RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 FAHD2AQ96GK7 314 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 MRPL13Q9BYD1 178 aaKnown RBP5.07□□□□□ -1.6
PTPRR-204ENST00000440835 PRO1933Q9H354 126 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 PLEK2Q9NYT0 353 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 DUSP13Q9UII6 198 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 WIPI2Q9Y4P8 454 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 TRAV34A0A0B4J273 112 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 OR2AT4A6NND4 320 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 ZNF705EA8MWA4 302 aaPredicted RBP5.07□□□□□ -1.6
PTPRR-204ENST00000440835 CTDSPLO15194 276 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 MED6O75586 246 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 RNASE1P07998 156 aaKnown RBP5.07□□□□□ -1.6
PTPRR-204ENST00000440835 MMP7P09237 267 aaPredicted RBP5.07□□□□□ -1.6
PTPRR-204ENST00000440835 STAG3L2P0CL84 134 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 DTYMKP23919 212 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 ACKR3P25106 362 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 DCTDP32321 178 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 FXYD6P3P58550 94 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 RPL27P61353 136 aaKnown RBP5.07□□□□□ -1.6
PTPRR-204ENST00000440835 LSM6P62312 80 aaKnown RBP5.07□□□□□ -1.6
PTPRR-204ENST00000440835 CRMP1Q14194 572 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 SURF2Q15527 256 aaPredicted RBP5.07□□□□□ -1.6
PTPRR-204ENST00000440835 CARD17Q5XLA6 110 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 LEG1Q6P5S2 330 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 ZNF546Q86UE3 836 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 LSRQ86X29 649 aaPredicted RBP5.07□□□□□ -1.6
PTPRR-204ENST00000440835 ZCCHC24Q8N2G6 241 aaKnown RBP5.07□□□□□ -1.6
PTPRR-204ENST00000440835 OR10H4Q8NGA5 316 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 OR51G2Q8NGK0 314 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 C22orf15Q8WYQ4 148 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 DVL3Q92997 716 aaPredicted RBP5.07□□□□□ -1.6
PTPRR-204ENST00000440835 RASD2Q96D21 266 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 SLC5A7Q9GZV3 580 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 TXNIPQ9H3M7 391 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 GPN1Q9HCN4 374 aaPredicted RBP5.07□□□□□ -1.6
PTPRR-204ENST00000440835 SMCO4Q9NRQ5 59 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 MED29Q9NX70 200 aa5.07□□□□□ -1.6
PTPRR-204ENST00000440835 RCC2Q9P258 522 aaKnown RBP5.07□□□□□ -1.6
PTPRR-204ENST00000440835 PEF1Q9UBV8 284 aaKnown RBP5.07□□□□□ -1.6
PTPRR-204ENST00000440835 A0A1W2PPQ1 181 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 ANKRD61A6NGH8 418 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 C11orf98E9PRG8 122 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 LYNX1G3V0Z9 82 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 FGF16O43320 207 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 GLCEO94923 617 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 NDUFB6O95139 128 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 SLC2A10O95528 541 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 IGHA1P01876 353 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 SNRPCP09234 159 aaKnown RBP5.06□□□□□ -1.6
PTPRR-204ENST00000440835 LYNX1P0DP58 116 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 HLA-DOBP13765 273 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 HIST1H1BP16401 226 aaKnown RBP5.06□□□□□ -1.6
PTPRR-204ENST00000440835 HIST1H1CP16403 213 aaKnown RBP5.06□□□□□ -1.6
PTPRR-204ENST00000440835 GUCA1AP43080 201 aaPredicted RBP5.06□□□□□ -1.6
PTPRR-204ENST00000440835 MAGEB1P43366 347 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 OR2B8PP59922 312 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 NUTF2P61970 127 aaKnown RBP5.06□□□□□ -1.6
PTPRR-204ENST00000440835 BDH1Q02338 343 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 GAMTQ14353 236 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 FAM27BQ5VT28 67 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 BAIAP2L2Q6UXY1 529 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 FAM220AQ7Z4H9 259 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 LRP11Q86VZ4 500 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 KCNRGQ8N5I3 272 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 TMEM86BQ8N661 226 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 ZDHHC22Q8N966 263 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 TMEM104Q8NE00 496 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 SDR9C7Q8NEX9 313 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 ZNF596Q8TC21 504 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 ASB10Q8WXI3 467 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 ISOC2Q96AB3 205 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 SLC25A38Q96DW6 304 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 NRIP2Q9BQI9 281 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 ATG101Q9BSB4 218 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 MRI1Q9BV20 369 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 EMC6Q9BV81 110 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 TPPP3Q9BW30 176 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 ZNF471Q9BX82 626 aaPredicted RBP5.06□□□□□ -1.6
PTPRR-204ENST00000440835 CHST5Q9GZS9 411 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 PLEKHA1Q9HB21 404 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 TRIM36Q9NQ86 728 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 GFOD1Q9NXC2 390 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 TMEM14AQ9Y6G1 99 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 FAM183AA6NL82 134 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 OR2T7P0C7T2 308 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 SLC2A1P11166 492 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 KITLGP21583 273 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 SLC2A5P22732 501 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 PRTN3P24158 256 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 HSD11B1P28845 292 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 AP3S2P59780 193 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 ACTBP60709 375 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 GAGE1Q13065 139 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 PLA2G7Q13093 441 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 HNF4GQ14541 408 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 CEACAM19Q7Z692 300 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 SLC35F2Q8IXU6 374 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 CMTM4Q8IZR5 234 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 ZNF283Q8N7M2 679 aa5.06□□□□□ -1.6
PTPRR-204ENST00000440835 LRRC75AQ8NAA5 344 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 1363.8 ms