RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 Q6ZPA2 131 aa6.54□□□□□ -1.36
HMGA1P4-201ENST00000428643 TCF23Q7RTU1 214 aa6.54□□□□□ -1.36
HMGA1P4-201ENST00000428643 HOGA1Q86XE5 327 aa6.54□□□□□ -1.36
HMGA1P4-201ENST00000428643 GAPTQ8N292 157 aa6.54□□□□□ -1.36
HMGA1P4-201ENST00000428643 ZNF565Q8N9K5 539 aa6.54□□□□□ -1.36
HMGA1P4-201ENST00000428643 MAPK1IP1LQ8NDC0 245 aa6.54□□□□□ -1.36
HMGA1P4-201ENST00000428643 BEST4Q8NFU0 473 aa6.54□□□□□ -1.36
HMGA1P4-201ENST00000428643 OR5H2Q8NGV7 314 aa6.54□□□□□ -1.36
HMGA1P4-201ENST00000428643 IL1F10Q8WWZ1 152 aa6.54□□□□□ -1.36
HMGA1P4-201ENST00000428643 ARL11Q969Q4 196 aa6.54□□□□□ -1.36
HMGA1P4-201ENST00000428643 ZNF714Q96N38 554 aa6.54□□□□□ -1.36
HMGA1P4-201ENST00000428643 SDHCQ99643 169 aaPredicted RBP6.54□□□□□ -1.36
HMGA1P4-201ENST00000428643 OCSTAMPQ9BR26 566 aa6.54□□□□□ -1.36
HMGA1P4-201ENST00000428643 GAL3ST2Q9H3Q3 398 aa6.54□□□□□ -1.36
HMGA1P4-201ENST00000428643 TAF9BQ9HBM6 251 aa6.54□□□□□ -1.36
HMGA1P4-201ENST00000428643 Q9N2K0 584 aa6.54□□□□□ -1.36
HMGA1P4-201ENST00000428643 RAB9BQ9NP90 201 aa6.54□□□□□ -1.36
HMGA1P4-201ENST00000428643 CALYQ9NYX4 217 aa6.54□□□□□ -1.36
HMGA1P4-201ENST00000428643 ONECUT1Q9UBC0 465 aa6.54□□□□□ -1.36
HMGA1P4-201ENST00000428643 KLK11Q9UBX7 282 aa6.54□□□□□ -1.36
HMGA1P4-201ENST00000428643 MTFP1Q9UDX5 166 aa6.54□□□□□ -1.36
HMGA1P4-201ENST00000428643 MGAT4AQ9UM21 535 aa6.54□□□□□ -1.36
HMGA1P4-201ENST00000428643 UBE2J1Q9Y385 318 aaPredicted RBP6.54□□□□□ -1.36
HMGA1P4-201ENST00000428643 RBMX2Q9Y388 322 aaKnown RBP6.54□□□□□ -1.36
HMGA1P4-201ENST00000428643 LINC00312Q9Y6C7 94 aa6.54□□□□□ -1.36
HMGA1P4-201ENST00000428643 TEP1Q99973 2627 aaKnown RBP6.54□□□□□ -1.36
HMGA1P4-201ENST00000428643 CSMD1Q96PZ7 3565 aa6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 IGKV1D-8A0A087WSZ0 117 aa6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 PPIAL4CA0A0B4J2A2 164 aa6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 IGHV2-70DA0A0C4DH43 119 aa6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 A0A1W2PPH5 198 aa6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 POM121CA8CG34 1229 aa6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 SMAD7O15105 426 aaKnown RBP6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 LANCL1O43813 399 aa6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 ORC5O43913 435 aa6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 UPK1BO75841 260 aa6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 LIPFP07098 398 aa6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 MSMBP08118 114 aa6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 ZNF728P0DKX0 622 aa6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 PPIAL4GP0DN37 164 aa6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 CCL3L1P16619 93 aa6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 ZFP36P26651 326 aaKnown RBP6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 OR3A3P47888 321 aa6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 TAS2R19P59542 299 aa6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 SSBP1Q04837 148 aaKnown RBP6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 LOXL1Q08397 574 aaPredicted RBP6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 HMGN3Q15651 99 aa6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 BAK1Q16611 211 aa6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 LTC4SQ16873 150 aa6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 ACTBL2Q562R1 376 aa6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 RNASE10Q5GAN6 216 aaKnown RBP6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 PRAMEF5Q5TYX0 476 aa6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 TMEM200BQ69YZ2 307 aa6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 ZNF880Q6PDB4 577 aa6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 C16orf87Q6PH81 154 aa6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 BTNL3Q6UXE8 466 aa6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 TOMM5Q8N4H5 51 aa6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 OR4A4PQ8NGN8 299 aa6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 OR1L1Q8NH94 360 aa6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 RFESDQ8TAC1 157 aa6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 SNAPC3Q92966 411 aa6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 BORCS5Q969J3 196 aa6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 KIRREL1Q96J84 757 aa6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 NCOR1P1Q9H4R4 102 aa6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 MBNL3Q9NUK0 354 aaKnown RBP6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 TAS2R8Q9NYW2 309 aa6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 EHFQ9NZC4 300 aa6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 ANXA10Q9UJ72 324 aa6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 ANAPC10Q9UM13 185 aa6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 CHD3Q12873 2000 aaKnown RBP6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 CCDC168Q8NDH2 2452 aa6.53□□□□□ -1.36
HMGA1P4-201ENST00000428643 A0A096LNT2 108 aa6.52□□□□□ -1.37
HMGA1P4-201ENST00000428643 KBTBD11-OT1A0A1B0GTJ5 212 aa6.52□□□□□ -1.37
HMGA1P4-201ENST00000428643 hCG_1809904A0A1W2PP81 198 aa6.52□□□□□ -1.37
HMGA1P4-201ENST00000428643 A0A1W2PPE2 198 aa6.52□□□□□ -1.37
HMGA1P4-201ENST00000428643 A0A1W2PR64 198 aa6.52□□□□□ -1.37
HMGA1P4-201ENST00000428643 A0A1W2PRV1 198 aa6.52□□□□□ -1.37
HMGA1P4-201ENST00000428643 ZNF729A6NN14 1252 aaPredicted RBP6.52□□□□□ -1.37
HMGA1P4-201ENST00000428643 B4DSR2 109 aa6.52□□□□□ -1.37
HMGA1P4-201ENST00000428643 M0QYG6 137 aa6.52□□□□□ -1.37
HMGA1P4-201ENST00000428643 SDCBPO00560 298 aaPredicted RBP6.52□□□□□ -1.37
HMGA1P4-201ENST00000428643 BET1O15155 118 aa6.52□□□□□ -1.37
HMGA1P4-201ENST00000428643 HSPA12AO43301 675 aa6.52□□□□□ -1.37
HMGA1P4-201ENST00000428643 RAB3DO95716 219 aa6.52□□□□□ -1.37
HMGA1P4-201ENST00000428643 HBZP02008 142 aa6.52□□□□□ -1.37
HMGA1P4-201ENST00000428643 PMP2P02689 132 aa6.52□□□□□ -1.37
HMGA1P4-201ENST00000428643 CD3DP04234 171 aa6.52□□□□□ -1.37
HMGA1P4-201ENST00000428643 SCTP09683 121 aa6.52□□□□□ -1.37
HMGA1P4-201ENST00000428643 GSTT2P0CG29 244 aa6.52□□□□□ -1.37
HMGA1P4-201ENST00000428643 TBPP20226 339 aa6.52□□□□□ -1.37
HMGA1P4-201ENST00000428643 OMGP23515 440 aa6.52□□□□□ -1.37
HMGA1P4-201ENST00000428643 NFYBP25208 207 aa6.52□□□□□ -1.37
HMGA1P4-201ENST00000428643 HRH1P35367 487 aa6.52□□□□□ -1.37
HMGA1P4-201ENST00000428643 FAUP35544 74 aaKnown RBP6.52□□□□□ -1.37
HMGA1P4-201ENST00000428643 CDK10Q15131 360 aa6.52□□□□□ -1.37
HMGA1P4-201ENST00000428643 C11orf91Q3C1V1 193 aa6.52□□□□□ -1.37
HMGA1P4-201ENST00000428643 STEAP1BQ6NZ63 245 aa6.52□□□□□ -1.37
HMGA1P4-201ENST00000428643 Q6ZS49 121 aa6.52□□□□□ -1.37
HMGA1P4-201ENST00000428643 C5orf24Q7Z6I8 188 aa6.52□□□□□ -1.37
HMGA1P4-201ENST00000428643 ZNF554Q86TJ5 538 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms