RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 APOBEC3DQ96AK3 386 aaPredicted RBP11.39□□□□□ -0.59
SNRNP200-202ENST00000429650 FAM173AQ9BQD7 235 aa11.39□□□□□ -0.59
SNRNP200-202ENST00000429650 SLC25A31Q9H0C2 315 aa11.39□□□□□ -0.59
SNRNP200-202ENST00000429650 CCL28Q9NRJ3 127 aa11.39□□□□□ -0.59
SNRNP200-202ENST00000429650 ATP23Q9Y6H3 246 aa11.39□□□□□ -0.59
SNRNP200-202ENST00000429650 DUXBA0A1W2PPF3 345 aa11.39□□□□□ -0.59
SNRNP200-202ENST00000429650 A0A1W2PPH5 198 aa11.39□□□□□ -0.59
SNRNP200-202ENST00000429650 TRAPPC2LH3BP13 241 aa11.39□□□□□ -0.59
SNRNP200-202ENST00000429650 LAMTOR5O43504 91 aa11.39□□□□□ -0.59
SNRNP200-202ENST00000429650 SS18L1O75177 396 aaPredicted RBP11.39□□□□□ -0.59
SNRNP200-202ENST00000429650 NEURL1O76050 574 aa11.39□□□□□ -0.59
SNRNP200-202ENST00000429650 ODF1Q14990 250 aa11.39□□□□□ -0.59
SNRNP200-202ENST00000429650 ODF3L1Q8IXM7 274 aa11.39□□□□□ -0.59
SNRNP200-202ENST00000429650 MKXQ8IYA7 352 aa11.39□□□□□ -0.59
SNRNP200-202ENST00000429650 SIGLEC12Q96PQ1 595 aa11.39□□□□□ -0.59
SNRNP200-202ENST00000429650 TAAR9Q96RI9 348 aa11.39□□□□□ -0.59
SNRNP200-202ENST00000429650 ABHD14AQ9BUJ0 271 aa11.39□□□□□ -0.59
SNRNP200-202ENST00000429650 ZNF552Q9H707 407 aaPredicted RBP11.39□□□□□ -0.59
SNRNP200-202ENST00000429650 ZNF407Q9C0G0 2248 aa11.38□□□□□ -0.59
SNRNP200-202ENST00000429650 ARGFXA6NJG6 315 aa11.38□□□□□ -0.59
SNRNP200-202ENST00000429650 A6NLC8 198 aa11.38□□□□□ -0.59
SNRNP200-202ENST00000429650 GPR37O15354 613 aa11.38□□□□□ -0.59
SNRNP200-202ENST00000429650 SYNGR1O43759 233 aa11.38□□□□□ -0.59
SNRNP200-202ENST00000429650 TMEM50AO95807 157 aa11.38□□□□□ -0.59
SNRNP200-202ENST00000429650 NGFP01138 241 aa11.38□□□□□ -0.59
SNRNP200-202ENST00000429650 OR13C7P0DN81 318 aa11.38□□□□□ -0.59
SNRNP200-202ENST00000429650 VDAC1P21796 283 aa11.38□□□□□ -0.59
SNRNP200-202ENST00000429650 ACP1P24666 158 aa11.38□□□□□ -0.59
SNRNP200-202ENST00000429650 VAMP2P63027 116 aa11.38□□□□□ -0.59
SNRNP200-202ENST00000429650 ID3Q02535 119 aa11.38□□□□□ -0.59
SNRNP200-202ENST00000429650 RHEBQ15382 184 aa11.38□□□□□ -0.59
SNRNP200-202ENST00000429650 OR5C1Q8NGR4 320 aa11.38□□□□□ -0.59
SNRNP200-202ENST00000429650 PLPPR1Q8TBJ4 325 aa11.38□□□□□ -0.59
SNRNP200-202ENST00000429650 CD300LFQ8TDQ1 290 aa11.38□□□□□ -0.59
SNRNP200-202ENST00000429650 RARRES2Q99969 163 aa11.38□□□□□ -0.59
SNRNP200-202ENST00000429650 HES7Q9BYE0 225 aa11.38□□□□□ -0.59
SNRNP200-202ENST00000429650 GAB2Q9UQC2 676 aa11.38□□□□□ -0.59
SNRNP200-202ENST00000429650 LINC00587B1AMM8 73 aa11.38□□□□□ -0.59
SNRNP200-202ENST00000429650 EIF3GO75821 320 aaKnown RBP eCLIP11.38□□□□□ -0.59
SNRNP200-202ENST00000429650 CTXN2P0C2S0 81 aa11.38□□□□□ -0.59
SNRNP200-202ENST00000429650 AGAP20933 346 aa11.38□□□□□ -0.59
SNRNP200-202ENST00000429650 CCL20P78556 96 aa11.38□□□□□ -0.59
SNRNP200-202ENST00000429650 TMEM105Q8N8V8 129 aa11.38□□□□□ -0.59
SNRNP200-202ENST00000429650 ZFP62Q8NB50 900 aaPredicted RBP11.38□□□□□ -0.59
SNRNP200-202ENST00000429650 OR1J1Q8NGS3 322 aa11.38□□□□□ -0.59
SNRNP200-202ENST00000429650 KMT2EQ8IZD2 1858 aa11.38□□□□□ -0.59
SNRNP200-202ENST00000429650 DOCK7Q96N67 2140 aa11.37□□□□□ -0.59
SNRNP200-202ENST00000429650 C5orf52A6NGY3 159 aa11.37□□□□□ -0.59
SNRNP200-202ENST00000429650 CDRT15L2A8MXV6 281 aa11.37□□□□□ -0.59
SNRNP200-202ENST00000429650 CST7O76096 145 aa11.37□□□□□ -0.59
SNRNP200-202ENST00000429650 SPINK2P20155 84 aa11.37□□□□□ -0.59
SNRNP200-202ENST00000429650 SULT1A1P50225 295 aa11.37□□□□□ -0.59
SNRNP200-202ENST00000429650 SPSB3Q6PJ21 355 aa11.37□□□□□ -0.59
SNRNP200-202ENST00000429650 ZNF561Q8N587 486 aa11.37□□□□□ -0.59
SNRNP200-202ENST00000429650 OR5A2Q8NGI9 324 aa11.37□□□□□ -0.59
SNRNP200-202ENST00000429650 DNAJC13O75165 2243 aa11.37□□□□□ -0.59
SNRNP200-202ENST00000429650 H0Y980 276 aa11.37□□□□□ -0.59
SNRNP200-202ENST00000429650 HSPA12AO43301 675 aa11.37□□□□□ -0.59
SNRNP200-202ENST00000429650 TXNL1O43396 289 aa11.37□□□□□ -0.59
SNRNP200-202ENST00000429650 SYNGR4O95473 234 aa11.37□□□□□ -0.59
SNRNP200-202ENST00000429650 CNOT4O95628 575 aaKnown RBP11.37□□□□□ -0.59
SNRNP200-202ENST00000429650 DYNLT3P51808 116 aa11.37□□□□□ -0.59
SNRNP200-202ENST00000429650 RAB1AP62820 205 aa11.37□□□□□ -0.59
SNRNP200-202ENST00000429650 PCSK4Q6UW60 755 aa11.37□□□□□ -0.59
SNRNP200-202ENST00000429650 C20orf204Q6ZNR8 217 aa11.37□□□□□ -0.59
SNRNP200-202ENST00000429650 CMTM1Q8IZ96 169 aa11.37□□□□□ -0.59
SNRNP200-202ENST00000429650 SUMF2Q8NBJ7 301 aa11.37□□□□□ -0.59
SNRNP200-202ENST00000429650 OR8G5Q8NG78 346 aa11.37□□□□□ -0.59
SNRNP200-202ENST00000429650 OR5D13Q8NGL4 314 aa11.37□□□□□ -0.59
SNRNP200-202ENST00000429650 MRPL30Q8TCC3 161 aaKnown RBP11.37□□□□□ -0.59
SNRNP200-202ENST00000429650 POM121L2Q96KW2 1035 aa11.37□□□□□ -0.59
SNRNP200-202ENST00000429650 SMDT1Q9H4I9 107 aa11.37□□□□□ -0.59
SNRNP200-202ENST00000429650 B4GALT7Q9UBV7 327 aa11.37□□□□□ -0.59
SNRNP200-202ENST00000429650 CD300LBA8K4G0 201 aa11.36□□□□□ -0.59
SNRNP200-202ENST00000429650 TNFSF12O43508 249 aa11.36□□□□□ -0.59
SNRNP200-202ENST00000429650 NXPH3O95157 252 aa11.36□□□□□ -0.59
SNRNP200-202ENST00000429650 ARG1P05089 322 aa11.36□□□□□ -0.59
SNRNP200-202ENST00000429650 MMP9P14780 707 aa11.36□□□□□ -0.59
SNRNP200-202ENST00000429650 MAGEA5P43359 124 aa11.36□□□□□ -0.59
SNRNP200-202ENST00000429650 ZXDAP98168 799 aa11.36□□□□□ -0.59
SNRNP200-202ENST00000429650 BAXQ07812 192 aa11.36□□□□□ -0.59
SNRNP200-202ENST00000429650 EIF2S3LQ2VIR3 472 aaKnown RBP11.36□□□□□ -0.59
SNRNP200-202ENST00000429650 IL22RA1Q8N6P7 574 aa11.36□□□□□ -0.59
SNRNP200-202ENST00000429650 SNIP1Q8TAD8 396 aaKnown RBP11.36□□□□□ -0.59
SNRNP200-202ENST00000429650 GTF3AQ92664 365 aaKnown RBP11.36□□□□□ -0.59
SNRNP200-202ENST00000429650 ZNF488Q96MN9 340 aa11.36□□□□□ -0.59
SNRNP200-202ENST00000429650 HIST1H2AAQ96QV6 131 aa11.36□□□□□ -0.59
SNRNP200-202ENST00000429650 hCG_1809904A0A1W2PP81 198 aa11.36□□□□□ -0.59
SNRNP200-202ENST00000429650 A0A1W2PPE2 198 aa11.36□□□□□ -0.59
SNRNP200-202ENST00000429650 A0A1W2PR64 198 aa11.36□□□□□ -0.59
SNRNP200-202ENST00000429650 A0A1W2PRV1 198 aa11.36□□□□□ -0.59
SNRNP200-202ENST00000429650 FAM166BA8MTA8 275 aa11.36□□□□□ -0.59
SNRNP200-202ENST00000429650 SLC33A1O00400 549 aaPredicted RBP11.36□□□□□ -0.59
SNRNP200-202ENST00000429650 PGLYRP1O75594 196 aaPredicted RBP11.36□□□□□ -0.59
SNRNP200-202ENST00000429650 RAB5AP20339 215 aa11.36□□□□□ -0.59
SNRNP200-202ENST00000429650 EPHA1P21709 976 aa11.36□□□□□ -0.59
SNRNP200-202ENST00000429650 SOHLH1Q5JUK2 328 aa11.36□□□□□ -0.59
SNRNP200-202ENST00000429650 TMEM217Q8N7C4 229 aa11.36□□□□□ -0.59
SNRNP200-202ENST00000429650 OR5P3Q8WZ94 311 aa11.36□□□□□ -0.59
SNRNP200-202ENST00000429650 IL22RA2Q969J5 263 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms