RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 MUC7Q8TAX7 377 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 PTX4Q96A99 478 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 SEH1LQ96EE3 360 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 DIRAS2Q96HU8 199 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 CEP19Q96LK0 163 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 CMTM3Q96MX0 182 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 ZNF48Q96MX3 618 aaPredicted RBP3.92□□□□□ -1.78
PTPN4-206ENST00000441089 OR2V2Q96R30 315 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 ABHD1Q96SE0 405 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 TBX15Q96SF7 602 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 NRIP2Q9BQI9 281 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 MRI1Q9BV20 369 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 TM2D1Q9BX74 207 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 MS4A7Q9GZW8 240 aaPredicted RBP3.92□□□□□ -1.78
PTPN4-206ENST00000441089 SLC22A4Q9H015 551 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 ZNF665Q9H7R5 613 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 NEK6Q9HC98 313 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 HES4Q9HCC6 221 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 DYNLRB1Q9NP97 96 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 UFSP2Q9NUQ7 469 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 C1orf123Q9NWV4 160 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 C1RLQ9NZP8 487 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 GHRLQ9UBU3 117 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 OPN4Q9UHM6 478 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 ELF5Q9UKW6 265 aaPredicted RBP3.92□□□□□ -1.78
PTPN4-206ENST00000441089 RAB22AQ9UL26 194 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 KCNK7Q9Y2U2 307 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 ETV7Q9Y603 341 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 CACNG2Q9Y698 323 aa3.92□□□□□ -1.78
PTPN4-206ENST00000441089 PPIAL4EA0A075B759 164 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 PPIAL4CA0A0B4J2A2 164 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 PLSCR5A0PG75 271 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 FABP12A6NFH5 140 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 A6NLC8 198 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 B5MCH6 92 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 DIRC3C9JPN6 131 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 PPIAL4DF5H284 164 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 LYNX1G3V0Z9 82 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.91□□□□□ -1.78
PTPN4-206ENST00000441089 K7EIL1 84 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 M0R233 179 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 GEMIN2O14893 280 aaKnown RBP3.91□□□□□ -1.78
PTPN4-206ENST00000441089 PPIHO43447 177 aaKnown RBP3.91□□□□□ -1.78
PTPN4-206ENST00000441089 AKR7A2O43488 359 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 XRCC3O43542 346 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 LANCL1O43813 399 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 NOS1APO75052 506 aaPredicted RBP3.91□□□□□ -1.78
PTPN4-206ENST00000441089 ACAA1P09110 424 aaPredicted RBP3.91□□□□□ -1.78
PTPN4-206ENST00000441089 UBBP0CG47 229 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 PPIAL4FP0DN26 164 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 LYNX1P0DP58 116 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 DUSP1P28562 367 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 CD40LGP29965 261 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 S100A5P33763 92 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 CFHR2P36980 270 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 MNDAP41218 407 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 CEBPDP49716 269 aaPredicted RBP3.91□□□□□ -1.78
PTPN4-206ENST00000441089 VEGFCP49767 419 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 SNU13P55769 128 aaKnown RBP3.91□□□□□ -1.78
PTPN4-206ENST00000441089 TMEM50BP56557 158 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 RBM11P57052 281 aaKnown RBP3.91□□□□□ -1.78
PTPN4-206ENST00000441089 PROK1P58294 105 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 SELENOVP59797 346 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 GMFBP60983 142 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 FGF12P61328 243 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 CCL8P80075 99 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 MRPS11P82912 194 aaKnown RBP3.91□□□□□ -1.78
PTPN4-206ENST00000441089 ZNF45Q02386 682 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 ZNF846Q147U1 533 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 RSU1Q15404 277 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 BAK1Q16611 211 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 ZNF260Q3ZCT1 412 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 RNASE12Q5GAN4 147 aaKnown RBP3.91□□□□□ -1.78
PTPN4-206ENST00000441089 NHLRC3Q5JS37 347 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 FAM201AQ5SY85 155 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 LCE1AQ5T7P2 110 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 ELP2Q6IA86 826 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 Q6P435 159 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 FAM131AQ6UXB0 335 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 MOGAT3Q86VF5 341 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 MKXQ8IYA7 352 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 OSR2Q8N2R0 312 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 FAM89BQ8N5H3 189 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 GCSAMQ8N6F7 178 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 SPERTQ8NA61 448 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 C19orf18Q8NEA5 215 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 OR51T1Q8NGJ9 327 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 LINC01006Q8NI28 216 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 KCNG3Q8TAE7 436 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 LRRC29Q8WV35 223 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 S100ZQ8WXG8 99 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 RAB40AQ8WXH6 277 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 DYRK2Q92630 601 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 RDH5Q92781 318 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 TRIM63Q969Q1 353 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 PHF21AQ96BD5 680 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 CPNE2Q96FN4 548 aaPredicted RBP3.91□□□□□ -1.78
PTPN4-206ENST00000441089 TMEM59Q9BXS4 323 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 SELENOIQ9C0D9 397 aa3.91□□□□□ -1.78
PTPN4-206ENST00000441089 WDR12Q9GZL7 423 aaKnown RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms