RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 IKZF5Q9H5V7 419 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 PLEKHF2Q9H8W4 249 aa4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 ZNF275Q9NSD4 429 aaPredicted RBP4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 FN1P02751 2386 aaKnown RBP4.82□□□□□ -1.64
CDC42BPA-209ENST00000448940 IGLV3-32A0A0A0MS00 114 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 GIPP09681 153 aaPredicted RBP4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 PPP1CCP36873 323 aaKnown RBP4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 DAZAP2Q15038 168 aaPredicted RBP4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 ZFP69Q49AA0 526 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 ABLIM2Q6H8Q1 611 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 ZIC4Q8N9L1 334 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 MEGF10Q96KG7 1140 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 HSD17B10Q99714 261 aaKnown RBP4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 CLEC7AQ9BXN2 247 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 LRP12Q9Y561 859 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 TLN2Q9Y4G6 2542 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 COL5A1P20908 1838 aaPredicted RBP4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 DLGAP1O14490 977 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 GOSR2O14653 212 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 ADAP1O75689 374 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 OR5G3P0C626 314 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 STEAP1BQ6NZ63 245 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 OR2T10Q8NGZ9 312 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 GIMAP1Q8WWP7 306 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 FCAMRQ8WWV6 532 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 ARPC1AQ92747 370 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 NRIP3Q9NQ35 241 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 ALG5Q9Y673 324 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 OR2AT4A6NND4 320 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 HAND1O96004 215 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 IGKV3-20P01619 116 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 OR8U8P0C7N1 319 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 NR4A2P43354 598 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 ADORA2A-AS1P86434 159 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 ZNF773Q6PK81 442 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 ZNF705AQ6ZN79 300 aaPredicted RBP4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 DTD1Q8TEA8 209 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 FBLIM1Q8WUP2 373 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 DAZAP1Q96EP5 407 aaKnown RBP4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 SPACA5Q96QH8 159 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 MRPL37Q9BZE1 423 aaKnown RBP4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 FABP12A6NFH5 140 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 DPRXA6NFQ7 191 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 TMEM262E9PQX1 116 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 RHBDL1O75783 438 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 SLC22A5O76082 557 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 SNRNP70P08621 437 aaKnown RBP4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 FUT3P21217 361 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 HTR2AP28223 471 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 MTNR1BP49286 362 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 TAS2R46P59540 309 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 NCS1P62166 190 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 GLYATL3Q5SZD4 288 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 TOMM5Q8N4H5 51 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 STXBP6Q8NFX7 210 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 TXN2Q99757 166 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 POFUT1Q9H488 388 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 WNT9BO14905 357 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 RP2O75695 350 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 HRASP01112 189 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 ZP3P21754 424 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 ERP29P30040 261 aaKnown RBP4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 ALDH3B2P48448 385 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 MRPS11P82912 194 aaKnown RBP4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 MRGPRDQ8TDS7 321 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 PHYHIPQ92561 330 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 GHSRQ92847 366 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 POM121L2Q96KW2 1035 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 FCRL1Q96LA6 429 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 BIN3Q9NQY0 253 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 SMIM30A4D0T7 59 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 PLAUP00749 431 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 ZNF26P17031 533 aaPredicted RBP4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 PPOXP50336 477 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 ZNF691Q5VV52 312 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 TREML4Q6UXN2 200 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 TMEM219Q86XT9 240 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 ADAD2Q8NCV1 583 aaKnown RBP4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 UBALD1Q8TB05 177 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 SNAPC3Q92966 411 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 ST6GALNAC6Q969X2 333 aa4.81□□□□□ -1.64
CDC42BPA-209ENST00000448940 IGHV3-43A0A0B4J1X8 118 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 hCG_38984A0A1B0GV85 526 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 TMEM218A2RU14 115 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 LHBP01229 141 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 IGHV3-43DP0DP04 118 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 ELF3P78545 371 aaPredicted RBP4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 RFPL4BQ6ZWI9 263 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 VSTM2AQ8TAG5 236 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 CD300LFQ8TDQ1 290 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 MITD1Q8WV92 249 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 WDR89Q96FK6 387 aaPredicted RBP4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 BANF2Q9H503 90 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 ZNF446Q9NWS9 450 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 TAS2R8Q9NYW2 309 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 FAM215AQ9Y5M1 114 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 CDKN2AP42771 156 aaKnown RBP4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 ZNF343Q6P1L6 599 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 RELL2Q8NC24 303 aaPredicted RBP4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 LILRB1Q8NHL6 650 aaPredicted RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms