RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 BANF2Q9H503 90 aa14.07□□□□□ -0.16
FAM3A-216ENST00000449971 TMEM30CPA0ZSE6 113 aa14.06□□□□□ -0.16
FAM3A-216ENST00000449971 MEGF11A6BM72 1044 aa14.06□□□□□ -0.16
FAM3A-216ENST00000449971 RGS10O43665 173 aa14.06□□□□□ -0.16
FAM3A-216ENST00000449971 CRTAPO75718 401 aaPredicted RBP14.06□□□□□ -0.16
FAM3A-216ENST00000449971 MPIG6BO95866 241 aa14.06□□□□□ -0.16
FAM3A-216ENST00000449971 GZMHP20718 246 aa14.06□□□□□ -0.16
FAM3A-216ENST00000449971 CD24P25063 80 aa14.06□□□□□ -0.16
FAM3A-216ENST00000449971 ARHGDIBP52566 201 aa14.06□□□□□ -0.16
FAM3A-216ENST00000449971 PAX5Q02548 391 aa14.06□□□□□ -0.16
FAM3A-216ENST00000449971 IRF3Q14653 427 aa14.06□□□□□ -0.16
FAM3A-216ENST00000449971 TPTE2P1Q5T6R2 138 aa14.06□□□□□ -0.16
FAM3A-216ENST00000449971 FAM27D1Q5T7N8 215 aa14.06□□□□□ -0.16
FAM3A-216ENST00000449971 C11orf87Q6NUJ2 197 aa14.06□□□□□ -0.16
FAM3A-216ENST00000449971 C11orf88Q6PI97 169 aa14.06□□□□□ -0.16
FAM3A-216ENST00000449971 CEACAM19Q7Z692 300 aa14.06□□□□□ -0.16
FAM3A-216ENST00000449971 NKAIN3Q8N8D7 197 aa14.06□□□□□ -0.16
FAM3A-216ENST00000449971 OR9G1Q8NH87 305 aa14.06□□□□□ -0.16
FAM3A-216ENST00000449971 CCDC107Q8WV48 283 aa14.06□□□□□ -0.16
FAM3A-216ENST00000449971 MRPS24Q96EL2 167 aaKnown RBP14.06□□□□□ -0.16
FAM3A-216ENST00000449971 SELENOIQ9C0D9 397 aa14.06□□□□□ -0.16
FAM3A-216ENST00000449971 DUSP21Q9H596 190 aa14.06□□□□□ -0.16
FAM3A-216ENST00000449971 KIAA2026Q5HYC2 2103 aa14.05□□□□□ -0.16
FAM3A-216ENST00000449971 FAM90A22PA8MWA6 464 aa14.05□□□□□ -0.16
FAM3A-216ENST00000449971 MCRIP1C9JLW8 97 aa14.05□□□□□ -0.16
FAM3A-216ENST00000449971 NPIPB11E5RHQ5 1161 aa14.05□□□□□ -0.16
FAM3A-216ENST00000449971 HSMCR30P0CW71 290 aa14.05□□□□□ -0.16
FAM3A-216ENST00000449971 SSTR5P35346 364 aa14.05□□□□□ -0.16
FAM3A-216ENST00000449971 HSPA13P48723 471 aa14.05□□□□□ -0.16
FAM3A-216ENST00000449971 HABP2Q14520 560 aaPredicted RBP14.05□□□□□ -0.16
FAM3A-216ENST00000449971 LYPD6Q86Y78 171 aa14.05□□□□□ -0.16
FAM3A-216ENST00000449971 UFD1Q92890 307 aa14.05□□□□□ -0.16
FAM3A-216ENST00000449971 PHF21AQ96BD5 680 aa14.05□□□□□ -0.16
FAM3A-216ENST00000449971 UQCC2Q9BRT2 126 aa14.05□□□□□ -0.16
FAM3A-216ENST00000449971 PRSS22Q9GZN4 317 aa14.05□□□□□ -0.16
FAM3A-216ENST00000449971 MMP28Q9H239 520 aa14.05□□□□□ -0.16
FAM3A-216ENST00000449971 LINC00574Q9H8X3 128 aa14.05□□□□□ -0.16
FAM3A-216ENST00000449971 ZNF702PQ9H963 129 aa14.05□□□□□ -0.16
FAM3A-216ENST00000449971 SPACA1Q9HBV2 294 aa14.05□□□□□ -0.16
FAM3A-216ENST00000449971 LY6LH3BQJ8 138 aa14.04□□□□□ -0.16
FAM3A-216ENST00000449971 J3QR06 171 aa14.04□□□□□ -0.16
FAM3A-216ENST00000449971 MT-ND4P03905 459 aa14.04□□□□□ -0.16
FAM3A-216ENST00000449971 MGMTP16455 207 aa14.04□□□□□ -0.16
FAM3A-216ENST00000449971 GNG10P50151 68 aa14.04□□□□□ -0.16
FAM3A-216ENST00000449971 GP2P55259 537 aaKnown RBP14.04□□□□□ -0.16
FAM3A-216ENST00000449971 GPR50Q13585 617 aa14.04□□□□□ -0.16
FAM3A-216ENST00000449971 ARSJQ5FYB0 599 aaPredicted RBP14.04□□□□□ -0.16
FAM3A-216ENST00000449971 RBM48Q5RL73 367 aaKnown RBP14.04□□□□□ -0.16
FAM3A-216ENST00000449971 LIPKQ5VXJ0 399 aa14.04□□□□□ -0.16
FAM3A-216ENST00000449971 RAB12Q6IQ22 244 aa14.04□□□□□ -0.16
