RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 ING3Q9NXR8 418 aa15.15■□□□□ 0.02
HDAC6-208ENST00000438518 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.15■□□□□ 0.02
HDAC6-208ENST00000438518 CREBBPQ92793 2442 aa15.14■□□□□ 0.01
HDAC6-208ENST00000438518 ZNF469Q96JG9 3925 aaPredicted RBP15.14■□□□□ 0.01
HDAC6-208ENST00000438518 KBTBD11-OT1A0A1B0GTJ5 212 aa15.14■□□□□ 0.01
HDAC6-208ENST00000438518 FABP12A6NFH5 140 aa15.14■□□□□ 0.01
HDAC6-208ENST00000438518 CTDSPLO15194 276 aa15.14■□□□□ 0.01
HDAC6-208ENST00000438518 FCGR3AP08637 254 aa15.14■□□□□ 0.01
HDAC6-208ENST00000438518 CGB3P0DN86 165 aa15.14■□□□□ 0.01
HDAC6-208ENST00000438518 CGB7P0DN87 165 aa15.14■□□□□ 0.01
HDAC6-208ENST00000438518 PRSS3P35030 304 aa15.14■□□□□ 0.01
HDAC6-208ENST00000438518 ETV6P41212 452 aa15.14■□□□□ 0.01
HDAC6-208ENST00000438518 KIR2DS4P43632 304 aa15.14■□□□□ 0.01
HDAC6-208ENST00000438518 KIR2DS1Q14954 304 aa15.14■□□□□ 0.01
HDAC6-208ENST00000438518 SPANXN2Q5MJ10 180 aa15.14■□□□□ 0.01
HDAC6-208ENST00000438518 OLFML2AQ68BL7 652 aa15.14■□□□□ 0.01
HDAC6-208ENST00000438518 HEPN1Q6WQI6 88 aa15.14■□□□□ 0.01
HDAC6-208ENST00000438518 RTN4RL2Q86UN3 420 aa15.14■□□□□ 0.01
HDAC6-208ENST00000438518 IZUMO1Q8IYV9 350 aa15.14■□□□□ 0.01
HDAC6-208ENST00000438518 MRGPRDQ8TDS7 321 aa15.14■□□□□ 0.01
HDAC6-208ENST00000438518 UNKLQ9H9P5 680 aaKnown RBP15.14■□□□□ 0.01
HDAC6-208ENST00000438518 Q9N2K0 584 aa15.14■□□□□ 0.01
HDAC6-208ENST00000438518 ONECUT1Q9UBC0 465 aa15.14■□□□□ 0.01
HDAC6-208ENST00000438518 MRPS7Q9Y2R9 242 aaKnown RBP15.14■□□□□ 0.01
HDAC6-208ENST00000438518 NPIPB11E5RHQ5 1161 aa15.13■□□□□ 0.01
HDAC6-208ENST00000438518 SPINT2O43291 252 aa15.13■□□□□ 0.01
HDAC6-208ENST00000438518 DIRAS3O95661 229 aa15.13■□□□□ 0.01
HDAC6-208ENST00000438518 LPLP06858 475 aa15.13■□□□□ 0.01
HDAC6-208ENST00000438518 DLX6P56179 175 aa15.13■□□□□ 0.01
HDAC6-208ENST00000438518 ERVFRD-1P60508 538 aa15.13■□□□□ 0.01
HDAC6-208ENST00000438518 KRTAP1-1Q07627 177 aa15.13■□□□□ 0.01
HDAC6-208ENST00000438518 IL18Q14116 193 aa15.13■□□□□ 0.01
HDAC6-208ENST00000438518 HMGN3Q15651 99 aa15.13■□□□□ 0.01
HDAC6-208ENST00000438518 OR52W1Q6IF63 320 aa15.13■□□□□ 0.01
HDAC6-208ENST00000438518 CCDC190Q86UF4 302 aa15.13■□□□□ 0.01
HDAC6-208ENST00000438518 OCSTAMPQ9BR26 566 aa15.13■□□□□ 0.01
HDAC6-208ENST00000438518 TEX15Q9BXT5 2789 aa15.13■□□□□ 0.01
HDAC6-208ENST00000438518 SIRPDQ9H106 197 aa15.13■□□□□ 0.01
HDAC6-208ENST00000438518 CALYQ9NYX4 217 aa15.13■□□□□ 0.01
HDAC6-208ENST00000438518 AUP1Q9Y679 476 aa15.13■□□□□ 0.01
HDAC6-208ENST00000438518 MAP1AP78559 2803 aaPredicted RBP15.13■□□□□ 0.01
HDAC6-208ENST00000438518 TOX4O94842 621 aa15.12■□□□□ 0.01
HDAC6-208ENST00000438518 CCL3L1P16619 93 aa15.12■□□□□ 0.01
HDAC6-208ENST00000438518 PRTN3P24158 256 aa15.12■□□□□ 0.01
HDAC6-208ENST00000438518 ARF6P62330 175 aa15.12■□□□□ 0.01
HDAC6-208ENST00000438518 HLA-DRB3P79483 266 aa15.12■□□□□ 0.01
HDAC6-208ENST00000438518 NCR3LG1Q68D85 454 aa15.12■□□□□ 0.01
HDAC6-208ENST00000438518 FAM131AQ6UXB0 335 aa15.12■□□□□ 0.01
HDAC6-208ENST00000438518 OR52M1Q8NGK5 317 aa15.12■□□□□ 0.01
HDAC6-208ENST00000438518 SETD6Q8TBK2 473 aa15.12■□□□□ 0.01
HDAC6-208ENST00000438518 CCDC107Q8WV48 283 aa15.12■□□□□ 0.01
HDAC6-208ENST00000438518 NUDCD2Q8WVJ2 157 aa15.12■□□□□ 0.01
HDAC6-208ENST00000438518 SOSTQ9BQB4 213 aa15.12■□□□□ 0.01
HDAC6-208ENST00000438518 HDHD3Q9BSH5 251 aaPredicted RBP15.12■□□□□ 0.01
HDAC6-208ENST00000438518 C7orf69Q9H7B7 122 aa15.12■□□□□ 0.01
HDAC6-208ENST00000438518 TAF9BQ9HBM6 251 aa15.12■□□□□ 0.01
HDAC6-208ENST00000438518 ZNF286AQ9HBT8 521 aa15.12■□□□□ 0.01
HDAC6-208ENST00000438518 TMEM160Q9NX00 188 aa15.12■□□□□ 0.01
HDAC6-208ENST00000438518 FLNAP21333 2647 aaKnown RBP15.12■□□□□ 0.01
HDAC6-208ENST00000438518 C12orf77C9JDV5 145 aa15.11■□□□□ 0.01
HDAC6-208ENST00000438518 C15orf65H3BRN8 121 aa15.11■□□□□ 0.01
HDAC6-208ENST00000438518 GABARAPH6UMI1 98 aa15.11■□□□□ 0.01
HDAC6-208ENST00000438518 MMP9P14780 707 aa15.11■□□□□ 0.01
HDAC6-208ENST00000438518 RCC1P18754 421 aaPredicted RBP15.11■□□□□ 0.01
HDAC6-208ENST00000438518 SSBP1Q04837 148 aaKnown RBP15.11■□□□□ 0.01
HDAC6-208ENST00000438518 C17orf58Q2M2W7 97 aa15.11■□□□□ 0.01
HDAC6-208ENST00000438518 Q3ZCU0 254 aa15.11■□□□□ 0.01
HDAC6-208ENST00000438518 FAHD2BQ6P2I3 314 aaPredicted RBP15.11■□□□□ 0.01
HDAC6-208ENST00000438518 SNX29P2Q8IUI4 249 aa15.11■□□□□ 0.01
HDAC6-208ENST00000438518 C11orf42Q8N5U0 333 aa15.11■□□□□ 0.01
HDAC6-208ENST00000438518 GPX8Q8TED1 209 aa15.11■□□□□ 0.01
HDAC6-208ENST00000438518 ARL11Q969Q4 196 aa15.11■□□□□ 0.01
HDAC6-208ENST00000438518 UPRTQ96BW1 309 aa15.11■□□□□ 0.01
HDAC6-208ENST00000438518 FAHD2AQ96GK7 314 aa15.11■□□□□ 0.01
HDAC6-208ENST00000438518 TMPRSS13Q9BYE2 586 aa15.11■□□□□ 0.01
HDAC6-208ENST00000438518 IDI2-AS1Q9NZ38 188 aa15.11■□□□□ 0.01
HDAC6-208ENST00000438518 ELF5Q9UKW6 265 aaPredicted RBP15.11■□□□□ 0.01
HDAC6-208ENST00000438518 TRDCB7Z8K6 153 aa15.1■□□□□ 0.01
HDAC6-208ENST00000438518 F2RL2O00254 374 aa15.1■□□□□ 0.01
HDAC6-208ENST00000438518 SSX5O60225 188 aa15.1■□□□□ 0.01
HDAC6-208ENST00000438518 IGHV1-8P0DP01 117 aa15.1■□□□□ 0.01
HDAC6-208ENST00000438518 FPR2P25090 351 aa15.1■□□□□ 0.01
HDAC6-208ENST00000438518 SSTR5P35346 364 aa15.1■□□□□ 0.01
HDAC6-208ENST00000438518 ACTBP60709 375 aa15.1■□□□□ 0.01
HDAC6-208ENST00000438518 ACTG1P63261 375 aa15.1■□□□□ 0.01
HDAC6-208ENST00000438518 HTD2P86397 168 aa15.1■□□□□ 0.01
HDAC6-208ENST00000438518 ZNF45Q02386 682 aa15.1■□□□□ 0.01
HDAC6-208ENST00000438518 STEAP3Q658P3 488 aa15.1■□□□□ 0.01
HDAC6-208ENST00000438518 Q8N7P7 452 aa15.1■□□□□ 0.01
HDAC6-208ENST00000438518 DTX3Q8N9I9 347 aa15.1■□□□□ 0.01
HDAC6-208ENST00000438518 OR4A4PQ8NGN8 299 aa15.1■□□□□ 0.01
HDAC6-208ENST00000438518 FCAMRQ8WWV6 532 aa15.1■□□□□ 0.01
HDAC6-208ENST00000438518 S100ZQ8WXG8 99 aa15.1■□□□□ 0.01
HDAC6-208ENST00000438518 GALMQ96C23 342 aa15.1■□□□□ 0.01
HDAC6-208ENST00000438518 ABHD1Q96SE0 405 aa15.1■□□□□ 0.01
HDAC6-208ENST00000438518 IFT46Q9NQC8 304 aa15.1■□□□□ 0.01
HDAC6-208ENST00000438518 ANAPC10Q9UM13 185 aa15.1■□□□□ 0.01
HDAC6-208ENST00000438518 SESN1Q9Y6P5 492 aa15.1■□□□□ 0.01
HDAC6-208ENST00000438518 V9GYH0 126 aa15.1■□□□□ 0.01
HDAC6-208ENST00000438518 A0A087X0M5 115 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms