RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 IRF3Q14653 427 aa11.16□□□□□ -0.62
PTCH1-207ENST00000429896 ZBTB37Q5TC79 503 aa11.16□□□□□ -0.62
PTCH1-207ENST00000429896 CDH26Q8IXH8 852 aa11.16□□□□□ -0.62
PTCH1-207ENST00000429896 PDCD6O75340 191 aa11.16□□□□□ -0.62
PTCH1-207ENST00000429896 KRASP01116 189 aa11.16□□□□□ -0.62
PTCH1-207ENST00000429896 ADRA2CP18825 462 aa11.16□□□□□ -0.62
PTCH1-207ENST00000429896 NKX6-2Q9C056 277 aaPredicted RBP11.16□□□□□ -0.62
PTCH1-207ENST00000429896 ACTR3CQ9C0K3 210 aaPredicted RBP11.16□□□□□ -0.62
PTCH1-207ENST00000429896 G3V3Q6 166 aa11.16□□□□□ -0.62
PTCH1-207ENST00000429896 M0R1X1 148 aa11.16□□□□□ -0.62
PTCH1-207ENST00000429896 CECR9P0C854 216 aa11.16□□□□□ -0.62
PTCH1-207ENST00000429896 RFLNBQ8N5W9 214 aa11.16□□□□□ -0.62
PTCH1-207ENST00000429896 LRRC75AQ8NAA5 344 aa11.16□□□□□ -0.62
PTCH1-207ENST00000429896 ABHD14AQ9BUJ0 271 aa11.16□□□□□ -0.62
PTCH1-207ENST00000429896 LIN7CQ9NUP9 197 aaKnown RBP11.16□□□□□ -0.62
PTCH1-207ENST00000429896 OBSL1O75147 1896 aa11.16□□□□□ -0.62
PTCH1-207ENST00000429896 LOC102723971A0A1B0GUV8 181 aa11.16□□□□□ -0.62
PTCH1-207ENST00000429896 PPP5D1E7EU14 171 aa11.16□□□□□ -0.62
PTCH1-207ENST00000429896 CA7P43166 264 aa11.16□□□□□ -0.62
PTCH1-207ENST00000429896 KIR3DL2P43630 455 aa11.16□□□□□ -0.62
PTCH1-207ENST00000429896 PDZK1IP1Q13113 114 aa11.16□□□□□ -0.62
PTCH1-207ENST00000429896 HMGN3Q15651 99 aa11.16□□□□□ -0.62
PTCH1-207ENST00000429896 ACOT6Q3I5F7 207 aaPredicted RBP11.16□□□□□ -0.62
PTCH1-207ENST00000429896 TGIF2LYQ8IUE0 185 aa11.16□□□□□ -0.62
PTCH1-207ENST00000429896 SIGLECL1Q8N7X8 197 aa11.16□□□□□ -0.62
PTCH1-207ENST00000429896 TMEM88Q6PEY1 159 aa11.15□□□□□ -0.62
PTCH1-207ENST00000429896 RPEQ96AT9 228 aa11.15□□□□□ -0.62
PTCH1-207ENST00000429896 CMTM3Q96MX0 182 aa11.15□□□□□ -0.62
PTCH1-207ENST00000429896 TMEM208Q9BTX3 173 aa11.15□□□□□ -0.62
PTCH1-207ENST00000429896 GPR179Q6PRD1 2367 aa11.15□□□□□ -0.62
PTCH1-207ENST00000429896 PPP1R2P9O14990 202 aa11.15□□□□□ -0.62
PTCH1-207ENST00000429896 CEACAM6P40199 344 aa11.15□□□□□ -0.62
PTCH1-207ENST00000429896 KCNJ3P48549 501 aa11.15□□□□□ -0.62
PTCH1-207ENST00000429896 TAAR6Q96RI8 345 aa11.15□□□□□ -0.62
PTCH1-207ENST00000429896 AMELYQ99218 206 aa11.15□□□□□ -0.62
PTCH1-207ENST00000429896 ZNF320A2RRD8 509 aa11.15□□□□□ -0.62
PTCH1-207ENST00000429896 SULT1A3P0DMM9 295 aa11.15□□□□□ -0.62
PTCH1-207ENST00000429896 SULT1A4P0DMN0 295 aa11.15□□□□□ -0.62
PTCH1-207ENST00000429896 OR5H8P0DN80 308 aa11.15□□□□□ -0.62
PTCH1-207ENST00000429896 KLK2P20151 261 aa11.15□□□□□ -0.62
PTCH1-207ENST00000429896 PRR30Q53SZ7 412 aaPredicted RBP11.15□□□□□ -0.62
PTCH1-207ENST00000429896 TCEAL7Q9BRU2 100 aa11.15□□□□□ -0.62
PTCH1-207ENST00000429896 CA10Q9NS85 328 aa11.15□□□□□ -0.62
PTCH1-207ENST00000429896 CLEC18AA5D8T8 446 aa11.15□□□□□ -0.62
PTCH1-207ENST00000429896 SLC51BQ86UW2 128 aa11.15□□□□□ -0.62
PTCH1-207ENST00000429896 CLEC18CQ8NCF0 446 aa11.15□□□□□ -0.62
PTCH1-207ENST00000429896 OR1L4Q8NGR5 311 aa11.15□□□□□ -0.62
PTCH1-207ENST00000429896 ARHGAP5-AS1Q96IT6 56 aa11.15□□□□□ -0.62
PTCH1-207ENST00000429896 SLC25A22Q9H936 323 aa11.15□□□□□ -0.62
PTCH1-207ENST00000429896 ARHGEF17Q96PE2 2063 aaPredicted RBP11.15□□□□□ -0.63
PTCH1-207ENST00000429896 LOC102724200A0A096LPH7 203 aaPredicted RBP11.15□□□□□ -0.63
PTCH1-207ENST00000429896 SCGB1C2P0DMR2 95 aa11.15□□□□□ -0.63
PTCH1-207ENST00000429896 BPIFB3P59826 476 aa11.15□□□□□ -0.63
PTCH1-207ENST00000429896 FOXF2Q12947 444 aa11.15□□□□□ -0.63
PTCH1-207ENST00000429896 LHX4Q969G2 390 aa11.15□□□□□ -0.63
PTCH1-207ENST00000429896 ZNF716A6NP11 495 aa11.14□□□□□ -0.63
PTCH1-207ENST00000429896 FABP4P15090 132 aa11.14□□□□□ -0.63
PTCH1-207ENST00000429896 PMCHP20382 165 aa11.14□□□□□ -0.63
PTCH1-207ENST00000429896 CEACAM3P40198 252 aa11.14□□□□□ -0.63
PTCH1-207ENST00000429896 ERVFC1-1P60608 527 aa11.14□□□□□ -0.63
PTCH1-207ENST00000429896 LYG1Q8N1E2 194 aa11.14□□□□□ -0.63
PTCH1-207ENST00000429896 WIPI2Q9Y4P8 454 aa11.14□□□□□ -0.63
PTCH1-207ENST00000429896 HIST1H1DP16402 221 aaKnown RBP11.14□□□□□ -0.63
PTCH1-207ENST00000429896 ZBTB25P24278 435 aa11.14□□□□□ -0.63
PTCH1-207ENST00000429896 RPL12P30050 165 aaKnown RBP11.14□□□□□ -0.63
PTCH1-207ENST00000429896 SCAND1P57086 179 aa11.14□□□□□ -0.63
PTCH1-207ENST00000429896 TUSC1Q2TAM9 212 aa11.14□□□□□ -0.63
PTCH1-207ENST00000429896 MRGPRDQ8TDS7 321 aa11.14□□□□□ -0.63
PTCH1-207ENST00000429896 ADAT3Q96EY9 351 aaPredicted RBP11.14□□□□□ -0.63
PTCH1-207ENST00000429896 FAAP24Q9BTP7 215 aa11.14□□□□□ -0.63
PTCH1-207ENST00000429896 CLDN16Q9Y5I7 305 aa11.14□□□□□ -0.63
PTCH1-207ENST00000429896 EFNA2O43921 213 aa11.14□□□□□ -0.63
PTCH1-207ENST00000429896 FCGR3BO75015 233 aa11.14□□□□□ -0.63
PTCH1-207ENST00000429896 MMP7P09237 267 aaPredicted RBP11.14□□□□□ -0.63
PTCH1-207ENST00000429896 GLRXP35754 106 aa11.14□□□□□ -0.63
PTCH1-207ENST00000429896 SNAI3Q3KNW1 292 aa11.14□□□□□ -0.63
PTCH1-207ENST00000429896 CLEC9AQ6UXN8 241 aa11.14□□□□□ -0.63
PTCH1-207ENST00000429896 LINC00596Q86U02 117 aa11.14□□□□□ -0.63
PTCH1-207ENST00000429896 WFDC3Q8IUB2 231 aa11.14□□□□□ -0.63
PTCH1-207ENST00000429896 OR10AC1Q8NH08 325 aa11.14□□□□□ -0.63
PTCH1-207ENST00000429896 SLC25A21Q9BQT8 299 aaPredicted RBP11.14□□□□□ -0.63
PTCH1-207ENST00000429896 OR51I2Q9H344 312 aa11.14□□□□□ -0.63
PTCH1-207ENST00000429896 LPAR3Q9UBY5 353 aa11.14□□□□□ -0.63
PTCH1-207ENST00000429896 KCNAB3O43448 404 aa11.14□□□□□ -0.63
PTCH1-207ENST00000429896 GYPAP02724 150 aa11.14□□□□□ -0.63
PTCH1-207ENST00000429896 TAS2R45P59539 299 aa11.14□□□□□ -0.63
PTCH1-207ENST00000429896 ENDOGQ14249 297 aaKnown RBP11.14□□□□□ -0.63
PTCH1-207ENST00000429896 RSRP1Q9BUV0 290 aa11.14□□□□□ -0.63
PTCH1-207ENST00000429896 IGHV2OR16-5A0A0B4J2B6 119 aa11.14□□□□□ -0.63
PTCH1-207ENST00000429896 GATCO43716 136 aaKnown RBP11.14□□□□□ -0.63
PTCH1-207ENST00000429896 LYPD3O95274 346 aa11.14□□□□□ -0.63
PTCH1-207ENST00000429896 C6orf201Q7Z4U5 140 aa11.14□□□□□ -0.63
PTCH1-207ENST00000429896 NPAS1Q99742 590 aa11.14□□□□□ -0.63
PTCH1-207ENST00000429896 PLSCR4Q9NRQ2 329 aa11.14□□□□□ -0.63
PTCH1-207ENST00000429896 ST6GALNAC2Q9UJ37 374 aa11.14□□□□□ -0.63
PTCH1-207ENST00000429896 SLC25A10Q9UBX3 287 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-207ENST00000429896 KLK11Q9UBX7 282 aa11.13□□□□□ -0.63
PTCH1-207ENST00000429896 A0A1W2PPQ1 181 aa11.13□□□□□ -0.63
PTCH1-207ENST00000429896 AMTP48728 403 aa11.13□□□□□ -0.63
PTCH1-207ENST00000429896 RAB7AP51149 207 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms