RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 PPYP01298 95 aa12.15□□□□□ -0.46
MCF2L-218ENST00000442625 PGA5P0DJD9 388 aa12.15□□□□□ -0.46
MCF2L-218ENST00000442625 MMP9P14780 707 aa12.15□□□□□ -0.46
MCF2L-218ENST00000442625 GNRHRP30968 328 aa12.15□□□□□ -0.46
MCF2L-218ENST00000442625 ARL6IP1Q15041 203 aa12.15□□□□□ -0.46
MCF2L-218ENST00000442625 CLEC12BQ2HXU8 276 aa12.15□□□□□ -0.46
MCF2L-218ENST00000442625 MOB3AQ96BX8 217 aa12.15□□□□□ -0.46
MCF2L-218ENST00000442625 BORCS8Q96FH0 119 aa12.15□□□□□ -0.46
MCF2L-218ENST00000442625 HS3ST6Q96QI5 342 aa12.15□□□□□ -0.46
MCF2L-218ENST00000442625 NIPSNAP3BQ9BS92 247 aa12.15□□□□□ -0.46
MCF2L-218ENST00000442625 SLC7A10Q9NS82 523 aa12.15□□□□□ -0.46
MCF2L-218ENST00000442625 WDFY4Q6ZS81 3184 aa12.15□□□□□ -0.46
MCF2L-218ENST00000442625 CHD3Q12873 2000 aaKnown RBP12.15□□□□□ -0.46
MCF2L-218ENST00000442625 IGHV5-10-1A0A0J9YXX1 117 aa12.15□□□□□ -0.47
MCF2L-218ENST00000442625 SEC14L6B5MCN3 397 aa12.15□□□□□ -0.47
MCF2L-218ENST00000442625 ZNF587BE7ETH6 402 aa12.15□□□□□ -0.47
MCF2L-218ENST00000442625 B4GALT1P15291 398 aa12.15□□□□□ -0.47
MCF2L-218ENST00000442625 FUT3P21217 361 aa12.15□□□□□ -0.47
MCF2L-218ENST00000442625 NTF4P34130 210 aa12.15□□□□□ -0.47
MCF2L-218ENST00000442625 ZNF695Q8IW36 515 aa12.15□□□□□ -0.47
MCF2L-218ENST00000442625 LRTM2Q8N967 370 aa12.15□□□□□ -0.47
MCF2L-218ENST00000442625 ZIC4Q8N9L1 334 aa12.15□□□□□ -0.47
MCF2L-218ENST00000442625 TVP23CQ96ET8 276 aa12.15□□□□□ -0.47
MCF2L-218ENST00000442625 SYT3Q9BQG1 590 aa12.15□□□□□ -0.47
MCF2L-218ENST00000442625 SRXN1Q9BYN0 137 aa12.15□□□□□ -0.47
MCF2L-218ENST00000442625 C11orf1Q9H5F2 150 aa12.15□□□□□ -0.47
MCF2L-218ENST00000442625 VSIRQ9H7M9 311 aa12.15□□□□□ -0.47
MCF2L-218ENST00000442625 OCIAD1Q9NX40 245 aa12.15□□□□□ -0.47
MCF2L-218ENST00000442625 LOC102725191A0A1B0GVB3 256 aa12.14□□□□□ -0.47
MCF2L-218ENST00000442625 RTL6Q6ICC9 239 aa12.14□□□□□ -0.47
MCF2L-218ENST00000442625 CALHM1Q8IU99 346 aa12.14□□□□□ -0.47
MCF2L-218ENST00000442625 MAML2Q8IZL2 1156 aaPredicted RBP12.14□□□□□ -0.47
MCF2L-218ENST00000442625 ALKBH3Q96Q83 286 aaPredicted RBP12.14□□□□□ -0.47
MCF2L-218ENST00000442625 IGKV1D-13A0A0B4J2D9 117 aa12.14□□□□□ -0.47
MCF2L-218ENST00000442625 A0A0J9YW62 118 aa12.14□□□□□ -0.47
MCF2L-218ENST00000442625 TRDCB7Z8K6 153 aa12.14□□□□□ -0.47
MCF2L-218ENST00000442625 TP53I11O14683 189 aa12.14□□□□□ -0.47
MCF2L-218ENST00000442625 CHST1O43916 411 aa12.14□□□□□ -0.47
MCF2L-218ENST00000442625 CA11O75493 328 aa12.14□□□□□ -0.47
MCF2L-218ENST00000442625 IGKV1-13P0DP09 117 aa12.14□□□□□ -0.47
MCF2L-218ENST00000442625 HIST1H1BP16401 226 aaKnown RBP12.14□□□□□ -0.47
MCF2L-218ENST00000442625 TMEM267Q0VDI3 215 aaPredicted RBP12.14□□□□□ -0.47
MCF2L-218ENST00000442625 MRPL49Q13405 166 aaKnown RBP12.14□□□□□ -0.47
MCF2L-218ENST00000442625 ZNF266Q14584 549 aa12.14□□□□□ -0.47
MCF2L-218ENST00000442625 ZNF818PQ6ZRF7 136 aa12.14□□□□□ -0.47
MCF2L-218ENST00000442625 THNSL2Q86YJ6 484 aa12.14□□□□□ -0.47
MCF2L-218ENST00000442625 CMTM1Q8IZ96 169 aa12.14□□□□□ -0.47
MCF2L-218ENST00000442625 OSR2Q8N2R0 312 aa12.14□□□□□ -0.47
MCF2L-218ENST00000442625 CLDND2Q8NHS1 167 aa12.14□□□□□ -0.47
MCF2L-218ENST00000442625 PIGCQ92535 297 aa12.14□□□□□ -0.47
MCF2L-218ENST00000442625 RSG1Q9BU20 258 aa12.14□□□□□ -0.47
MCF2L-218ENST00000442625 ZNF286AQ9HBT8 521 aa12.14□□□□□ -0.47
MCF2L-218ENST00000442625 KIAA1456Q9P272 454 aa12.14□□□□□ -0.47
MCF2L-218ENST00000442625 KIAA2026Q5HYC2 2103 aa12.14□□□□□ -0.47
MCF2L-218ENST00000442625 ZIC3O60481 467 aa12.13□□□□□ -0.47
MCF2L-218ENST00000442625 CD55P08174 381 aa12.13□□□□□ -0.47
MCF2L-218ENST00000442625 SCTP09683 121 aa12.13□□□□□ -0.47
MCF2L-218ENST00000442625 GLIPR1P48060 266 aa12.13□□□□□ -0.47
MCF2L-218ENST00000442625 HIST1H3AP68431 136 aa12.13□□□□□ -0.47
MCF2L-218ENST00000442625 AKR1C8PQ5T2L2 129 aa12.13□□□□□ -0.47
MCF2L-218ENST00000442625 HIST2H3PS2Q5TEC6 136 aa12.13□□□□□ -0.47
MCF2L-218ENST00000442625 LCN15Q6UWW0 184 aa12.13□□□□□ -0.47
MCF2L-218ENST00000442625 LHFPL4Q7Z7J7 247 aa12.13□□□□□ -0.47
MCF2L-218ENST00000442625 GAPTQ8N292 157 aa12.13□□□□□ -0.47
MCF2L-218ENST00000442625 ANGPTL4Q9BY76 406 aa12.13□□□□□ -0.47
MCF2L-218ENST00000442625 IL36RNQ9UBH0 155 aa12.13□□□□□ -0.47
MCF2L-218ENST00000442625 DKKL1Q9UK85 242 aa12.13□□□□□ -0.47
MCF2L-218ENST00000442625 TMED3Q9Y3Q3 217 aa12.13□□□□□ -0.47
MCF2L-218ENST00000442625 PITX3O75364 302 aa12.13□□□□□ -0.47
MCF2L-218ENST00000442625 DTYMKP23919 212 aa12.13□□□□□ -0.47
MCF2L-218ENST00000442625 DAZAP2Q15038 168 aaPredicted RBP12.13□□□□□ -0.47
MCF2L-218ENST00000442625 FGFBP3Q8TAT2 258 aa12.13□□□□□ -0.47
MCF2L-218ENST00000442625 FAM210BQ96KR6 192 aa12.13□□□□□ -0.47
MCF2L-218ENST00000442625 TMEM222Q9H0R3 208 aa12.13□□□□□ -0.47
MCF2L-218ENST00000442625 ZNF665Q9H7R5 613 aa12.13□□□□□ -0.47
MCF2L-218ENST00000442625 PLEKHF2Q9H8W4 249 aa12.13□□□□□ -0.47
MCF2L-218ENST00000442625 CLEC5AQ9NY25 188 aa12.13□□□□□ -0.47
MCF2L-218ENST00000442625 A0A1B0GW64 132 aa12.12□□□□□ -0.47
MCF2L-218ENST00000442625 OR5H1A6NKK0 313 aa12.12□□□□□ -0.47
MCF2L-218ENST00000442625 NRASP01111 189 aa12.12□□□□□ -0.47
MCF2L-218ENST00000442625 NPSP0C0P6 89 aa12.12□□□□□ -0.47
MCF2L-218ENST00000442625 CRYGSP22914 178 aa12.12□□□□□ -0.47
MCF2L-218ENST00000442625 RPS18P62269 152 aaKnown RBP12.12□□□□□ -0.47
MCF2L-218ENST00000442625 TRA2AQ13595 282 aaKnown RBP eCLIP12.12□□□□□ -0.47
MCF2L-218ENST00000442625 PCOLCEQ15113 449 aa12.12□□□□□ -0.47
MCF2L-218ENST00000442625 WDR25Q64LD2 544 aaPredicted RBP12.12□□□□□ -0.47
MCF2L-218ENST00000442625 SSX7Q7RTT5 188 aa12.12□□□□□ -0.47
MCF2L-218ENST00000442625 ZNF100Q8IYN0 542 aa12.12□□□□□ -0.47
MCF2L-218ENST00000442625 SELENOHQ8IZQ5 122 aaKnown RBP12.12□□□□□ -0.47
MCF2L-218ENST00000442625 NECAP1Q8NC96 275 aa12.12□□□□□ -0.47
MCF2L-218ENST00000442625 ZNF576Q9H609 170 aa12.12□□□□□ -0.47
MCF2L-218ENST00000442625 PROK2Q9HC23 129 aa12.12□□□□□ -0.47
MCF2L-218ENST00000442625 LYRM2Q9NU23 88 aaPredicted RBP12.12□□□□□ -0.47
MCF2L-218ENST00000442625 C19orf25Q9UFG5 118 aaPredicted RBP12.12□□□□□ -0.47
MCF2L-218ENST00000442625 MRPS18CQ9Y3D5 142 aaKnown RBP12.12□□□□□ -0.47
MCF2L-218ENST00000442625 A0A0G2JRQ6 117 aa12.12□□□□□ -0.47
MCF2L-218ENST00000442625 SYNGR3O43761 229 aa12.12□□□□□ -0.47
MCF2L-218ENST00000442625 CD200P41217 278 aa12.12□□□□□ -0.47
MCF2L-218ENST00000442625 SPSB1Q96BD6 273 aa12.12□□□□□ -0.47
MCF2L-218ENST00000442625 SNRPCP09234 159 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms