RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 ZNF808Q8N4W9 903 aaPredicted RBP12.69□□□□□ -0.38
CPSF7-205ENST00000439958 DMRTA2Q96SC8 542 aa12.69□□□□□ -0.38
CPSF7-205ENST00000439958 CCL28Q9NRJ3 127 aa12.69□□□□□ -0.38
CPSF7-205ENST00000439958 SFT2D2O95562 160 aa12.68□□□□□ -0.38
CPSF7-205ENST00000439958 IGHV1-46P01743 117 aa12.68□□□□□ -0.38
CPSF7-205ENST00000439958 CD3EP07766 207 aa12.68□□□□□ -0.38
CPSF7-205ENST00000439958 PRDX2P32119 198 aa12.68□□□□□ -0.38
CPSF7-205ENST00000439958 PMELP40967 661 aa12.68□□□□□ -0.38
CPSF7-205ENST00000439958 ASCL1P50553 236 aa12.68□□□□□ -0.38
CPSF7-205ENST00000439958 IFITM2Q01629 132 aa12.68□□□□□ -0.38
CPSF7-205ENST00000439958 OR2B11Q5JQS5 317 aa12.68□□□□□ -0.38
CPSF7-205ENST00000439958 LHFPL1Q86WI0 220 aa12.68□□□□□ -0.38
CPSF7-205ENST00000439958 GAPTQ8N292 157 aa12.68□□□□□ -0.38
CPSF7-205ENST00000439958 NINJ1Q92982 152 aa12.68□□□□□ -0.38
CPSF7-205ENST00000439958 WNK2Q9Y3S1 2297 aa12.68□□□□□ -0.38
CPSF7-205ENST00000439958 NAPSAO96009 420 aa12.68□□□□□ -0.38
CPSF7-205ENST00000439958 GNRHRP30968 328 aa12.68□□□□□ -0.38
CPSF7-205ENST00000439958 SSTR5P35346 364 aa12.68□□□□□ -0.38
CPSF7-205ENST00000439958 HERPUD1Q15011 391 aa12.68□□□□□ -0.38
CPSF7-205ENST00000439958 ADIPOQQ15848 244 aa12.68□□□□□ -0.38
CPSF7-205ENST00000439958 C9orf62Q8N4C0 152 aa12.68□□□□□ -0.38
CPSF7-205ENST00000439958 FAM169BQ8N8A8 192 aa12.68□□□□□ -0.38
CPSF7-205ENST00000439958 OR5M8Q8NGP6 311 aa12.68□□□□□ -0.38
CPSF7-205ENST00000439958 RCC2Q9P258 522 aaKnown RBP12.68□□□□□ -0.38
CPSF7-205ENST00000439958 ANAPC10Q9UM13 185 aa12.68□□□□□ -0.38
CPSF7-205ENST00000439958 WIPI2Q9Y4P8 454 aa12.68□□□□□ -0.38
CPSF7-205ENST00000439958 IGKV1D-13A0A0B4J2D9 117 aa12.68□□□□□ -0.38
CPSF7-205ENST00000439958 IGKV1-13P0DP09 117 aa12.68□□□□□ -0.38
CPSF7-205ENST00000439958 CEACAM6P40199 344 aa12.68□□□□□ -0.38
CPSF7-205ENST00000439958 SUPT4H1P63272 117 aaKnown RBP12.68□□□□□ -0.38
CPSF7-205ENST00000439958 ZNF546Q86UE3 836 aa12.68□□□□□ -0.38
CPSF7-205ENST00000439958 OR1L1Q8NH94 360 aa12.68□□□□□ -0.38
CPSF7-205ENST00000439958 SAP30LQ9HAJ7 183 aa12.68□□□□□ -0.38
CPSF7-205ENST00000439958 B8ZZF3 427 aa12.67□□□□□ -0.38
CPSF7-205ENST00000439958 GYPAP02724 150 aa12.67□□□□□ -0.38
CPSF7-205ENST00000439958 PSG2P11465 335 aa12.67□□□□□ -0.38
CPSF7-205ENST00000439958 LAMTOR1Q6IAA8 161 aa12.67□□□□□ -0.38
CPSF7-205ENST00000439958 PARP12Q9H0J9 701 aaKnown RBP12.67□□□□□ -0.38
CPSF7-205ENST00000439958 RASL12Q9NYN1 266 aa12.67□□□□□ -0.38
CPSF7-205ENST00000439958 TACC2O95359 2948 aa12.67□□□□□ -0.38
CPSF7-205ENST00000439958 IGKV1-6A0A0C4DH72 117 aa12.67□□□□□ -0.38
CPSF7-205ENST00000439958 TMEM30CPA0ZSE6 113 aa12.67□□□□□ -0.38
CPSF7-205ENST00000439958 TUSC2O75896 110 aa12.67□□□□□ -0.38
CPSF7-205ENST00000439958 ERVK11-1P61568 191 aa12.67□□□□□ -0.38
CPSF7-205ENST00000439958 HLA-DRB3P79483 266 aa12.67□□□□□ -0.38
CPSF7-205ENST00000439958 IAH1Q2TAA2 248 aaPredicted RBP12.67□□□□□ -0.38
CPSF7-205ENST00000439958 NHLRC3Q5JS37 347 aa12.67□□□□□ -0.38
CPSF7-205ENST00000439958 LY6G6FQ5SQ64 297 aa12.67□□□□□ -0.38
CPSF7-205ENST00000439958 GCSAMQ8N6F7 178 aa12.67□□□□□ -0.38
CPSF7-205ENST00000439958 THAP6Q8TBB0 222 aa12.67□□□□□ -0.38
CPSF7-205ENST00000439958 ARL11Q969Q4 196 aa12.67□□□□□ -0.38
CPSF7-205ENST00000439958 MFFQ9GZY8 342 aa12.67□□□□□ -0.38
CPSF7-205ENST00000439958 YLPM1P49750 1951 aaKnown RBP12.67□□□□□ -0.38
CPSF7-205ENST00000439958 IFNA21P01568 189 aa12.67□□□□□ -0.38
CPSF7-205ENST00000439958 GNLYP22749 145 aa12.67□□□□□ -0.38
CPSF7-205ENST00000439958 MECP2P51608 486 aaKnown RBP12.67□□□□□ -0.38
CPSF7-205ENST00000439958 LGALSLQ3ZCW2 172 aaPredicted RBP12.67□□□□□ -0.38
CPSF7-205ENST00000439958 LRRC46Q96FV0 321 aa12.67□□□□□ -0.38
CPSF7-205ENST00000439958 CCL13Q99616 98 aa12.67□□□□□ -0.38
CPSF7-205ENST00000439958 CISD1Q9NZ45 108 aaKnown RBP12.67□□□□□ -0.38
CPSF7-205ENST00000439958 A0A1B0GW55 424 aa12.66□□□□□ -0.38
CPSF7-205ENST00000439958 TMPRSS2O15393 492 aa12.66□□□□□ -0.38
CPSF7-205ENST00000439958 DUX4L2P0CJ85 424 aa12.66□□□□□ -0.38
CPSF7-205ENST00000439958 DUX4L3P0CJ86 424 aa12.66□□□□□ -0.38
CPSF7-205ENST00000439958 DUX4L4P0CJ87 422 aa12.66□□□□□ -0.38
CPSF7-205ENST00000439958 DUX4L5P0CJ88 424 aa12.66□□□□□ -0.38
CPSF7-205ENST00000439958 DUX4L6P0CJ89 424 aa12.66□□□□□ -0.38
CPSF7-205ENST00000439958 DUX4L7P0CJ90 424 aa12.66□□□□□ -0.38
CPSF7-205ENST00000439958 NDUFB7P17568 137 aa12.66□□□□□ -0.38
CPSF7-205ENST00000439958 TUBG1P23258 451 aa12.66□□□□□ -0.38
CPSF7-205ENST00000439958 DUX4L9Q6RFH8 374 aaPredicted RBP12.66□□□□□ -0.38
CPSF7-205ENST00000439958 LINC00596Q86U02 117 aa12.66□□□□□ -0.38
CPSF7-205ENST00000439958 CMTM1Q8IZ96 169 aa12.66□□□□□ -0.38
CPSF7-205ENST00000439958 Q8NFD4 153 aa12.66□□□□□ -0.38
CPSF7-205ENST00000439958 FAM234AQ9H0X4 552 aa12.66□□□□□ -0.38
CPSF7-205ENST00000439958 RIMS4Q9H426 269 aaPredicted RBP12.66□□□□□ -0.38
CPSF7-205ENST00000439958 OR2S2Q9NQN1 319 aa12.66□□□□□ -0.38
CPSF7-205ENST00000439958 TUBG2Q9NRH3 451 aa12.66□□□□□ -0.38
CPSF7-205ENST00000439958 DUX4Q9UBX2 424 aa12.66□□□□□ -0.38
CPSF7-205ENST00000439958 LSM5Q9Y4Y9 91 aaKnown RBP12.66□□□□□ -0.38
CPSF7-205ENST00000439958 GLAP06280 429 aa12.66□□□□□ -0.38
CPSF7-205ENST00000439958 EPHA1P21709 976 aa12.66□□□□□ -0.38
CPSF7-205ENST00000439958 ADORA2A-AS1P86434 159 aa12.66□□□□□ -0.38
CPSF7-205ENST00000439958 ZNF146Q15072 292 aa12.66□□□□□ -0.38
CPSF7-205ENST00000439958 CD177Q8N6Q3 437 aa12.66□□□□□ -0.38
CPSF7-205ENST00000439958 OR52L2PQ8NGH6 319 aa12.66□□□□□ -0.38
CPSF7-205ENST00000439958 GNG12Q9UBI6 72 aa12.66□□□□□ -0.38
CPSF7-205ENST00000439958 CTSDP07339 412 aaPredicted RBP12.66□□□□□ -0.38
CPSF7-205ENST00000439958 ZNF818PQ6ZRF7 136 aa12.66□□□□□ -0.38
CPSF7-205ENST00000439958 C1orf174Q8IYL3 243 aa12.66□□□□□ -0.38
CPSF7-205ENST00000439958 OR8H3Q8N146 312 aa12.66□□□□□ -0.38
CPSF7-205ENST00000439958 DCUN1D4Q92564 292 aa12.66□□□□□ -0.38
CPSF7-205ENST00000439958 PRORYQ9H606 182 aa12.66□□□□□ -0.38
CPSF7-205ENST00000439958 GCM1Q9NP62 436 aa12.66□□□□□ -0.38
CPSF7-205ENST00000439958 MBD2Q9UBB5 411 aa12.66□□□□□ -0.38
CPSF7-205ENST00000439958 PPP1CCP36873 323 aaKnown RBP12.65□□□□□ -0.38
CPSF7-205ENST00000439958 SEZ6L2Q6UXD5 910 aa12.65□□□□□ -0.38
CPSF7-205ENST00000439958 MOB3AQ96BX8 217 aa12.65□□□□□ -0.38
CPSF7-205ENST00000439958 RNF7Q9UBF6 113 aa12.65□□□□□ -0.38
CPSF7-205ENST00000439958 LYNX1G3V0Z9 82 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms