RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 SLC5A7Q9GZV3 580 aa13.62□□□□□ -0.23
AP000253.1-201ENST00000449339 MSL2Q9HCI7 577 aa13.62□□□□□ -0.23
AP000253.1-201ENST00000449339 FBXO9Q9UK97 447 aaPredicted RBP13.62□□□□□ -0.23
AP000253.1-201ENST00000449339 PCDHB10Q9UN67 800 aa13.62□□□□□ -0.23
AP000253.1-201ENST00000449339 A0A1B0GW55 424 aa13.61□□□□□ -0.23
AP000253.1-201ENST00000449339 GPR31O00270 319 aa13.61□□□□□ -0.23
AP000253.1-201ENST00000449339 SLC33A1O00400 549 aaPredicted RBP13.61□□□□□ -0.23
AP000253.1-201ENST00000449339 DUX4L2P0CJ85 424 aa13.61□□□□□ -0.23
AP000253.1-201ENST00000449339 DUX4L3P0CJ86 424 aa13.61□□□□□ -0.23
AP000253.1-201ENST00000449339 DUX4L4P0CJ87 422 aa13.61□□□□□ -0.23
AP000253.1-201ENST00000449339 DUX4L5P0CJ88 424 aa13.61□□□□□ -0.23
AP000253.1-201ENST00000449339 DUX4L6P0CJ89 424 aa13.61□□□□□ -0.23
AP000253.1-201ENST00000449339 DUX4L7P0CJ90 424 aa13.61□□□□□ -0.23
AP000253.1-201ENST00000449339 TUBG1P23258 451 aa13.61□□□□□ -0.23
AP000253.1-201ENST00000449339 ZNF146Q15072 292 aa13.61□□□□□ -0.23
AP000253.1-201ENST00000449339 MEX3BQ6ZN04 569 aaKnown RBP13.61□□□□□ -0.23
AP000253.1-201ENST00000449339 TBC1D26Q86UD7 250 aa13.61□□□□□ -0.23
AP000253.1-201ENST00000449339 GAPTQ8N292 157 aa13.61□□□□□ -0.23
AP000253.1-201ENST00000449339 TMEM222Q9H0R3 208 aa13.61□□□□□ -0.23
AP000253.1-201ENST00000449339 TUBG2Q9NRH3 451 aa13.61□□□□□ -0.23
AP000253.1-201ENST00000449339 TREM2Q9NZC2 230 aa13.61□□□□□ -0.23
AP000253.1-201ENST00000449339 DUX4Q9UBX2 424 aa13.61□□□□□ -0.23
AP000253.1-201ENST00000449339 LSM5Q9Y4Y9 91 aaKnown RBP13.61□□□□□ -0.23
AP000253.1-201ENST00000449339 SESN1Q9Y6P5 492 aa13.61□□□□□ -0.23
AP000253.1-201ENST00000449339 NCOR2Q9Y618 2525 aa13.61□□□□□ -0.23
AP000253.1-201ENST00000449339 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.6□□□□□ -0.23
AP000253.1-201ENST00000449339 HKR1P10072 659 aa13.6□□□□□ -0.23
AP000253.1-201ENST00000449339 MDH2P40926 338 aaKnown RBP13.6□□□□□ -0.23
AP000253.1-201ENST00000449339 RND3P61587 244 aa13.6□□□□□ -0.23
AP000253.1-201ENST00000449339 HLA-DRB3P79483 266 aa13.6□□□□□ -0.23
AP000253.1-201ENST00000449339 SLC35G3Q8N808 338 aa13.6□□□□□ -0.23
AP000253.1-201ENST00000449339 OR10J5Q8NHC4 309 aa13.6□□□□□ -0.23
AP000253.1-201ENST00000449339 TMED3Q9Y3Q3 217 aa13.6□□□□□ -0.23
AP000253.1-201ENST00000449339 A8MXK9 166 aa13.6□□□□□ -0.23
AP000253.1-201ENST00000449339 K7EPK0 472 aa13.6□□□□□ -0.23
AP000253.1-201ENST00000449339 MBPP02686 304 aaPredicted RBP13.6□□□□□ -0.23
AP000253.1-201ENST00000449339 FGF2P09038 288 aa13.6□□□□□ -0.23
AP000253.1-201ENST00000449339 RPL12P30050 165 aaKnown RBP13.6□□□□□ -0.23
AP000253.1-201ENST00000449339 SRPXP78539 464 aa13.6□□□□□ -0.23
AP000253.1-201ENST00000449339 ZNF718Q3SXZ3 478 aa13.6□□□□□ -0.23
AP000253.1-201ENST00000449339 TMEM268Q5VZI3 342 aa13.6□□□□□ -0.23
AP000253.1-201ENST00000449339 ZNF826PQ6ZT77 177 aa13.6□□□□□ -0.23
AP000253.1-201ENST00000449339 LRP11Q86VZ4 500 aa13.6□□□□□ -0.23
AP000253.1-201ENST00000449339 FAM71E2Q8N5Q1 922 aa13.6□□□□□ -0.23
AP000253.1-201ENST00000449339 FAM169BQ8N8A8 192 aa13.6□□□□□ -0.23
AP000253.1-201ENST00000449339 LRRC20Q8TCA0 184 aa13.6□□□□□ -0.23
AP000253.1-201ENST00000449339 KIRREL1Q96J84 757 aa13.6□□□□□ -0.23
AP000253.1-201ENST00000449339 BARX1Q9HBU1 254 aaPredicted RBP13.6□□□□□ -0.23
AP000253.1-201ENST00000449339 ZC4H2Q9NQZ6 224 aa13.6□□□□□ -0.23
AP000253.1-201ENST00000449339 ZNF835Q9Y2P0 537 aa13.6□□□□□ -0.23
AP000253.1-201ENST00000449339 SPTA1P02549 2419 aa13.59□□□□□ -0.23
AP000253.1-201ENST00000449339 SH2D1BO14796 132 aa13.59□□□□□ -0.23
AP000253.1-201ENST00000449339 KITLGP21583 273 aa13.59□□□□□ -0.23
AP000253.1-201ENST00000449339 GCH1P30793 250 aa13.59□□□□□ -0.23
AP000253.1-201ENST00000449339 ZNF497Q6ZNH5 498 aa13.59□□□□□ -0.23
AP000253.1-201ENST00000449339 HSD17B13Q7Z5P4 300 aaPredicted RBP13.59□□□□□ -0.23
AP000253.1-201ENST00000449339 PLPPR1Q8TBJ4 325 aa13.59□□□□□ -0.23
AP000253.1-201ENST00000449339 IL1F10Q8WWZ1 152 aa13.59□□□□□ -0.23
AP000253.1-201ENST00000449339 MUCL1Q96DR8 90 aa13.59□□□□□ -0.23
AP000253.1-201ENST00000449339 CABLES2Q9BTV7 478 aa13.59□□□□□ -0.23
AP000253.1-201ENST00000449339 CCL28Q9NRJ3 127 aa13.59□□□□□ -0.23
AP000253.1-201ENST00000449339 UBE2J1Q9Y385 318 aaPredicted RBP13.59□□□□□ -0.23
AP000253.1-201ENST00000449339 HSD17B6O14756 317 aa13.59□□□□□ -0.23
AP000253.1-201ENST00000449339 ACAA1P09110 424 aaPredicted RBP13.59□□□□□ -0.23
AP000253.1-201ENST00000449339 CCKARP32238 428 aa13.59□□□□□ -0.23
AP000253.1-201ENST00000449339 PRAMEF6Q5VXH4 476 aa13.59□□□□□ -0.23
AP000253.1-201ENST00000449339 CMTM1Q8IZ96 169 aa13.59□□□□□ -0.23
AP000253.1-201ENST00000449339 EIF4E3Q8N5X7 224 aaKnown RBP13.59□□□□□ -0.23
AP000253.1-201ENST00000449339 BVESQ8NE79 360 aa13.59□□□□□ -0.23
AP000253.1-201ENST00000449339 OR52M1Q8NGK5 317 aa13.59□□□□□ -0.23
AP000253.1-201ENST00000449339 GPHA2Q96T91 129 aa13.59□□□□□ -0.23
AP000253.1-201ENST00000449339 HES4Q9HCC6 221 aa13.59□□□□□ -0.23
AP000253.1-201ENST00000449339 OR2S2Q9NQN1 319 aa13.59□□□□□ -0.23
AP000253.1-201ENST00000449339 OR2W1Q9Y3N9 320 aa13.59□□□□□ -0.23
AP000253.1-201ENST00000449339 ATRXP46100 2492 aa13.59□□□□□ -0.23
AP000253.1-201ENST00000449339 ICE1Q9Y2F5 2266 aa13.58□□□□□ -0.24
AP000253.1-201ENST00000449339 TRAV39A0A0B4J263 110 aa13.58□□□□□ -0.24
AP000253.1-201ENST00000449339 ZP3P21754 424 aa13.58□□□□□ -0.24
AP000253.1-201ENST00000449339 UCNP55089 124 aa13.58□□□□□ -0.24
AP000253.1-201ENST00000449339 SHEQ5VZ18 495 aa13.58□□□□□ -0.24
AP000253.1-201ENST00000449339 MOB1BQ7L9L4 216 aa13.58□□□□□ -0.24
AP000253.1-201ENST00000449339 C11orf53Q8IXP5 236 aa13.58□□□□□ -0.24
AP000253.1-201ENST00000449339 GALNT11Q8NCW6 608 aa13.58□□□□□ -0.24
AP000253.1-201ENST00000449339 TMEM56Q96MV1 263 aa13.58□□□□□ -0.24
AP000253.1-201ENST00000449339 LINC00052Q96N35 136 aa13.58□□□□□ -0.24
AP000253.1-201ENST00000449339 USB1Q9BQ65 265 aaKnown RBP13.58□□□□□ -0.24
AP000253.1-201ENST00000449339 DNTTIP1Q9H147 329 aa13.58□□□□□ -0.24
AP000253.1-201ENST00000449339 CXXC4Q9H2H0 198 aa13.58□□□□□ -0.24
AP000253.1-201ENST00000449339 TMEM56-RWDD3S4R434 201 aa13.58□□□□□ -0.24
AP000253.1-201ENST00000449339 CHD3Q12873 2000 aaKnown RBP13.58□□□□□ -0.24
AP000253.1-201ENST00000449339 TAAR5O14804 337 aa13.58□□□□□ -0.24
AP000253.1-201ENST00000449339 MBNL2Q5VZF2 373 aaKnown RBP13.58□□□□□ -0.24
AP000253.1-201ENST00000449339 VHLLQ6RSH7 139 aa13.58□□□□□ -0.24
AP000253.1-201ENST00000449339 FIP1L1Q6UN15 594 aaKnown RBP13.58□□□□□ -0.24
AP000253.1-201ENST00000449339 H1FOOQ8IZA3 346 aaPredicted RBP13.58□□□□□ -0.24
AP000253.1-201ENST00000449339 TMED6Q8WW62 240 aa13.58□□□□□ -0.24
AP000253.1-201ENST00000449339 UFSP2Q9NUQ7 469 aa13.58□□□□□ -0.24
AP000253.1-201ENST00000449339 OR14J1Q9UGF5 321 aa13.58□□□□□ -0.24
AP000253.1-201ENST00000449339 DUSP13Q9UII6 198 aa13.58□□□□□ -0.24
AP000253.1-201ENST00000449339 TRAPPC2LQ9UL33 140 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms