RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 NGFP01138 241 aa12.18□□□□□ -0.46
ERCC3-203ENST00000445889 METTL15P1P0C7V9 234 aa12.18□□□□□ -0.46
ERCC3-203ENST00000445889 COX6A1P12074 109 aa12.18□□□□□ -0.46
ERCC3-203ENST00000445889 UCP3P55916 312 aa12.18□□□□□ -0.46
ERCC3-203ENST00000445889 HLA-DRB3P79483 266 aa12.18□□□□□ -0.46
ERCC3-203ENST00000445889 TMEM42Q69YG0 159 aa12.18□□□□□ -0.46
ERCC3-203ENST00000445889 TMEM211Q6ICI0 200 aa12.18□□□□□ -0.46
ERCC3-203ENST00000445889 Q6ZSR3 168 aa12.18□□□□□ -0.46
ERCC3-203ENST00000445889 BEND4Q6ZU67 534 aa12.18□□□□□ -0.46
ERCC3-203ENST00000445889 NECAP1Q8NC96 275 aa12.18□□□□□ -0.46
ERCC3-203ENST00000445889 FAM210BQ96KR6 192 aa12.18□□□□□ -0.46
ERCC3-203ENST00000445889 GFOD1Q9NXC2 390 aa12.18□□□□□ -0.46
ERCC3-203ENST00000445889 TAAR3PQ9P1P4 343 aa12.18□□□□□ -0.46
ERCC3-203ENST00000445889 CHD3Q12873 2000 aaKnown RBP12.17□□□□□ -0.46
ERCC3-203ENST00000445889 ZNF816-ZNF321PA0A0X1KG74 233 aa12.17□□□□□ -0.46
ERCC3-203ENST00000445889 LILRA1O75019 489 aa12.17□□□□□ -0.46
ERCC3-203ENST00000445889 KLF7O75840 302 aaPredicted RBP12.17□□□□□ -0.46
ERCC3-203ENST00000445889 CD55P08174 381 aa12.17□□□□□ -0.46
ERCC3-203ENST00000445889 PGA5P0DJD9 388 aa12.17□□□□□ -0.46
ERCC3-203ENST00000445889 PSG2P11465 335 aa12.17□□□□□ -0.46
ERCC3-203ENST00000445889 TLE4Q04727 773 aa12.17□□□□□ -0.46
ERCC3-203ENST00000445889 ASCL4Q6XD76 172 aa12.17□□□□□ -0.46
ERCC3-203ENST00000445889 HIST3H2BBQ8N257 126 aa12.17□□□□□ -0.46
ERCC3-203ENST00000445889 IMMP1LQ96LU5 166 aa12.17□□□□□ -0.46
ERCC3-203ENST00000445889 RPRMQ9NS64 109 aa12.17□□□□□ -0.46
ERCC3-203ENST00000445889 MTCH1Q9NZJ7 389 aa12.17□□□□□ -0.46
ERCC3-203ENST00000445889 DNAJC13O75165 2243 aa12.17□□□□□ -0.46
ERCC3-203ENST00000445889 C5orf49A4QMS7 147 aa12.17□□□□□ -0.46
ERCC3-203ENST00000445889 SEC14L6B5MCN3 397 aa12.17□□□□□ -0.46
ERCC3-203ENST00000445889 HSPB1P04792 205 aaKnown RBP12.17□□□□□ -0.46
ERCC3-203ENST00000445889 ELLP55199 621 aaPredicted RBP12.17□□□□□ -0.46
ERCC3-203ENST00000445889 RAC3P60763 192 aa12.17□□□□□ -0.46
ERCC3-203ENST00000445889 C14orf144Q96I85 54 aa12.17□□□□□ -0.46
ERCC3-203ENST00000445889 SPIN2AQ99865 258 aa12.17□□□□□ -0.46
ERCC3-203ENST00000445889 SPIN2BQ9BPZ2 258 aa12.17□□□□□ -0.46
ERCC3-203ENST00000445889 PRRG4Q9BZD6 226 aa12.17□□□□□ -0.46
ERCC3-203ENST00000445889 SMOC1Q9H4F8 434 aa12.17□□□□□ -0.46
ERCC3-203ENST00000445889 SMDT1Q9H4I9 107 aa12.17□□□□□ -0.46
ERCC3-203ENST00000445889 ZNF716A6NP11 495 aa12.17□□□□□ -0.46
ERCC3-203ENST00000445889 CBR3O75828 277 aa12.17□□□□□ -0.46
ERCC3-203ENST00000445889 CNOT4O95628 575 aaKnown RBP12.17□□□□□ -0.46
ERCC3-203ENST00000445889 CST2P09228 141 aa12.17□□□□□ -0.46
ERCC3-203ENST00000445889 ARL16Q0P5N6 197 aa12.17□□□□□ -0.46
ERCC3-203ENST00000445889 NMSQ5H8A3 153 aa12.17□□□□□ -0.46
ERCC3-203ENST00000445889 ZNF506Q5JVG8 444 aa12.17□□□□□ -0.46
ERCC3-203ENST00000445889 WDR25Q64LD2 544 aaPredicted RBP12.17□□□□□ -0.46
ERCC3-203ENST00000445889 DNASE2BQ8WZ79 361 aa12.17□□□□□ -0.46
ERCC3-203ENST00000445889 GNPNAT1Q96EK6 184 aaPredicted RBP12.17□□□□□ -0.46
ERCC3-203ENST00000445889 Q9N2K0 584 aa12.17□□□□□ -0.46
ERCC3-203ENST00000445889 ERRFI1Q9UJM3 462 aaPredicted RBP12.17□□□□□ -0.46
ERCC3-203ENST00000445889 ZNF732B4DXR9 585 aa12.16□□□□□ -0.46
ERCC3-203ENST00000445889 RPL36A-HNRNPH2H7BZ11 118 aa12.16□□□□□ -0.46
ERCC3-203ENST00000445889 OTX2P32243 289 aa12.16□□□□□ -0.46
ERCC3-203ENST00000445889 ID3Q02535 119 aa12.16□□□□□ -0.46
ERCC3-203ENST00000445889 PRDX4Q13162 271 aa12.16□□□□□ -0.46
ERCC3-203ENST00000445889 GGNQ86UU5 652 aa12.16□□□□□ -0.46
ERCC3-203ENST00000445889 GPR146Q96CH1 333 aa12.16□□□□□ -0.46
ERCC3-203ENST00000445889 TMEM56Q96MV1 263 aa12.16□□□□□ -0.46
ERCC3-203ENST00000445889 ZNF552Q9H707 407 aaPredicted RBP12.16□□□□□ -0.46
ERCC3-203ENST00000445889 PPP1R3CQ9UQK1 317 aa12.16□□□□□ -0.46
ERCC3-203ENST00000445889 TMEM56-RWDD3S4R434 201 aa12.16□□□□□ -0.46
ERCC3-203ENST00000445889 A0A087WWC5 75 aa12.16□□□□□ -0.46
ERCC3-203ENST00000445889 BTBD17A6NE02 478 aa12.16□□□□□ -0.46
ERCC3-203ENST00000445889 ZNF503-AS2A6NEH8 195 aa12.16□□□□□ -0.46
ERCC3-203ENST00000445889 OR5H1A6NKK0 313 aa12.16□□□□□ -0.46
ERCC3-203ENST00000445889 PGLYRP1O75594 196 aaPredicted RBP12.16□□□□□ -0.46
ERCC3-203ENST00000445889 VDAC1P21796 283 aa12.16□□□□□ -0.46
ERCC3-203ENST00000445889 WDR5BQ86VZ2 330 aa12.16□□□□□ -0.46
ERCC3-203ENST00000445889 GPR35Q9HC97 309 aa12.16□□□□□ -0.46
ERCC3-203ENST00000445889 TRIOBPQ9H2D6 2365 aa12.16□□□□□ -0.46
ERCC3-203ENST00000445889 A0A087WZY1 265 aa12.15□□□□□ -0.46
ERCC3-203ENST00000445889 HIST1H1BP16401 226 aaKnown RBP12.15□□□□□ -0.46
ERCC3-203ENST00000445889 B3GALT5-AS1P59052 145 aa12.15□□□□□ -0.46
ERCC3-203ENST00000445889 SRPXP78539 464 aa12.15□□□□□ -0.46
ERCC3-203ENST00000445889 EXT1Q16394 746 aa12.15□□□□□ -0.46
ERCC3-203ENST00000445889 ZNF295-AS1Q8N0V1 137 aa12.15□□□□□ -0.46
ERCC3-203ENST00000445889 ATP5SQ99766 215 aa12.15□□□□□ -0.46
ERCC3-203ENST00000445889 OPA3Q9H6K4 179 aa12.15□□□□□ -0.46
ERCC3-203ENST00000445889 OR1A1Q9P1Q5 309 aa12.15□□□□□ -0.46
ERCC3-203ENST00000445889 LRFN1Q9P244 771 aa12.15□□□□□ -0.46
ERCC3-203ENST00000445889 PINLYPA6NC86 204 aa12.15□□□□□ -0.46
ERCC3-203ENST00000445889 TUBG1P23258 451 aa12.15□□□□□ -0.46
ERCC3-203ENST00000445889 FKBP2P26885 142 aaKnown RBP12.15□□□□□ -0.46
ERCC3-203ENST00000445889 HOXA4Q00056 320 aaPredicted RBP12.15□□□□□ -0.46
ERCC3-203ENST00000445889 SNIP1Q8TAD8 396 aaKnown RBP12.15□□□□□ -0.46
ERCC3-203ENST00000445889 SGCZQ96LD1 299 aa12.15□□□□□ -0.46
ERCC3-203ENST00000445889 DEPPQ9NTK1 212 aa12.15□□□□□ -0.46
ERCC3-203ENST00000445889 RNF115Q9Y4L5 304 aa12.15□□□□□ -0.46
ERCC3-203ENST00000445889 DEFA4P12838 97 aa12.14□□□□□ -0.47
ERCC3-203ENST00000445889 EPHA8P29322 1005 aaPredicted RBP12.14□□□□□ -0.47
ERCC3-203ENST00000445889 TAS2R30P59541 319 aa12.14□□□□□ -0.47
ERCC3-203ENST00000445889 ZNF726P1Q15940 193 aa12.14□□□□□ -0.47
ERCC3-203ENST00000445889 FAM53AQ6NSI3 398 aaPredicted RBP12.14□□□□□ -0.47
ERCC3-203ENST00000445889 SSX9Q7RTT3 188 aa12.14□□□□□ -0.47
ERCC3-203ENST00000445889 CPT1CQ8TCG5 803 aa12.14□□□□□ -0.47
ERCC3-203ENST00000445889 PHF7Q9BWX1 381 aaPredicted RBP12.14□□□□□ -0.47
ERCC3-203ENST00000445889 CACNG5Q9UF02 275 aa12.14□□□□□ -0.47
ERCC3-203ENST00000445889 KNTC1P50748 2209 aa12.14□□□□□ -0.47
ERCC3-203ENST00000445889 IFNA5P01569 189 aa12.14□□□□□ -0.47
ERCC3-203ENST00000445889 CFIP05156 583 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms