RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 RER1O15258 196 aa8.13□□□□□ -1.11
SYNPO2-204ENST00000448416 HNRNPA3P51991 378 aaKnown RBP8.13□□□□□ -1.11
SYNPO2-204ENST00000448416 MLF1P58340 268 aa8.13□□□□□ -1.11
SYNPO2-204ENST00000448416 RPS21P63220 83 aaKnown RBP8.13□□□□□ -1.11
SYNPO2-204ENST00000448416 OR8G2PQ6IF36 304 aa8.13□□□□□ -1.11
SYNPO2-204ENST00000448416 Q6ZN92 141 aa8.13□□□□□ -1.11
SYNPO2-204ENST00000448416 Q6ZVH6 145 aa8.13□□□□□ -1.11
SYNPO2-204ENST00000448416 TBC1D26Q86UD7 250 aa8.13□□□□□ -1.11
SYNPO2-204ENST00000448416 OR1E3Q8WZA6 343 aa8.13□□□□□ -1.11
SYNPO2-204ENST00000448416 BTF3L4Q96K17 158 aa8.13□□□□□ -1.11
SYNPO2-204ENST00000448416 SIGLEC12Q96PQ1 595 aa8.13□□□□□ -1.11
SYNPO2-204ENST00000448416 KLHL13Q9P2N7 655 aa8.13□□□□□ -1.11
SYNPO2-204ENST00000448416 RNF115Q9Y4L5 304 aa8.13□□□□□ -1.11
SYNPO2-204ENST00000448416 ARHGAP21Q5T5U3 1957 aa8.13□□□□□ -1.11
SYNPO2-204ENST00000448416 ANGPTL7O43827 346 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 CLPSP04118 112 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 CDAP32320 146 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 NPBWR2P48146 333 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 PAX9P55771 341 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 SUMO1P63165 101 aaKnown RBP8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 H1FNTQ75WM6 255 aaPredicted RBP8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 MYPOPQ86VE0 399 aaPredicted RBP8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 OOSP2Q86WS3 158 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 OR14C36Q8NHC7 312 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 TSACCQ96A04 125 aaPredicted RBP8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 LOC105371242A0A075B767 164 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 OTOL1A6NHN0 477 aaPredicted RBP8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 HMGB3O15347 200 aaKnown RBP8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 PPYP01298 95 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 CCL1P22362 96 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 S100A7P31151 101 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 ADMP35318 185 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 PPP1CAP62136 330 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 MSMO1Q15800 293 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 TMEM56Q96MV1 263 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 GPHA2Q96T91 129 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 WWTR1Q9GZV5 400 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 ZDHHC11Q9H8X9 412 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 UQCR10Q9UDW1 63 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 SLC45A2Q9UMX9 530 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 VDAC3Q9Y277 283 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 TMEM56-RWDD3S4R434 201 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 COL4A2P08572 1712 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 TRAV34A0A0B4J273 112 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 VDAC1P21796 283 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 VIPR2P41587 438 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 MAJINQ3KP22 176 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 SPATA45Q537H7 98 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 VHLLQ6RSH7 139 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 UNQ5815/PRO19632Q6UWF5 114 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 GCNT2Q8N0V5 402 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 APH1AQ96BI3 265 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 PTRH2Q9Y3E5 179 aaKnown RBP8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 TMEM131Q92545 1883 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 C5orf63A6NC05 138 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 MANSC4A6NHS7 340 aaPredicted RBP8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 KRTDAPP60985 99 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 RPS18P62269 152 aaKnown RBP8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 SERF2P84101 59 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 CLEC2AQ6UVW9 174 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 TCF23Q7RTU1 214 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 NUDT10Q8NFP7 164 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 PATE1Q8WXA2 126 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 PSMG3Q9BT73 122 aaPredicted RBP8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 ZBP1Q9H171 429 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 ZNF160Q9HCG1 818 aa8.12□□□□□ -1.11
SYNPO2-204ENST00000448416 ADAMTS9Q9P2N4 1935 aa8.11□□□□□ -1.11
SYNPO2-204ENST00000448416 OR2J2O76002 312 aa8.11□□□□□ -1.11
SYNPO2-204ENST00000448416 PINX1Q96BK5 328 aaKnown RBP8.11□□□□□ -1.11
SYNPO2-204ENST00000448416 RNF24Q9Y225 148 aa8.11□□□□□ -1.11
SYNPO2-204ENST00000448416 LAMA2P24043 3122 aaKnown RBP8.11□□□□□ -1.11
SYNPO2-204ENST00000448416 E9PLN8 166 aa8.11□□□□□ -1.11
SYNPO2-204ENST00000448416 TSPAN2O60636 221 aa8.11□□□□□ -1.11
SYNPO2-204ENST00000448416 SERF1AO75920 110 aa8.11□□□□□ -1.11
SYNPO2-204ENST00000448416 SYNGR4O95473 234 aa8.11□□□□□ -1.11
SYNPO2-204ENST00000448416 POU2F2P09086 479 aa8.11□□□□□ -1.11
SYNPO2-204ENST00000448416 ZNF157P51786 506 aaPredicted RBP8.11□□□□□ -1.11
SYNPO2-204ENST00000448416 CLDN17P56750 224 aa8.11□□□□□ -1.11
SYNPO2-204ENST00000448416 CLRN1P58418 232 aa8.11□□□□□ -1.11
SYNPO2-204ENST00000448416 DLX2Q07687 328 aaPredicted RBP8.11□□□□□ -1.11
SYNPO2-204ENST00000448416 ZP4Q12836 540 aa8.11□□□□□ -1.11
SYNPO2-204ENST00000448416 BAGE3Q86Y29 109 aa8.11□□□□□ -1.11
SYNPO2-204ENST00000448416 BAGE2Q86Y30 109 aa8.11□□□□□ -1.11
SYNPO2-204ENST00000448416 MMABQ96EY8 250 aaPredicted RBP8.11□□□□□ -1.11
SYNPO2-204ENST00000448416 COX11Q9Y6N1 276 aa8.11□□□□□ -1.11
SYNPO2-204ENST00000448416 ALG1L2C9J202 215 aa8.11□□□□□ -1.11
SYNPO2-204ENST00000448416 PPBPP02775 128 aa8.11□□□□□ -1.11
SYNPO2-204ENST00000448416 CRISP2P16562 243 aa8.11□□□□□ -1.11
SYNPO2-204ENST00000448416 UBE2G2P60604 165 aa8.11□□□□□ -1.11
SYNPO2-204ENST00000448416 ACSF3Q4G176 576 aaPredicted RBP8.11□□□□□ -1.11
SYNPO2-204ENST00000448416 MCEMP1Q8IX19 187 aa8.11□□□□□ -1.11
SYNPO2-204ENST00000448416 OR2D3Q8NGH3 330 aa8.11□□□□□ -1.11
SYNPO2-204ENST00000448416 RBM24Q9BX46 236 aaKnown RBP8.11□□□□□ -1.11
SYNPO2-204ENST00000448416 PIGLQ9Y2B2 252 aa8.11□□□□□ -1.11
SYNPO2-204ENST00000448416 DNAH14Q0VDD8 3507 aa8.11□□□□□ -1.11
SYNPO2-204ENST00000448416 FRG2CA6NGY1 282 aa8.1□□□□□ -1.11
SYNPO2-204ENST00000448416 DIRC3C9JPN6 131 aa8.1□□□□□ -1.11
SYNPO2-204ENST00000448416 M0QZ24 198 aa8.1□□□□□ -1.11
SYNPO2-204ENST00000448416 SPRY1O43609 319 aaPredicted RBP8.1□□□□□ -1.11
SYNPO2-204ENST00000448416 TOMM40O96008 361 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms