□□□□ -0.36
SGCE-208	ENST00000450385	MRPS28	Q9Y2Q9	187 aa	Known RBP	12.82	□□□□□ -0.36
SGCE-208	ENST00000450385	TRAV8-7	A0A075B6U6	113 aa		12.81	□□□□□ -0.36
SGCE-208	ENST00000450385	MT-ND4	P03905	459 aa		12.81	□□□□□ -0.36
SGCE-208	ENST00000450385	CDK1	P06493	297 aa		12.81	□□□□□ -0.36
SGCE-208	ENST00000450385	LPL	P06858	475 aa		12.81	□□□□□ -0.36
SGCE-208	ENST00000450385	ZNF816	Q0VGE8	651 aa	Predicted RBP	12.81	□□□□□ -0.36
SGCE-208	ENST00000450385	BAIAP2L2	Q6UXY1	529 aa		12.81	□□□□□ -0.36
SGCE-208	ENST00000450385	AHSA2	Q719I0	299 aa		12.81	□□□□□ -0.36
SGCE-208	ENST00000450385	CENPV	Q7Z7K6	275 aa	Predicted RBP	12.81	□□□□□ -0.36
SGCE-208	ENST00000450385	GAPT	Q8N292	157 aa		12.81	□□□□□ -0.36
SGCE-208	ENST00000450385	JAGN1	Q8N5M9	183 aa		12.81	□□□□□ -0.36
SGCE-208	ENST00000450385	OR10X1	Q8NGY0	326 aa		12.81	□□□□□ -0.36
SGCE-208	ENST00000450385	PLPPR1	Q8TBJ4	325 aa		12.81	□□□□□ -0.36
SGCE-208	ENST00000450385	MRGPRD	Q8TDS7	321 aa		12.81	□□□□□ -0.36
SGCE-208	ENST00000450385	PHYHIP	Q92561	330 aa		12.81	□□□□□ -0.36
SGCE-208	ENST00000450385	OR14A2	Q96R54	314 aa		12.81	□□□□□ -0.36
SGCE-208	ENST00000450385	ING3	Q9NXR8	418 aa		12.81	□□□□□ -0.36
SGCE-208	ENST00000450385	LRRC42	Q9Y546	428 aa		12.81	□□□□□ -0.36
SGCE-208	ENST00000450385	SPINT2	O43291	252 aa		12.8	□□□□□ -0.36
SGCE-208	ENST00000450385	FGF16	O43320	207 aa		12.8	□□□□□ -0.36
SGCE-208	ENST00000450385	SC5D	O75845	299 aa		12.8	□□□□□ -0.36
SGCE-208	ENST00000450385	GAPDH	P04406	335 aa	Known RBP	12.8	□□□□□ -0.36
SGCE-208	ENST00000450385	FUT3	P21217	361 aa		12.8	□□□□□ -0.36
SGCE-208	ENST00000450385	CD83	Q01151	205 aa		12.8	□□□□□ -0.36
SGCE-208	ENST00000450385	HABP2	Q14520	560 aa	Predicted RBP	12.8	□□□□□ -0.36
SGCE-208	ENST00000450385	C6orf141	Q5SZD1	244 aa		12.8	□□□□□ -0.36
SGCE-208	ENST00000450385	ATAD3C	Q5T2N8	411 aa		12.8	□□□□□ -0.36
SGCE-208	ENST00000450385	C6orf183	Q5T699	404 aa		12.8	□□□□□ -0.36
SGCE-208	ENST00000450385	GLIPR1L1	Q6UWM5	242 aa		12.8	□□□□□ -0.36
SGCE-208	ENST00000450385	UNQ9370/PRO34162	Q6UXP9	181 aa		12.8	□□□□□ -0.36
SGCE-208	ENST00000450385	LYPD6	Q86Y78	171 aa		12.8	□□□□□ -0.36
SGCE-208	ENST00000450385	OR5AU1	Q8NGC0	362 aa		12.8	□□□□□ -0.36
SGCE-208	ENST00000450385	OR13C5	Q8NGS8	318 aa		12.8	□□□□□ -0.36
SGCE-208	ENST00000450385	ARL11	Q969Q4	196 aa		12.8	□□□□□ -0.36
SGCE-208	ENST00000450385	CST11	Q9H112	138 aa		12.8	□□□□□ -0.36
SGCE-208	ENST00000450385	MOB4	Q9Y3A3	225 aa		12.8	□□□□□ -0.36
SGCE-208	ENST00000450385		H0YHG0	523 aa		12.79	□□□□□ -0.36
SGCE-208	ENST00000450385	C15orf65	H3BRN8	121 aa		12.79	□□□□□ -0.36
SGCE-208	ENST00000450385	TXNL1	O43396	289 aa		12.79	□□□□□ -0.36
SGCE-208	ENST00000450385	CD28	P10747	220 aa		12.79	□□□□□ -0.36
SGCE-208	ENST00000450385	IL3RA	P26951	378 aa		12.79	□□□□□ -0.36
SGCE-208	ENST00000450385	EBI3	Q14213	229 aa		12.79	□□□□□ -0.36
SGCE-208	ENST00000450385	SPHAR	Q15513	63 aa		12.79	□□□□□ -0.36
SGCE-208	ENST00000450385	KPRP	Q5T749	579 aa	Predicted RBP	12.79	□□□□□ -0.36
SGCE-208	ENST00000450385	AWAT2	Q6E213	333 aa		12.79	□□□□□ -0.36
SGCE-208	ENST00000450385	REC114	Q7Z4M0	266 aa		12.79	□□□□□ -0.36
SGCE-208	ENST00000450385	ZFP41	Q8N8Y5	198 aa		12.79	□□□□□ -0.36
SGCE-208	ENST00000450385	RFESD	Q8TAC1	157 aa		12.79	□□□□□ -0.36
SGCE-208	ENST00000450385	MUL1	Q969V5	352 aa		12.79	□□□□□ -0.36
SGCE-208	ENST00000450385	VCX3B	Q9H321	246 aa		12.79	□□□□□ -0.36
SGCE-208	ENST00000450385	TPRKB	Q9Y3C4	175 aa		12.79	□□□□□ -0.36
SGCE-208	ENST00000450385	TG	P01266	2768 aa		12.78	□□□□□ -0.36
SGCE-208	ENST00000450385	FAM172BP	A6NC97	362 aa		12.78	□□□□□ -0.36
SGCE-208	ENST00000450385	AIP	O00170	330 aa		12.78	□□□□□ -0.36
SGCE-208	ENST00000450385	CD37	P11049	281 aa		12.78	□□□□□ -0.36
SGCE-208	ENST00000450385	JUNB	P17275	347 aa	Predicted RBP	12.78	□□□□□ -0.36
SGCE-208	ENST00000450385	SLC6A1	P30531	599 aa		12.78	□□□□□ -0.36
SGCE-208	ENST00000450385	SSTR5	P35346	364 aa		12.78	□□□□□ -0.36
SGCE-208	ENST00000450385	TRAM1	Q15629	374 aa		12.78	□□□□□ -0.36
SGCE-208	ENST00000450385	ABCA11P	Q4W5N1	156 aa		12.78	□□□□□ -0.36
SGCE-208	ENST00000450385	ACSM3	Q53FZ2	586 aa		12.78	□□□□□ -0.36
SGCE-208	ENST00000450385	GLT8D1	Q68CQ7	371 aa		12.78	□□□□□ -0.36
SGCE-208	ENST00000450385	RAB12	Q6IQ22	244 aa		12.78	□□□□□ -0.36
SGCE-208	ENST00000450385	OR4X2	Q8NGF9	303 aa		12.78	□□□□□ -0.36
SGCE-208	ENST00000450385	NEK7	Q8TDX7	302 aa		12.78	□□□□□ -0.36
SGCE-208	ENST00000450385	ISYNA1	Q9NPH2	558 aa		12.78	□□□□□ -0.36
SGCE-208	ENST00000450385	GFOD1	Q9NXC2	390 aa		12.78	□□□□□ -0.36
SGCE-208	ENST00000450385	ETAA1	Q9NY74	926 aa		12.78	□□□□□ -0.36
SGCE-208	ENST00000450385	TSSC4	Q9Y5U2	329 aa	Predicted RBP	12.78	□□□□□ -0.36
SGCE-208	ENST00000450385	NOTCH3	Q9UM47	2321 aa		12.78	□□□□□ -0.36
SGCE-208	ENST00000450385		A0A1W2PPI3	338 aa		12.77	□□□□□ -0.37
SGCE-208	ENST00000450385	ERICH4	A6NGS2	130 aa		12.77	□□□□□ -0.37
SGCE-208	ENST00000450385	SDCBP	O00560	298 aa	Predicted RBP	12.77	□□□□□ -0.37
SGCE-208	ENST00000450385	PIN1P1	O15428	100 aa		12.77	□□□□□ -0.37
SGCE-208	ENST00000450385	MAS1	P04201	325 aa		12.77	□□□□□ -0.37
SGCE-208	ENST00000450385	AMY1A	P04745	511 aa		12.77	□□□□□ -0.37
SGCE-208	ENST00000450385	AMY2A	P04746	511 aa		12.77	□□□□□ -0.37
SGCE-208	ENST00000450385	MGMT	P16455	207 aa		12.77	□□□□□ -0.37
SGCE-208	ENST00000450385	ZNF137P	P52743	207 aa		12.77	□□□□□ -0.37
SGCE-208	ENST00000450385	LOXL3	P58215	753 aa		12.77	□□□□□ -0.37
SGCE-208	ENST00000450385	LY6G6F	Q5SQ64	297 aa		12.77	□□□□□ -0.37
SGCE-208	ENST00000450385		Q6ZS46	218 aa		12.77	□□□□□ -0.37
SGCE-208	ENST00000450385	C11orf44	Q8N8P7	122 aa		12.77	□□□□□ -0.37
SGCE-208	ENST00000450385	WFDC9	Q8NEX5	89 aa		12.77	□□□□□ -0.37
SGCE-208	ENST00000450385	OR8H1	Q8NGG4	311 aa		12.77	□□□□□ -0.37
SGCE-208	ENST00000450385	ORAI1	Q96D31	301 aa		12.77	□□□□□ -0.37
SGCE-208	ENST00000450385	R3HDM4	Q96D70	268 aa		12.77	□□□□□ -0.37
SGCE-208	ENST00000450385		Q96M66	194 aa		12.77	□□□□□ -0.37
SGCE-208	ENST00000450385	CITED2	Q99967	270 aa	Predicted RBP	12.77	□□□□□ -0.37
SGCE-208	ENST00000450385	SELENOI	Q9C0D9	397 aa		12.77	□□□□□ -0.37
SGCE-208	ENST00000450385	TRAPPC2L	Q9UL33	140 aa		12.77	□□□□□ -0.37
SGCE-208	ENST00000450385	PEX16	Q9Y5Y5	336 aa		12.77	□□□□□ -0.37
SGCE-208	ENST00000450385		A0A1W2PPK0	400 aa		12.76	□□□□□ -0.37
SGCE-208	ENST00000450385	MAGEA13P	A6NCF6	341 aa		12.76	□□□□□ -0.37
SGCE-208	ENST00000450385	PTGES3L	E9PB15	166 aa		12.76	□□□□□ -0.37

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