FAM3A-216ENST00000449971 TMEM104Q8NE00 496 aa14.04□□□□□ -0.16
FAM3A-216ENST00000449971 OR10A7Q8NGE5 316 aa14.04□□□□□ -0.16
FAM3A-216ENST00000449971 CAPSLQ8WWF8 208 aa14.04□□□□□ -0.16
FAM3A-216ENST00000449971 ARL11Q969Q4 196 aa14.04□□□□□ -0.16
FAM3A-216ENST00000449971 TMEM203Q969S6 136 aa14.04□□□□□ -0.16
FAM3A-216ENST00000449971 CNBD2Q96M20 576 aa14.04□□□□□ -0.16
FAM3A-216ENST00000449971 PSG11Q9UQ72 335 aa14.04□□□□□ -0.16
FAM3A-216ENST00000449971 AMMECR1Q9Y4X0 333 aaPredicted RBP14.04□□□□□ -0.16
FAM3A-216ENST00000449971 PEX16Q9Y5Y5 336 aa14.04□□□□□ -0.16
FAM3A-216ENST00000449971 AIPO00170 330 aa14.03□□□□□ -0.16
FAM3A-216ENST00000449971 SRMP19623 302 aa14.03□□□□□ -0.16
FAM3A-216ENST00000449971 CRHBPP24387 322 aa14.03□□□□□ -0.16
FAM3A-216ENST00000449971 VHLP40337 213 aa14.03□□□□□ -0.16
FAM3A-216ENST00000449971 MNDAP41218 407 aa14.03□□□□□ -0.16
FAM3A-216ENST00000449971 BLCAPP62952 87 aa14.03□□□□□ -0.16
FAM3A-216ENST00000449971 HSD17B12Q53GQ0 312 aa14.03□□□□□ -0.16
FAM3A-216ENST00000449971 GLT8D1Q68CQ7 371 aa14.03□□□□□ -0.16
FAM3A-216ENST00000449971 CCDC144NLQ6NUI1 221 aa14.03□□□□□ -0.16
FAM3A-216ENST00000449971 ZNF497Q6ZNH5 498 aa14.03□□□□□ -0.16
FAM3A-216ENST00000449971 LRRTM1Q86UE6 522 aa14.03□□□□□ -0.16
FAM3A-216ENST00000449971 UBALD1Q8TB05 177 aa14.03□□□□□ -0.16
FAM3A-216ENST00000449971 PHYHIPQ92561 330 aa14.03□□□□□ -0.16
FAM3A-216ENST00000449971 FAM46BQ96A09 425 aa14.03□□□□□ -0.16
FAM3A-216ENST00000449971 RPEQ96AT9 228 aa14.03□□□□□ -0.16
FAM3A-216ENST00000449971 R3HDM4Q96D70 268 aa14.03□□□□□ -0.16
FAM3A-216ENST00000449971 ETAA1Q9NY74 926 aa14.03□□□□□ -0.16
FAM3A-216ENST00000449971 GHRLQ9UBU3 117 aa14.03□□□□□ -0.16
FAM3A-216ENST00000449971 TRAPPC2LQ9UL33 140 aa14.03□□□□□ -0.16
FAM3A-216ENST00000449971 OOSP1A8MZH6 123 aa14.02□□□□□ -0.17
FAM3A-216ENST00000449971 FUT3P21217 361 aa14.02□□□□□ -0.17
FAM3A-216ENST00000449971 MAP2K4P45985 399 aa14.02□□□□□ -0.17
FAM3A-216ENST00000449971 FOXB2Q5VYV0 432 aa14.02□□□□□ -0.17
FAM3A-216ENST00000449971 SLC16A12Q6ZSM3 486 aa14.02□□□□□ -0.17
FAM3A-216ENST00000449971 Q8N2B8 174 aa14.02□□□□□ -0.17
FAM3A-216ENST00000449971 TOMM40LQ969M1 308 aa14.02□□□□□ -0.17
FAM3A-216ENST00000449971 CST11Q9H112 138 aa14.02□□□□□ -0.17
FAM3A-216ENST00000449971 SERTAD4Q9NUC0 356 aa14.02□□□□□ -0.17
FAM3A-216ENST00000449971 RCC2Q9P258 522 aaKnown RBP14.02□□□□□ -0.17
FAM3A-216ENST00000449971 A0A1W2PPE3 182 aa14.01□□□□□ -0.17
FAM3A-216ENST00000449971 UBE2QL1A1L167 161 aa14.01□□□□□ -0.17
FAM3A-216ENST00000449971 FAM90A10PA6NDY2 464 aa14.01□□□□□ -0.17
FAM3A-216ENST00000449971 FAM90A18PA6NE21 464 aa14.01□□□□□ -0.17
FAM3A-216ENST00000449971 FAM90A16PA6NEW6 464 aa14.01□□□□□ -0.17
FAM3A-216ENST00000449971 FAM90A20PA6NIJ5 464 aa14.01□□□□□ -0.17
FAM3A-216ENST00000449971 FAM90A7PA6NKC0 464 aa14.01□□□□□ -0.17
FAM3A-216ENST00000449971 FAM90A12PA8MX19 464 aa14.01□□□□□ -0.17
FAM3A-216ENST00000449971 FAM90A5PA8MXJ8 464 aa14.01□□□□□ -0.17
FAM3A-216ENST00000449971 FAM90A23PA8MXZ1 464 aa14.01□□□□□ -0.17
FAM3A-216ENST00000449971 C15orf65H3BRN8 121 aa14.01□□□□□ -0.17
FAM3A-216ENST00000449971 SDCBPO00560 298 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms